RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 PLEKHA1Q9HB21 404 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 MIEF1Q9NQG6 463 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 SLC2A8Q9NY64 477 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 TAS2R10Q9NYW0 307 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 METTL1Q9UBP6 276 aaKnown RBP4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 PADI1Q9ULC6 663 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 HDGFL3Q9Y3E1 203 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 TUBAL3A6NHL2 446 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 DBX1A6NMT0 343 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 ZNF197O14709 1029 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 EFSO43281 561 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 PRAMEF2O60811 474 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 PLGP00747 810 aaPredicted RBP4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 TYRP1P17643 537 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 FLT3LGP49771 235 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 CRYBB1P53674 252 aaPredicted RBP4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 MANFP55145 182 aaKnown RBP4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 RPS23P62266 143 aaKnown RBP4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 EEF1A1P68104 462 aaKnown RBP4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 PCK2Q16822 640 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 AMZ1Q400G9 498 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 EEF1A1P5Q5VTE0 462 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 ZNF772Q68DY9 489 aaPredicted RBP4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 ALKBH2Q6NS38 261 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 Q6ZVU0 165 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 FAM122BQ7Z309 247 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 METTL27Q8N6F8 245 aaPredicted RBP4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 TMEM52Q8NDY8 209 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 VPS37AQ8NEZ2 397 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 OR5M8Q8NGP6 311 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 SGPP1Q9BX95 441 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 MFRPQ9BY79 579 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 RHBGQ9H310 441 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 C1orf198Q9H425 327 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 ABT1Q9ULW3 272 aaKnown RBP4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 VSIG4Q9Y279 399 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 A0A1W2PPV9 198 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 H7C1Q1 480 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 XRCC3O43542 346 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 EFCAB14O75071 495 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 ZNF217O75362 1048 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 AQP8O94778 261 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 MBPP02686 304 aaPredicted RBP4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 SFTPCP11686 197 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 RBM34P42696 430 aaKnown RBP4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 INPP1P49441 399 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 NR0B1P51843 470 aaKnown RBP4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 EPHB3P54753 998 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 TAF1CQ15572 869 aaPredicted RBP4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 NKPD1Q17RQ9 610 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 LIPJQ5W064 366 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 GLB1LQ6UWU2 654 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 OR9A2Q8NGT5 310 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 SLC35A4Q96G79 324 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 RTN4RQ9BZR6 473 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 SLC25A32Q9H2D1 315 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 RIMS4Q9H426 269 aaPredicted RBP4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 SRA1Q9HD15 236 aaKnown RBP4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 MARCH5Q9NX47 278 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 CLDND1Q9NY35 253 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 PFDN2Q9UHV9 154 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 PDZD2O15018 2839 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 HIVEP2P31629 2446 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 A0A087WV62 115 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 A0A0B4J2A0 478 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 MCIDASD6RGH6 385 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 EMC8O43402 210 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 LRP3O75074 770 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 LDB3O75112 727 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 ERAL1O75616 437 aaKnown RBP4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 GLSO94925 669 aaPredicted RBP4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 ITGB2P05107 769 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 CSN2P05814 226 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 CD55P08174 381 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 ITGA3P26006 1051 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 SLC16A1P53985 500 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 PRKCZQ05513 592 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 PEA15Q15121 130 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 PCGF3Q3KNV8 242 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 TRMT12Q53H54 448 aaKnown RBP4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 AVPI1Q5T686 147 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 SLC22A10Q63ZE4 541 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 NPSR1Q6W5P4 371 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 SLC36A4Q6YBV0 504 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 NUDT18Q6ZVK8 323 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 GPR142Q7Z601 462 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 DND1Q8IYX4 353 aaKnown RBP4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 NPEPL1Q8NDH3 523 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 RPS4Y2Q8TD47 263 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 TMEM230Q96A57 120 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 PRRC1Q96M27 445 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 WFIKKN1Q96NZ8 548 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 TAAR9Q96RI9 348 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 LMF1Q96S06 567 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 ZNF334Q9HCZ1 680 aaPredicted RBP4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 CHST11Q9NPF2 352 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 SHPKQ9UHJ6 478 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 F8VVB4 439 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 F8VWA3 439 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms