RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 ICAM2P13598 275 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 ATP1B2P14415 290 aaPredicted RBP2.21□□□□□ -2.06
RFC4-211ENST00000460408 CMA1P23946 247 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 CD1CP29017 333 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 BTCP35070 178 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 RDXP35241 583 aaKnown RBP2.21□□□□□ -2.06
RFC4-211ENST00000460408 YAP1P46937 504 aaKnown RBP2.21□□□□□ -2.06
RFC4-211ENST00000460408 ZNF133P52736 654 aaPredicted RBP2.21□□□□□ -2.06
RFC4-211ENST00000460408 CDH4P55283 916 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 UNC119Q13432 240 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 GK3PQ14409 553 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 GNMTQ14749 295 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 GPR157Q5UAW9 335 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 ZNF620Q6ZNG0 422 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 PAQR7Q86WK9 346 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 SLC34A3Q8N130 599 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 FAM71E2Q8N5Q1 922 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 ZNF433Q8N7K0 673 aaPredicted RBP2.21□□□□□ -2.06
RFC4-211ENST00000460408 TPRX1Q8N7U7 411 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 ACOT4Q8N9L9 421 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 DOT1LQ8TEK3 1739 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 CNN2Q99439 309 aaKnown RBP2.21□□□□□ -2.06
RFC4-211ENST00000460408 RASL11BQ9BPW5 248 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 CHRDL1Q9BU40 450 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 GCOM2Q9BZD3 368 aaPredicted RBP2.21□□□□□ -2.06
RFC4-211ENST00000460408 IL26Q9NPH9 171 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 ZNF225Q9UK10 706 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 NEU3Q9UQ49 428 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 PEX16Q9Y5Y5 336 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 TAF1LQ8IZX4 1826 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 NSD2O96028 1365 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 RLFQ13129 1914 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 KMT2BQ9UMN6 2715 aaPredicted RBP2.2□□□□□ -2.06
RFC4-211ENST00000460408 USP9XQ93008 2570 aaPredicted RBP2.2□□□□□ -2.06
RFC4-211ENST00000460408 SYNJ2BP-COX16A0A087WUM0 186 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 A0A0G2JN53 185 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 A0A0U1RQS6 177 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 ARHGEF35A5YM69 484 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 BTBD17A6NE02 478 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 TRIM49D1C9J1S8 452 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 TNFSF13O75888 250 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 OR7A10O76100 309 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 C1orf105O95561 183 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 FGF1P05230 155 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 TDGF1P13385 188 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 FDFT1P37268 417 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 VHLP40337 213 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 EPS15P42566 896 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 TDGF1P3P51864 188 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 ACVR1Q04771 509 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 PPIL2Q13356 520 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 DDX39BQ13838 428 aaKnown RBP2.2□□□□□ -2.06
RFC4-211ENST00000460408 KIAA0087Q14695 138 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 ZMYND11Q15326 602 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 CYTH1Q15438 398 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 MPPED2Q15777 294 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 BOLA3Q53S33 107 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 C6orf89Q6UWU4 347 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 SLC25A48Q6ZT89 311 aaKnown RBP2.2□□□□□ -2.06
RFC4-211ENST00000460408 EGFL6Q8IUX8 553 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 TMEM61Q8N0U2 210 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 RNF175Q8N4F7 328 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 NPBQ8NG41 125 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 FANK1Q8TC84 345 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 BLOC1S5Q8TDH9 187 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 PYROXD1Q8WU10 500 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 NDRG1Q92597 394 aaKnown RBP2.2□□□□□ -2.06
RFC4-211ENST00000460408 ZNF799Q96GE5 643 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 OR2M2Q96R28 347 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 PANX2Q96RD6 677 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 FMO2Q99518 471 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 RANBP3Q9H6Z4 567 aaPredicted RBP2.2□□□□□ -2.06
RFC4-211ENST00000460408 SIAEQ9HAT2 523 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 ZNF331Q9NQX6 463 aaPredicted RBP2.2□□□□□ -2.06
RFC4-211ENST00000460408 KCNIP1Q9NZI2 227 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 XCL2Q9UBD3 114 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 MMP17Q9ULZ9 603 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 NPTNQ9Y639 398 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 NUP155O75694 1391 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 PHF3Q92576 2039 aaKnown RBP2.2□□□□□ -2.06
RFC4-211ENST00000460408 TOGARAM1Q9Y4F4 1720 aa2.2□□□□□ -2.06
RFC4-211ENST00000460408 FANCIQ9NVI1 1328 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 PIK3C2GO75747 1445 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 DAPK1P53355 1430 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 A0A1B0GUA9 196 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 CCDC182A6NF36 153 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 GOLGA8SH3BPF8 625 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 PALMO75781 387 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 MMP1P03956 469 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 PSG2P11465 335 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 CRISP2P16562 243 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 MX1P20591 662 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 FMO3P31513 532 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 NPBWR2P48146 333 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 SH3BGRP55822 239 aaPredicted RBP2.19□□□□□ -2.06
RFC4-211ENST00000460408 IRX3P78415 501 aaPredicted RBP2.19□□□□□ -2.06
RFC4-211ENST00000460408 BST1Q10588 318 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 MRPL28Q13084 256 aaKnown RBP2.19□□□□□ -2.06
RFC4-211ENST00000460408 TGIF2LXQ8IUE1 241 aa2.19□□□□□ -2.06
RFC4-211ENST00000460408 PSTKQ8IV42 348 aaKnown RBP2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms