RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 TP53P04637 393 aaPredicted RBP24.42■■□□□ 1.5
SMARCC1-203ENST00000454240 ARHGDIAP52565 204 aa24.42■■□□□ 1.5
SMARCC1-203ENST00000454240 LCN6P62502 163 aa24.42■■□□□ 1.5
SMARCC1-203ENST00000454240 TUBA1BP68363 451 aa24.42■■□□□ 1.5
SMARCC1-203ENST00000454240 TUBA4AP68366 448 aa24.42■■□□□ 1.5
SMARCC1-203ENST00000454240 NRN1LQ496H8 165 aa24.42■■□□□ 1.5
SMARCC1-203ENST00000454240 SHQ1Q6PI26 577 aaKnown RBP24.42■■□□□ 1.5
SMARCC1-203ENST00000454240 TMEM108Q6UXF1 575 aa24.42■■□□□ 1.5
SMARCC1-203ENST00000454240 TUBA1AQ71U36 451 aa24.42■■□□□ 1.5
SMARCC1-203ENST00000454240 SLC22A24Q8N4F4 322 aa24.42■■□□□ 1.5
SMARCC1-203ENST00000454240 FAM169BQ8N8A8 192 aa24.42■■□□□ 1.5
SMARCC1-203ENST00000454240 PLA2G12AQ9BZM1 189 aa24.42■■□□□ 1.5
SMARCC1-203ENST00000454240 B3GNT2Q9NY97 397 aa24.42■■□□□ 1.5
SMARCC1-203ENST00000454240 CRNNQ9UBG3 495 aaPredicted RBP24.42■■□□□ 1.5
SMARCC1-203ENST00000454240 UGT2A1Q9Y4X1 527 aa24.42■■□□□ 1.5
SMARCC1-203ENST00000454240 IDH3BO43837 385 aa24.41■■□□□ 1.5
SMARCC1-203ENST00000454240 PLAUP00749 431 aa24.41■■□□□ 1.5
SMARCC1-203ENST00000454240 CD3EP07766 207 aa24.41■■□□□ 1.5
SMARCC1-203ENST00000454240 FCGR1AP12314 374 aa24.41■■□□□ 1.5
SMARCC1-203ENST00000454240 PRKACGP22612 351 aa24.41■■□□□ 1.5
SMARCC1-203ENST00000454240 PTAFRP25105 342 aa24.41■■□□□ 1.5
SMARCC1-203ENST00000454240 PTCHD4Q6ZW05 846 aa24.41■■□□□ 1.5
SMARCC1-203ENST00000454240 ADCK1Q86TW2 530 aa24.41■■□□□ 1.5
SMARCC1-203ENST00000454240 OR52L1Q8NGH7 329 aa24.41■■□□□ 1.5
SMARCC1-203ENST00000454240 OR8D4Q8NGM9 314 aa24.41■■□□□ 1.5
SMARCC1-203ENST00000454240 BDH2Q9BUT1 245 aa24.41■■□□□ 1.5
SMARCC1-203ENST00000454240 DENND2DQ9H6A0 471 aaPredicted RBP24.41■■□□□ 1.5
SMARCC1-203ENST00000454240 MOV10Q9HCE1 1003 aaKnown RBP24.41■■□□□ 1.5
SMARCC1-203ENST00000454240 ZNF224Q9NZL3 707 aa24.41■■□□□ 1.5
SMARCC1-203ENST00000454240 VSX1Q9NZR4 365 aaPredicted RBP24.41■■□□□ 1.5
SMARCC1-203ENST00000454240 M0R1B8 84 aa24.4■■□□□ 1.5
SMARCC1-203ENST00000454240 BHLHE40O14503 412 aa24.4■■□□□ 1.5
SMARCC1-203ENST00000454240 IGFBP1P08833 259 aaPredicted RBP24.4■■□□□ 1.5
SMARCC1-203ENST00000454240 OR8G3PP0DMU2 310 aa24.4■■□□□ 1.5
SMARCC1-203ENST00000454240 ANXA8P13928 327 aa24.4■■□□□ 1.5
SMARCC1-203ENST00000454240 CBR1P16152 277 aa24.4■■□□□ 1.5
SMARCC1-203ENST00000454240 CD40P25942 277 aa24.4■■□□□ 1.5
SMARCC1-203ENST00000454240 CDKN2AP42771 156 aaKnown RBP24.4■■□□□ 1.5
SMARCC1-203ENST00000454240 C3orf36Q3SXR2 165 aa24.4■■□□□ 1.5
SMARCC1-203ENST00000454240 CLEC12AQ5QGZ9 265 aa24.4■■□□□ 1.5
SMARCC1-203ENST00000454240 ZNF704Q6ZNC4 412 aaPredicted RBP24.4■■□□□ 1.5
SMARCC1-203ENST00000454240 SKA3Q8IX90 412 aa24.4■■□□□ 1.5
SMARCC1-203ENST00000454240 OR5K1Q8NHB7 308 aa24.4■■□□□ 1.5
SMARCC1-203ENST00000454240 PYDC1Q8WXC3 89 aa24.4■■□□□ 1.5
SMARCC1-203ENST00000454240 LRTOMTQ8WZ04 291 aa24.4■■□□□ 1.5
SMARCC1-203ENST00000454240 NSMAFQ92636 917 aa24.4■■□□□ 1.5
SMARCC1-203ENST00000454240 REV1Q9UBZ9 1251 aa24.4■■□□□ 1.5
SMARCC1-203ENST00000454240 RNF115Q9Y4L5 304 aa24.4■■□□□ 1.5
SMARCC1-203ENST00000454240 PDZD2O15018 2839 aa24.4■■□□□ 1.5
SMARCC1-203ENST00000454240 MGRN1O60291 552 aa24.39■■□□□ 1.49
SMARCC1-203ENST00000454240 ENTPD5O75356 428 aa24.39■■□□□ 1.49
SMARCC1-203ENST00000454240 IGKV3-15P01624 115 aa24.39■■□□□ 1.49
SMARCC1-203ENST00000454240 IGLV1-44P01699 117 aa24.39■■□□□ 1.49
SMARCC1-203ENST00000454240 HLA-HP01893 362 aa24.39■■□□□ 1.49
SMARCC1-203ENST00000454240 MRPS34P82930 218 aaKnown RBP24.39■■□□□ 1.49
SMARCC1-203ENST00000454240 AMIGO2Q86SJ2 522 aa24.39■■□□□ 1.49
SMARCC1-203ENST00000454240 NRGNQ92686 78 aa24.39■■□□□ 1.49
SMARCC1-203ENST00000454240 SOX14O95416 240 aa24.38■■□□□ 1.49
SMARCC1-203ENST00000454240 HIST1H1CP16403 213 aaKnown RBP24.38■■□□□ 1.49
SMARCC1-203ENST00000454240 NPR2P20594 1047 aa24.38■■□□□ 1.49
SMARCC1-203ENST00000454240 CDAP32320 146 aa24.38■■□□□ 1.49
SMARCC1-203ENST00000454240 CAPZA2P47755 286 aa24.38■■□□□ 1.49
SMARCC1-203ENST00000454240 FOXL2NBQ6ZUU3 175 aa24.38■■□□□ 1.49
SMARCC1-203ENST00000454240 MDP1Q86V88 176 aa24.38■■□□□ 1.49
SMARCC1-203ENST00000454240 NANOS1Q8WY41 292 aaKnown RBP24.38■■□□□ 1.49
SMARCC1-203ENST00000454240 HTRA1Q92743 480 aa24.38■■□□□ 1.49
SMARCC1-203ENST00000454240 NABP1Q96AH0 204 aa24.38■■□□□ 1.49
SMARCC1-203ENST00000454240 SLC38A2Q96QD8 506 aa24.38■■□□□ 1.49
SMARCC1-203ENST00000454240 SNX18Q96RF0 628 aa24.38■■□□□ 1.49
SMARCC1-203ENST00000454240 SH3GL3Q99963 347 aa24.38■■□□□ 1.49
SMARCC1-203ENST00000454240 TSSK6Q9BXA6 273 aa24.38■■□□□ 1.49
SMARCC1-203ENST00000454240 LIME1Q9H400 295 aa24.38■■□□□ 1.49
SMARCC1-203ENST00000454240 SIAEQ9HAT2 523 aa24.38■■□□□ 1.49
SMARCC1-203ENST00000454240 TBC1D23Q9NUY8 699 aa24.38■■□□□ 1.49
SMARCC1-203ENST00000454240 IGHV1-18A0A0C4DH31 117 aa24.37■■□□□ 1.49
SMARCC1-203ENST00000454240 ABCD4O14678 606 aa24.37■■□□□ 1.49
SMARCC1-203ENST00000454240 FARS2O95363 451 aaKnown RBP24.37■■□□□ 1.49
SMARCC1-203ENST00000454240 NOS3P29474 1203 aa24.37■■□□□ 1.49
SMARCC1-203ENST00000454240 ARR3P36575 388 aa24.37■■□□□ 1.49
SMARCC1-203ENST00000454240 ETFDHQ16134 617 aa24.37■■□□□ 1.49
SMARCC1-203ENST00000454240 ZSCAN26Q16670 478 aa24.37■■□□□ 1.49
SMARCC1-203ENST00000454240 ADAM5Q6NVV9 412 aa24.37■■□□□ 1.49
SMARCC1-203ENST00000454240 ZFP1Q6P2D0 407 aa24.37■■□□□ 1.49
SMARCC1-203ENST00000454240 HIPK1Q86Z02 1210 aa24.37■■□□□ 1.49
SMARCC1-203ENST00000454240 C10orf67Q8IYJ2 551 aa24.37■■□□□ 1.49
SMARCC1-203ENST00000454240 LNX2Q8N448 690 aa24.37■■□□□ 1.49
SMARCC1-203ENST00000454240 LILRB1Q8NHL6 650 aaPredicted RBP24.37■■□□□ 1.49
SMARCC1-203ENST00000454240 FGFBP3Q8TAT2 258 aa24.37■■□□□ 1.49
SMARCC1-203ENST00000454240 ZNF75AQ96N20 296 aa24.37■■□□□ 1.49
SMARCC1-203ENST00000454240 SYT4Q9H2B2 425 aa24.37■■□□□ 1.49
SMARCC1-203ENST00000454240 ZNF556Q9HAH1 456 aa24.37■■□□□ 1.49
SMARCC1-203ENST00000454240 H3BNX3 289 aa24.36■■□□□ 1.49
SMARCC1-203ENST00000454240 UBL3O95164 117 aa24.36■■□□□ 1.49
SMARCC1-203ENST00000454240 CD79AP11912 226 aa24.36■■□□□ 1.49
SMARCC1-203ENST00000454240 CTLA4P16410 223 aa24.36■■□□□ 1.49
SMARCC1-203ENST00000454240 PIGFQ07326 219 aa24.36■■□□□ 1.49
SMARCC1-203ENST00000454240 GSG1Q2KHT4 349 aa24.36■■□□□ 1.49
SMARCC1-203ENST00000454240 ATG16L2Q8NAA4 619 aa24.36■■□□□ 1.49
SMARCC1-203ENST00000454240 OR4K13Q8NH42 304 aa24.36■■□□□ 1.49
SMARCC1-203ENST00000454240 RADILQ96JH8 1075 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms