RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 OR11H7Q8NGC8 314 aa14.29□□□□□ -0.12
SNX17-204ENST00000453453 TMED9Q9BVK6 235 aa14.29□□□□□ -0.12
SNX17-204ENST00000453453 MFRPQ9BY79 579 aa14.29□□□□□ -0.12
SNX17-204ENST00000453453 KCNMB2Q9Y691 235 aa14.29□□□□□ -0.12
SNX17-204ENST00000453453 A0A087WUJ7 227 aa14.28□□□□□ -0.12
SNX17-204ENST00000453453 A0A087WZY1 265 aa14.28□□□□□ -0.12
SNX17-204ENST00000453453 I3L521 148 aa14.28□□□□□ -0.12
SNX17-204ENST00000453453 J3QRE1 110 aa14.28□□□□□ -0.12
SNX17-204ENST00000453453 SURF4O15260 269 aa14.28□□□□□ -0.12
SNX17-204ENST00000453453 PRAF2O60831 178 aa14.28□□□□□ -0.12
SNX17-204ENST00000453453 LALBAP00709 142 aa14.28□□□□□ -0.12
SNX17-204ENST00000453453 F10P00742 488 aa14.28□□□□□ -0.12
SNX17-204ENST00000453453 IFI30P13284 250 aa14.28□□□□□ -0.12
SNX17-204ENST00000453453 NAT1P18440 290 aa14.28□□□□□ -0.12
SNX17-204ENST00000453453 CELP19835 753 aa14.28□□□□□ -0.12
SNX17-204ENST00000453453 TACR3P29371 465 aa14.28□□□□□ -0.12
SNX17-204ENST00000453453 ARG2P78540 354 aa14.28□□□□□ -0.12
SNX17-204ENST00000453453 PGGHGQ32M88 737 aa14.28□□□□□ -0.12
SNX17-204ENST00000453453 VASNQ6EMK4 673 aa14.28□□□□□ -0.12
SNX17-204ENST00000453453 FAM122CQ6P4D5 195 aa14.28□□□□□ -0.12
SNX17-204ENST00000453453 SMARCD3Q6STE5 483 aa14.28□□□□□ -0.12
SNX17-204ENST00000453453 BTN2A1Q7KYR7 527 aa14.28□□□□□ -0.12
SNX17-204ENST00000453453 ATG4DQ86TL0 474 aaPredicted RBP14.28□□□□□ -0.12
SNX17-204ENST00000453453 FADS6Q8N9I5 356 aa14.28□□□□□ -0.12
SNX17-204ENST00000453453 OR8D4Q8NGM9 314 aa14.28□□□□□ -0.12
SNX17-204ENST00000453453 JSRP1Q96MG2 331 aaPredicted RBP14.28□□□□□ -0.12
SNX17-204ENST00000453453 C5orf34Q96MH7 638 aa14.28□□□□□ -0.12
SNX17-204ENST00000453453 CMTM3Q96MX0 182 aa14.28□□□□□ -0.12
SNX17-204ENST00000453453 DCBLD2Q96PD2 775 aa14.28□□□□□ -0.12
SNX17-204ENST00000453453 PLA2G12AQ9BZM1 189 aa14.28□□□□□ -0.12
SNX17-204ENST00000453453 SLC19A3Q9BZV2 496 aa14.28□□□□□ -0.12
SNX17-204ENST00000453453 ADAM19Q9H013 955 aa14.28□□□□□ -0.12
SNX17-204ENST00000453453 FN3KQ9H479 309 aa14.28□□□□□ -0.12
SNX17-204ENST00000453453 ZNF552Q9H707 407 aaPredicted RBP14.28□□□□□ -0.12
SNX17-204ENST00000453453 PLA2G3Q9NZ20 509 aa14.28□□□□□ -0.12
SNX17-204ENST00000453453 AKAP13Q12802 2813 aa14.27□□□□□ -0.12
SNX17-204ENST00000453453 TEX13CA0A0J9YWL9 993 aa14.27□□□□□ -0.12
SNX17-204ENST00000453453 SHISA3A0PJX4 238 aa14.27□□□□□ -0.12
SNX17-204ENST00000453453 G3V3Y1 287 aa14.27□□□□□ -0.12
SNX17-204ENST00000453453 CTDSPLO15194 276 aa14.27□□□□□ -0.12
SNX17-204ENST00000453453 GSTZ1O43708 216 aaPredicted RBP14.27□□□□□ -0.12
SNX17-204ENST00000453453 TMEM127O75204 238 aa14.27□□□□□ -0.12
SNX17-204ENST00000453453 TCRBP04435 133 aa14.27□□□□□ -0.12
SNX17-204ENST00000453453 CD46P15529 392 aa14.27□□□□□ -0.12
SNX17-204ENST00000453453 CNR1P21554 472 aa14.27□□□□□ -0.12
SNX17-204ENST00000453453 THBS2P35442 1172 aa14.27□□□□□ -0.12
SNX17-204ENST00000453453 MMP15P51511 669 aa14.27□□□□□ -0.12
SNX17-204ENST00000453453 DHODHQ02127 395 aa14.27□□□□□ -0.12
SNX17-204ENST00000453453 DYRK1AQ13627 763 aa14.27□□□□□ -0.12
SNX17-204ENST00000453453 TOMM34Q15785 309 aaPredicted RBP14.27□□□□□ -0.12
SNX17-204ENST00000453453 SPINK14Q6IE38 97 aa14.27□□□□□ -0.12
SNX17-204ENST00000453453 LINC00114Q6XXX2 140 aa14.27□□□□□ -0.12
SNX17-204ENST00000453453 WDR88Q6ZMY6 472 aa14.27□□□□□ -0.12
SNX17-204ENST00000453453 GPAT4Q86UL3 456 aa14.27□□□□□ -0.12
SNX17-204ENST00000453453 WDSUB1Q8N9V3 476 aa14.27□□□□□ -0.12
SNX17-204ENST00000453453 SPRYD4Q8WW59 207 aaPredicted RBP14.27□□□□□ -0.12
SNX17-204ENST00000453453 FAM46AQ96IP4 442 aaKnown RBP14.27□□□□□ -0.12
SNX17-204ENST00000453453 GPA33Q99795 319 aa14.27□□□□□ -0.12
SNX17-204ENST00000453453 FAM173AQ9BQD7 235 aa14.27□□□□□ -0.12
SNX17-204ENST00000453453 ZNF426Q9BUY5 554 aa14.27□□□□□ -0.12
SNX17-204ENST00000453453 PPA2Q9H2U2 334 aa14.27□□□□□ -0.12
SNX17-204ENST00000453453 RERGLQ9H628 205 aa14.27□□□□□ -0.12
SNX17-204ENST00000453453 IL20Q9NYY1 176 aa14.27□□□□□ -0.12
SNX17-204ENST00000453453 ZNF222Q9UK12 451 aa14.27□□□□□ -0.12
SNX17-204ENST00000453453 BOKQ9UMX3 212 aaPredicted RBP14.27□□□□□ -0.12
SNX17-204ENST00000453453 VDAC3Q9Y277 283 aa14.27□□□□□ -0.12
SNX17-204ENST00000453453 SSUH2Q9Y2M2 353 aa14.27□□□□□ -0.12
SNX17-204ENST00000453453 KLF13Q9Y2Y9 288 aaPredicted RBP14.27□□□□□ -0.12
SNX17-204ENST00000453453 MAB21L2Q9Y586 359 aa14.27□□□□□ -0.12
SNX17-204ENST00000453453 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 SMIM30A4D0T7 59 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 PIP5K1CO60331 668 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 TSC22D2O75157 780 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 CBR3O75828 277 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 NEURL1O76050 574 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 UBL3O95164 117 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 PAHP00439 452 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 APOBEC1P41238 236 aaKnown RBP14.26□□□□□ -0.13
SNX17-204ENST00000453453 OMPP47874 163 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 DNASE1L1P49184 302 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 UCNP55089 124 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 KCTD20Q7Z5Y7 419 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 LHFPL3Q86UP9 236 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 ZNF227Q86WZ6 799 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 UXS1Q8NBZ7 420 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 FDCSPQ8NFU4 85 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 HAS2Q92819 552 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 NTNG2Q96CW9 530 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 MRGPRX4Q96LA9 322 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 SIGLEC12Q96PQ1 595 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 EGLN3Q9H6Z9 239 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 PROK2Q9HC23 129 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 DKKL1Q9UK85 242 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 PCNX3Q9H6A9 2034 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 TMED7-TICAM2A0A0A6YYA0 188 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 KLF4O43474 513 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 CEACAM4O75871 244 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 NCR1O76036 304 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 PTNP21246 168 aa14.26□□□□□ -0.13
SNX17-204ENST00000453453 DNASE1P24855 282 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms