RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 GATSQ8NAP1 163 aa8□□□□□ -1.13
HDAC3-202ENST00000459727 PLPP5Q8NEB5 264 aa8□□□□□ -1.13
HDAC3-202ENST00000459727 OR52N5Q8NH56 324 aa8□□□□□ -1.13
HDAC3-202ENST00000459727 SMAP2Q8WU79 429 aaPredicted RBP8□□□□□ -1.13
HDAC3-202ENST00000459727 TAAR8Q969N4 342 aa8□□□□□ -1.13
HDAC3-202ENST00000459727 OMA1Q96E52 524 aa8□□□□□ -1.13
HDAC3-202ENST00000459727 KTI12Q96EK9 354 aaPredicted RBP8□□□□□ -1.13
HDAC3-202ENST00000459727 SLC41A2Q96JW4 573 aa8□□□□□ -1.13
HDAC3-202ENST00000459727 OR2A7Q96R45 310 aa8□□□□□ -1.13
HDAC3-202ENST00000459727 GAL3ST4Q96RP7 486 aa8□□□□□ -1.13
HDAC3-202ENST00000459727 GFI1Q99684 422 aa8□□□□□ -1.13
HDAC3-202ENST00000459727 NUDT16L1Q9BRJ7 211 aaKnown RBP8□□□□□ -1.13
HDAC3-202ENST00000459727 SYT4Q9H2B2 425 aa8□□□□□ -1.13
HDAC3-202ENST00000459727 SRA1Q9HD15 236 aaKnown RBP8□□□□□ -1.13
HDAC3-202ENST00000459727 MYOZ1Q9NP98 299 aaPredicted RBP8□□□□□ -1.13
HDAC3-202ENST00000459727 MGAT4CQ9UBM8 478 aa8□□□□□ -1.13
HDAC3-202ENST00000459727 EIF3KQ9UBQ5 218 aaKnown RBP8□□□□□ -1.13
HDAC3-202ENST00000459727 KCNG2Q9UJ96 466 aa8□□□□□ -1.13
HDAC3-202ENST00000459727 B9D1Q9UPM9 204 aa8□□□□□ -1.13
HDAC3-202ENST00000459727 SESN1Q9Y6P5 492 aa8□□□□□ -1.13
HDAC3-202ENST00000459727 TMEM131Q92545 1883 aa8□□□□□ -1.13
HDAC3-202ENST00000459727 NCOR1O75376 2440 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 TMED7-TICAM2A0A0A6YYA0 188 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 A0A0B4J203 849 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 A6NL46 340 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 RFXAPO00287 272 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 ZNF208O43345 1280 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 AKR7A2O43488 359 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 TSC22D2O75157 780 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 NPIPB7O75200 414 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 CTAG2O75638 210 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 AQP8O94778 261 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 AKR7A3O95154 331 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 HRGP04196 525 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 LPLP06858 475 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 ANKRD34CP0C6C1 535 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 NR2C1P13056 603 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 ZNF823P16415 610 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 TBPP20226 339 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 RAB6AP20340 208 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 FKBP2P26885 142 aaKnown RBP7.99□□□□□ -1.13
HDAC3-202ENST00000459727 MST1P26927 711 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 MSX1P28360 303 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 GRPRP30550 384 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 CSF2RBP32927 897 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 SOX2P48431 317 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 VEGFCP49767 419 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 NXPH1P58417 271 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 PSMA6P60900 246 aaKnown RBP7.99□□□□□ -1.13
HDAC3-202ENST00000459727 ADAM8P78325 824 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 TFF2Q03403 129 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 FGL1Q08830 312 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 C17orf67Q0P5P2 114 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 SMAD4Q13485 552 aaKnown RBP7.99□□□□□ -1.13
HDAC3-202ENST00000459727 MEF2DQ14814 521 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 NSDHLQ15738 373 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 MEP1BQ16820 701 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 PCGF3Q3KNV8 242 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 GXYLT1Q4G148 440 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 WDR38Q5JTN6 314 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 TMEM31Q5JXX7 168 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 TMEM244Q5VVB8 128 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 B3GNTL1Q67FW5 361 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-202ENST00000459727 WDR74Q6RFH5 385 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-202ENST00000459727 CBLN3Q6UW01 205 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 TTLL10Q6ZVT0 673 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 UTS2BQ765I0 119 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 PRSS45Q7RTY3 260 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 NAXDQ8IW45 347 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 FTMTQ8N4E7 242 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 ZNF441Q8N8Z8 693 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 TMEM229BQ8NBD8 167 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 MFSD8Q8NHS3 518 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 ZNRF4Q8WWF5 429 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 RNF166Q96A37 237 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-202ENST00000459727 CITED4Q96RK1 184 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 TGIF2Q9GZN2 237 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 TSPAN10Q9H1Z9 355 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-202ENST00000459727 OR10A4Q9H209 315 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 METTL17Q9H7H0 456 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-202ENST00000459727 MOB1AQ9H8S9 216 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 ELOVL3Q9HB03 270 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 SDHAF3Q9NRP4 125 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 MED9Q9NWA0 146 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 NKIRAS2Q9NYR9 191 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 MED11Q9P086 117 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 ZNF69Q9UC07 566 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 HHLA2Q9UM44 414 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 TMED7Q9Y3B3 224 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 R4GMQ9 66 aa7.99□□□□□ -1.13
HDAC3-202ENST00000459727 COL5A1P20908 1838 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-202ENST00000459727 IGLV1-36A0A0B4J1U3 117 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 SLC22A23A1A5C7 686 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 METTL21EPA6NDL7 271 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 ANKUB1A6NFN9 424 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 OR6C65A6NJZ3 312 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 NPIPA5E9PKD4 350 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 H3BMH7 237 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 SMLR1H3BR10 107 aa7.98□□□□□ -1.13
HDAC3-202ENST00000459727 L7N2F9 121 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms