RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 CLVS1Q8IUQ0 354 aaPredicted RBP5.33□□□□□ -1.56
SDC4P-201ENST00000453285 SLC35F2Q8IXU6 374 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 TMEM123Q8N131 208 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 RFLNBQ8N5W9 214 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 MEIOBQ8N635 442 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 SYT14Q8NB59 555 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 NOXO1Q8NFA2 376 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 OR6K6Q8NGW6 343 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 OR2T27Q8NH04 317 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 OR52N1Q8NH53 320 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 ZNF420Q8TAQ5 688 aaPredicted RBP5.33□□□□□ -1.56
SDC4P-201ENST00000453285 SPRYD4Q8WW59 207 aaPredicted RBP5.33□□□□□ -1.56
SDC4P-201ENST00000453285 GATAD2BQ8WXI9 593 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 EXTL1Q92935 676 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 TMEM54Q969K7 222 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 CPNE4Q96A23 557 aaPredicted RBP5.33□□□□□ -1.56
SDC4P-201ENST00000453285 ZHX1-C8orf76Q96EF9 292 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 ABHD17AQ96GS6 310 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 SLC25A44Q96H78 314 aaPredicted RBP5.33□□□□□ -1.56
SDC4P-201ENST00000453285 ADAD1Q96M93 576 aaKnown RBP5.33□□□□□ -1.56
SDC4P-201ENST00000453285 OR2M2Q96R28 347 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 CNN2Q99439 309 aaKnown RBP5.33□□□□□ -1.56
SDC4P-201ENST00000453285 TBX5Q99593 518 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 ALG8Q9BVK2 526 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 FUNDC2Q9BWH2 189 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 MND1Q9BWT6 205 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 LDAHQ9H6V9 325 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 WDR76Q9H967 626 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 ISG20L2Q9H9L3 353 aaKnown RBP5.33□□□□□ -1.56
SDC4P-201ENST00000453285 ISYNA1Q9NPH2 558 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 TIGARQ9NQ88 270 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 INPP5EQ9NRR6 644 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 ENPP5Q9UJA9 477 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 ZMIZ1Q9ULJ6 1067 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 LHX6Q9UPM6 363 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 COA3Q9Y2R0 106 aaPredicted RBP5.33□□□□□ -1.56
SDC4P-201ENST00000453285 KLHDC2Q9Y2U9 406 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 CAB39Q9Y376 341 aaPredicted RBP5.33□□□□□ -1.56
SDC4P-201ENST00000453285 SF3B6Q9Y3B4 125 aaKnown RBP5.33□□□□□ -1.56
SDC4P-201ENST00000453285 FLVCR1Q9Y5Y0 555 aa5.33□□□□□ -1.56
SDC4P-201ENST00000453285 LAMA5O15230 3695 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 TPRP12270 2363 aaKnown RBP5.32□□□□□ -1.56
SDC4P-201ENST00000453285 DAPL1A0PJW8 107 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 ZNF726A6NNF4 738 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 E9PI62 339 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 NPIPA2E9PIF3 369 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 NPIPA3F8WFD2 350 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 ZNF701M0R085 212 aaPredicted RBP5.32□□□□□ -1.56
SDC4P-201ENST00000453285 AQP7O14520 342 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 TFECO14948 347 aaPredicted RBP5.32□□□□□ -1.56
SDC4P-201ENST00000453285 MYL12BO14950 172 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 MAGEB4O15481 346 aaPredicted RBP5.32□□□□□ -1.56
SDC4P-201ENST00000453285 ZNHIT1O43257 154 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 AQP8O94778 261 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 GABARAPO95166 117 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 MPZL1O95297 269 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 IGHG1P01857 330 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 CD36P16671 472 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 CPEP16870 476 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 ZNF24P17028 368 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 ALOX5APP20292 161 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 RGS6P49758 472 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 SELENOPP49908 381 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 BLVRAP53004 296 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 TMBIM6P55061 237 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 UCNP55089 124 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 OR12D2P58182 307 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 CLRN1P58418 232 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 RPS3AP61247 264 aaKnown RBP5.32□□□□□ -1.56
SDC4P-201ENST00000453285 ACTC1P68032 377 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 ACTA1P68133 377 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 HSF2Q03933 536 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 RASGEF1BQ0VAM2 473 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 MLLT11Q13015 90 aaPredicted RBP5.32□□□□□ -1.56
SDC4P-201ENST00000453285 AQP6Q13520 282 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 TPBGQ13641 420 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 CTF1Q16619 201 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 TSTQ16762 297 aaKnown RBP5.32□□□□□ -1.56
SDC4P-201ENST00000453285 PCK2Q16822 640 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 CDONQ4KMG0 1287 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 TEX30Q5JUR7 227 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 OTPQ5XKR4 325 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 CARD17Q5XLA6 110 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 LRRC69Q6ZNQ3 347 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 FOXL2NBQ6ZUU3 175 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 HDDC2Q7Z4H3 204 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 FGD2Q7Z6J4 655 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 ADGRE4PQ86SQ3 457 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 ERI1Q8IV48 349 aaKnown RBP5.32□□□□□ -1.56
SDC4P-201ENST00000453285 PHC2Q8IXK0 858 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 C20orf196Q8IYI0 205 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 KLHL36Q8N4N3 616 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 SLC26A10Q8NG04 563 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 OR10H4Q8NGA5 316 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 FNDC8Q8TC99 324 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 RNF128Q8TEB7 428 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 ABHD3Q8WU67 409 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 MCHR2Q969V1 340 aa5.32□□□□□ -1.56
SDC4P-201ENST00000453285 RNF166Q96A37 237 aaPredicted RBP5.32□□□□□ -1.56
SDC4P-201ENST00000453285 TMEM45BQ96B21 275 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms