RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 SLC6A19Q695T7 634 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 C5orf46Q6UWT4 87 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 IL20RBQ6UXL0 311 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 LRRC28Q86X40 367 aaPredicted RBP9.63□□□□□ -0.87
PKP4-206ENST00000452162 ST8SIA1Q92185 356 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 SLC25A36Q96CQ1 311 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 OR14A2Q96R54 314 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 SNX18Q96RF0 628 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 OR11A1Q9GZK7 315 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 SYT4Q9H2B2 425 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 MRM2Q9UI43 246 aaKnown RBP9.63□□□□□ -0.87
PKP4-206ENST00000452162 LOC102723996A0A087X1L8 192 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 IGHV1-45A0A0A0MS14 117 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 TVP23AA6NH52 213 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 FAM25AB3EWG3 89 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 FAM25CB3EWG5 89 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 FAM25GB3EWG6 89 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 FTCDNL1E5RQL4 147 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 C11orf98E9PRG8 122 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 PSMD9O00233 223 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 ARHGEF9O43307 516 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 UPK3AO75631 287 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 ARL6IP5O75915 188 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 AKR7A3O95154 331 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 EIF4EP06730 217 aaKnown RBP9.62□□□□□ -0.87
PKP4-206ENST00000452162 CYC1P08574 325 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 PRKCAP17252 672 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 CCL11P51671 97 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 RPL27P61353 136 aaKnown RBP9.62□□□□□ -0.87
PKP4-206ENST00000452162 C17orf67Q0P5P2 114 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 PCOLCEQ15113 449 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 CARTPTQ16568 116 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 LYPD8Q6UX82 237 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 KCTD20Q7Z5Y7 419 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 PM20D2Q8IYS1 436 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 OR6S1Q8NH40 331 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 TMEM234Q8WY98 164 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 RGP1Q92546 391 aaPredicted RBP9.62□□□□□ -0.87
PKP4-206ENST00000452162 NPAS1Q99742 590 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 ZNF160Q9HCG1 818 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 EXTL2Q9UBQ6 330 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 HRH3Q9Y5N1 445 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 COL6A6A6NMZ7 2263 aa9.62□□□□□ -0.87
PKP4-206ENST00000452162 C2orf72A6NCS6 295 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 A6NL46 340 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 NOTOA8MTQ0 251 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 ERVH48-1M5A8F1 160 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 PLPP3O14495 311 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 AHSA1O95433 338 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 OR8G3PP0DMU2 310 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 NPR2P20594 1047 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 EIF2B2P49770 351 aaKnown RBP9.61□□□□□ -0.87
PKP4-206ENST00000452162 TPTEP56180 551 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 OR2B6P58173 313 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 Q0VFX4 171 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 LY6DQ14210 128 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 ACKR1Q16570 336 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 AGAP6Q5VW22 663 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 OR5M10Q6IEU7 315 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 NDUFAF7Q7L592 441 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 AKAP14Q86UN6 197 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 UBQLNLQ8IYU4 475 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 OR4M1Q8NGD0 313 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 OR5L2Q8NGL0 311 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 TRMT10AQ8TBZ6 339 aaKnown RBP9.61□□□□□ -0.87
PKP4-206ENST00000452162 PHYHIPQ92561 330 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 MAP6Q96JE9 813 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 FER1L6-AS2Q96M78 137 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 AGAP4Q96P64 663 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 MNTQ99583 582 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.61□□□□□ -0.871e-7■■■□□ 14.7
PKP4-206ENST00000452162 TXNIPQ9H3M7 391 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 GALNT9Q9HCQ5 603 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 MRPL39Q9NYK5 338 aaKnown RBP9.61□□□□□ -0.87
PKP4-206ENST00000452162 NPAP1Q9NZP6 1156 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 ZNF281Q9Y2X9 895 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 A0A0G2JMP0 313 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 A0A0X1KG70 313 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 A0A1W2PPK0 400 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 A0A1W2PQ72 361 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 PRSS37A4D1T9 235 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 PIN1P1O15428 100 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 PAHP00439 452 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 CELA2AP08217 269 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 PSKH1P11801 424 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 ZNF24P17028 368 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 ATF1P18846 271 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 RRADP55042 308 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 TRIQKQ629K1 86 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 SYT9Q86SS6 491 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 RDH10Q8IZV5 341 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 SAMD12Q8N8I0 201 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 OR4M2Q8NGB6 313 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 ZNF417Q8TAU3 575 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 HSD17B8Q92506 261 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 ADAD1Q96M93 576 aaKnown RBP9.61□□□□□ -0.87
PKP4-206ENST00000452162 KLHL15Q96M94 604 aa9.61□□□□□ -0.87
PKP4-206ENST00000452162 BBC3Q96PG8 261 aaPredicted RBP9.61□□□□□ -0.87
PKP4-206ENST00000452162 ZNF587Q96SQ5 575 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms