RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 DLG1Q12959 904 aa1.76□□□□□ -2.13
NEDD1-204ENST00000457368 SEC23BQ15437 767 aa1.76□□□□□ -2.13
NEDD1-204ENST00000457368 SMN1Q16637 294 aaKnown RBP1.76□□□□□ -2.13
NEDD1-204ENST00000457368 SPIN4Q56A73 249 aa1.76□□□□□ -2.13
NEDD1-204ENST00000457368 DDX59Q5T1V6 619 aaKnown RBP eCLIP1.76□□□□□ -2.13
NEDD1-204ENST00000457368 OTUD3Q5T2D3 398 aaPredicted RBP1.76□□□□□ -2.13
NEDD1-204ENST00000457368 FAM69AQ5T7M9 428 aa1.76□□□□□ -2.13
NEDD1-204ENST00000457368 CAVIN1Q6NZI2 390 aaKnown RBP1.76□□□□□ -2.13
NEDD1-204ENST00000457368 AAED1Q7RTV5 226 aa1.76□□□□□ -2.13
NEDD1-204ENST00000457368 GRINAQ7Z429 371 aa1.76□□□□□ -2.13
NEDD1-204ENST00000457368 DPPA2Q7Z7J5 298 aa1.76□□□□□ -2.13
NEDD1-204ENST00000457368 ADCK1Q86TW2 530 aa1.76□□□□□ -2.13
NEDD1-204ENST00000457368 MYPOPQ86VE0 399 aaPredicted RBP1.76□□□□□ -2.13
NEDD1-204ENST00000457368 DDIASQ8IXT1 998 aa1.76□□□□□ -2.13
NEDD1-204ENST00000457368 C1orf174Q8IYL3 243 aa1.76□□□□□ -2.13
NEDD1-204ENST00000457368 C1orf52Q8N6N3 182 aaKnown RBP1.76□□□□□ -2.13
NEDD1-204ENST00000457368 ZNF283Q8N7M2 679 aa1.76□□□□□ -2.13
NEDD1-204ENST00000457368 ZBTB8BQ8NAP8 495 aaPredicted RBP1.76□□□□□ -2.13
NEDD1-204ENST00000457368 CPEB3Q8NE35 698 aaKnown RBP1.76□□□□□ -2.13
NEDD1-204ENST00000457368 OR9K2Q8NGE7 335 aa1.76□□□□□ -2.13
NEDD1-204ENST00000457368 PSMA8Q8TAA3 256 aa1.76□□□□□ -2.13
NEDD1-204ENST00000457368 VANGL1Q8TAA9 524 aaPredicted RBP1.76□□□□□ -2.13
NEDD1-204ENST00000457368 SLC9A6Q92581 669 aa1.76□□□□□ -2.13
NEDD1-204ENST00000457368 KTI12Q96EK9 354 aaPredicted RBP1.76□□□□□ -2.13
NEDD1-204ENST00000457368 THOC1Q96FV9 657 aaKnown RBP1.76□□□□□ -2.13
NEDD1-204ENST00000457368 RAB3IPQ96QF0 476 aaPredicted RBP1.76□□□□□ -2.13
NEDD1-204ENST00000457368 ATP6V0BQ99437 205 aa1.76□□□□□ -2.13
NEDD1-204ENST00000457368 CPNE1Q99829 537 aa1.76□□□□□ -2.13
NEDD1-204ENST00000457368 FUT8Q9BYC5 575 aa1.76□□□□□ -2.13
NEDD1-204ENST00000457368 GPR61Q9BZJ8 451 aa1.76□□□□□ -2.13
NEDD1-204ENST00000457368 IQCGQ9H095 443 aaKnown RBP1.76□□□□□ -2.13
NEDD1-204ENST00000457368 TMEM165Q9HC07 324 aa1.76□□□□□ -2.13
NEDD1-204ENST00000457368 MID1IP1Q9NPA3 183 aa1.76□□□□□ -2.13
NEDD1-204ENST00000457368 TRIM36Q9NQ86 728 aa1.76□□□□□ -2.13
NEDD1-204ENST00000457368 TCF7L2Q9NQB0 619 aa1.76□□□□□ -2.13
NEDD1-204ENST00000457368 DECR2Q9NUI1 292 aa1.76□□□□□ -2.13
NEDD1-204ENST00000457368 CHRNA9Q9UGM1 479 aa1.76□□□□□ -2.13
NEDD1-204ENST00000457368 RPUSD1Q9UJJ7 312 aaKnown RBP1.76□□□□□ -2.13
NEDD1-204ENST00000457368 OAZ3Q9UMX2 235 aa1.76□□□□□ -2.13
NEDD1-204ENST00000457368 PACSIN2Q9UNF0 486 aaPredicted RBP1.76□□□□□ -2.13
NEDD1-204ENST00000457368 SNX6Q9UNH7 406 aa1.76□□□□□ -2.13
NEDD1-204ENST00000457368 AURKCQ9UQB9 309 aa1.76□□□□□ -2.13
NEDD1-204ENST00000457368 CAB39Q9Y376 341 aaPredicted RBP1.76□□□□□ -2.13
NEDD1-204ENST00000457368 IGHV2-70DA0A0C4DH43 119 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 RNF103-CHMP3A0A140T963 221 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 AQP7P3A6NL99 342 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 SUPT3HB4E1H0 165 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 C9JVG2 144 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 DNALI1O14645 258 aaPredicted RBP1.75□□□□□ -2.13
NEDD1-204ENST00000457368 ZNF264O43296 627 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 PCDH7O60245 1069 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 E2F6O75461 281 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 SUPT3HO75486 399 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 RSL1D1O76021 490 aaKnown RBP1.75□□□□□ -2.13
NEDD1-204ENST00000457368 SNAP29O95721 258 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 LGI1O95970 557 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 AK1P00568 194 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 IGHV3-13P01766 116 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 RPS17P08708 135 aaKnown RBP1.75□□□□□ -2.13
NEDD1-204ENST00000457368 WNT2P09544 360 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 UBL4AP11441 157 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 HPGDP15428 266 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 TMEM11P17152 192 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 UQCRC2P22695 453 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 GRK5P34947 590 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 TGFBR2P37173 567 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 ALDH3B1P43353 468 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 MAGEB1P43366 347 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 IER3P46695 156 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 NCBP2P52298 156 aaKnown RBP eCLIP1.75□□□□□ -2.13
NEDD1-204ENST00000457368 LGALS4P56470 323 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 POU6F2P78424 691 aaPredicted RBP1.75□□□□□ -2.13
NEDD1-204ENST00000457368 LCN2P80188 198 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 HTD2P86397 168 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 CD69Q07108 199 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 DBPQ10586 325 aaPredicted RBP1.75□□□□□ -2.13
NEDD1-204ENST00000457368 CAMK2DQ13557 499 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 LARS2Q15031 903 aaKnown RBP1.75□□□□□ -2.13
NEDD1-204ENST00000457368 DUSP5Q16690 384 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 TIGD2Q4W5G0 525 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 FBXO48Q5FWF7 155 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 KHDC1LQ5JSQ8 128 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 AVPI1Q5T686 147 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 ZNF774Q6NX45 483 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 CDC73Q6P1J9 531 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 WDR93Q6P2C0 686 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 TTC27Q6P3X3 843 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 C6orf89Q6UWU4 347 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 TMEM107Q6UX40 140 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 Q6ZTK2 550 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 LINGO2Q7L985 606 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 MDP1Q86V88 176 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 NDUFA11Q86Y39 141 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 PTOV1Q86YD1 416 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 HIPK4Q8NE63 616 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 OR4F17Q8NGA8 305 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 OR10S1Q8NGN2 331 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 KIF18AQ8NI77 898 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 ZNF519Q8TB69 540 aa1.75□□□□□ -2.13
NEDD1-204ENST00000457368 SETD6Q8TBK2 473 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms