RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 JAZF1Q86VZ6 243 aa11.47□□□□□ -0.57
VPS33A-202ENST00000451053 GPR137CQ8N3F9 429 aa11.47□□□□□ -0.57
VPS33A-202ENST00000451053 TCEANCQ8N8B7 351 aa11.47□□□□□ -0.57
VPS33A-202ENST00000451053 SYT14Q8NB59 555 aa11.47□□□□□ -0.57
VPS33A-202ENST00000451053 RHOXF1Q8NHV9 184 aa11.47□□□□□ -0.57
VPS33A-202ENST00000451053 TMEM163Q8TC26 289 aa11.47□□□□□ -0.57
VPS33A-202ENST00000451053 ZNF837Q96EG3 531 aaPredicted RBP11.47□□□□□ -0.57
VPS33A-202ENST00000451053 LRRC46Q96FV0 321 aa11.47□□□□□ -0.57
VPS33A-202ENST00000451053 LRR1Q96L50 414 aa11.47□□□□□ -0.57
VPS33A-202ENST00000451053 SNX18Q96RF0 628 aa11.47□□□□□ -0.57
VPS33A-202ENST00000451053 KCNK17Q96T54 332 aa11.47□□□□□ -0.57
VPS33A-202ENST00000451053 YTHDF1Q9BYJ9 559 aaKnown RBP11.47□□□□□ -0.57
VPS33A-202ENST00000451053 CRLF2Q9HC73 371 aa11.47□□□□□ -0.57
VPS33A-202ENST00000451053 GPR35Q9HC97 309 aa11.47□□□□□ -0.57
VPS33A-202ENST00000451053 RASSF1Q9NS23 344 aa11.47□□□□□ -0.57
VPS33A-202ENST00000451053 ZNF226Q9NYT6 803 aa11.47□□□□□ -0.57
VPS33A-202ENST00000451053 GLTPQ9NZD2 209 aa11.47□□□□□ -0.57
VPS33A-202ENST00000451053 MYO18BQ8IUG5 2567 aa11.46□□□□□ -0.57
VPS33A-202ENST00000451053 CACNA1CQ13936 2221 aa11.46□□□□□ -0.57
VPS33A-202ENST00000451053 SH3D21A4FU49 640 aa11.46□□□□□ -0.57
VPS33A-202ENST00000451053 RPL36A-HNRNPH2H7BZ11 118 aa11.46□□□□□ -0.57
VPS33A-202ENST00000451053 XKRYO14609 159 aa11.46□□□□□ -0.57
VPS33A-202ENST00000451053 ARHGEF9O43307 516 aa11.46□□□□□ -0.57
VPS33A-202ENST00000451053 TLX2O43763 284 aaPredicted RBP11.46□□□□□ -0.57
VPS33A-202ENST00000451053 TNFAIP8O95379 198 aa11.46□□□□□ -0.57
VPS33A-202ENST00000451053 UGT2B10P36537 528 aa11.46□□□□□ -0.57
VPS33A-202ENST00000451053 CHN2P52757 468 aa11.46□□□□□ -0.57
VPS33A-202ENST00000451053 CXCR4P61073 352 aa11.46□□□□□ -0.57
VPS33A-202ENST00000451053 FMODQ06828 376 aa11.46□□□□□ -0.57
VPS33A-202ENST00000451053 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.46□□□□□ -0.57
VPS33A-202ENST00000451053 CDK5R2Q13319 367 aa11.46□□□□□ -0.57
VPS33A-202ENST00000451053 ITGADQ13349 1161 aa11.46□□□□□ -0.57
VPS33A-202ENST00000451053 P2RY6Q15077 328 aa11.46□□□□□ -0.57
VPS33A-202ENST00000451053 OCLNQ16625 522 aa11.46□□□□□ -0.57
VPS33A-202ENST00000451053 HIST3H3Q16695 136 aa11.46□□□□□ -0.57
VPS33A-202ENST00000451053 RBM48Q5RL73 367 aaKnown RBP11.46□□□□□ -0.57
VPS33A-202ENST00000451053 SLC35F1Q5T1Q4 408 aa11.46□□□□□ -0.57
VPS33A-202ENST00000451053 SFRP5Q5T4F7 317 aa11.46□□□□□ -0.57
VPS33A-202ENST00000451053 LRFN4Q6PJG9 635 aa11.46□□□□□ -0.57
VPS33A-202ENST00000451053 GID4Q8IVV7 300 aa11.46□□□□□ -0.57
VPS33A-202ENST00000451053 ZNF786Q8N393 782 aa11.46□□□□□ -0.57
VPS33A-202ENST00000451053 ZNF433Q8N7K0 673 aaPredicted RBP11.46□□□□□ -0.57
VPS33A-202ENST00000451053 RFKQ969G6 155 aa11.46□□□□□ -0.57
VPS33A-202ENST00000451053 NMD3Q96D46 503 aaKnown RBP11.46□□□□□ -0.57
VPS33A-202ENST00000451053 PSMG3-AS1Q96PY0 264 aa11.46□□□□□ -0.57
VPS33A-202ENST00000451053 IL4I1Q96RQ9 567 aa11.46□□□□□ -0.57
VPS33A-202ENST00000451053 ULBP2Q9BZM5 246 aa11.46□□□□□ -0.57
VPS33A-202ENST00000451053 B3GAT2Q9NPZ5 323 aa11.46□□□□□ -0.57
VPS33A-202ENST00000451053 SCN3BQ9NY72 215 aa11.46□□□□□ -0.57
VPS33A-202ENST00000451053 UBAP1Q9NZ09 502 aa11.46□□□□□ -0.57
VPS33A-202ENST00000451053 USP9XQ93008 2570 aaPredicted RBP11.45□□□□□ -0.58
VPS33A-202ENST00000451053 IGKV1D-43A0A0B4J1Z2 117 aa11.45□□□□□ -0.58
VPS33A-202ENST00000451053 CENPBD1B2RD01 187 aa11.45□□□□□ -0.58
VPS33A-202ENST00000451053 PRR23D1E9PI22 279 aaPredicted RBP11.45□□□□□ -0.58
VPS33A-202ENST00000451053 C16orf97H3BN30 126 aa11.45□□□□□ -0.58
VPS33A-202ENST00000451053 AHCYL1O43865 530 aa11.45□□□□□ -0.58
VPS33A-202ENST00000451053 PRKYO43930 277 aa11.45□□□□□ -0.58
VPS33A-202ENST00000451053 RAD51DO75771 328 aa11.45□□□□□ -0.58
VPS33A-202ENST00000451053 SLC2A10O95528 541 aa11.45□□□□□ -0.58
VPS33A-202ENST00000451053 RENP00797 406 aa11.45□□□□□ -0.58
VPS33A-202ENST00000451053 QDPRP09417 244 aa11.45□□□□□ -0.58
VPS33A-202ENST00000451053 CCDC159P0C7I6 412 aa11.45□□□□□ -0.58
VPS33A-202ENST00000451053 PRR23D2P0DMB1 279 aaPredicted RBP11.45□□□□□ -0.58
VPS33A-202ENST00000451053 NR2C1P13056 603 aa11.45□□□□□ -0.58
VPS33A-202ENST00000451053 HIST1H1CP16403 213 aaKnown RBP11.45□□□□□ -0.58
VPS33A-202ENST00000451053 IGFBP2P18065 325 aa11.45□□□□□ -0.58
VPS33A-202ENST00000451053 GABRB1P18505 474 aa11.45□□□□□ -0.58
VPS33A-202ENST00000451053 PSMB1P20618 241 aaKnown RBP11.45□□□□□ -0.58
VPS33A-202ENST00000451053 MPGP29372 298 aa11.45□□□□□ -0.58
VPS33A-202ENST00000451053 CDKN2AP42771 156 aaKnown RBP11.45□□□□□ -0.58
VPS33A-202ENST00000451053 ARF1P84077 181 aaKnown RBP11.45□□□□□ -0.58
VPS33A-202ENST00000451053 EFNB1P98172 346 aa11.45□□□□□ -0.58
VPS33A-202ENST00000451053 CEACAM16Q2WEN9 425 aa11.45□□□□□ -0.58
VPS33A-202ENST00000451053 C6orf141Q5SZD1 244 aa11.45□□□□□ -0.58
VPS33A-202ENST00000451053 UGT2A3Q6UWM9 527 aa11.45□□□□□ -0.58
VPS33A-202ENST00000451053 BHLHA15Q7RTS1 189 aaPredicted RBP11.45□□□□□ -0.58
VPS33A-202ENST00000451053 ABHD12BQ7Z5M8 362 aaPredicted RBP11.45□□□□□ -0.58
VPS33A-202ENST00000451053 OR52E2Q8NGJ4 325 aa11.45□□□□□ -0.58
VPS33A-202ENST00000451053 OR4K13Q8NH42 304 aa11.45□□□□□ -0.58
VPS33A-202ENST00000451053 CNIH3Q8TBE1 160 aa11.45□□□□□ -0.58
VPS33A-202ENST00000451053 KISS1RQ969F8 398 aaPredicted RBP11.45□□□□□ -0.58
VPS33A-202ENST00000451053 MCHR2Q969V1 340 aa11.45□□□□□ -0.58
VPS33A-202ENST00000451053 ALG12Q9BV10 488 aa11.45□□□□□ -0.58
VPS33A-202ENST00000451053 TAS2R16Q9NYV7 291 aa11.45□□□□□ -0.58
VPS33A-202ENST00000451053 H2AFY2Q9P0M6 372 aaPredicted RBP11.45□□□□□ -0.58
VPS33A-202ENST00000451053 MYRFQ9Y2G1 1151 aa11.45□□□□□ -0.58
VPS33A-202ENST00000451053 GPR52Q9Y2T5 361 aa11.45□□□□□ -0.58
VPS33A-202ENST00000451053 ALPK2Q86TB3 2170 aa11.44□□□□□ -0.58
VPS33A-202ENST00000451053 DOPEY1Q5JWR5 2465 aa11.44□□□□□ -0.58
VPS33A-202ENST00000451053 TENM4Q6N022 2769 aa11.44□□□□□ -0.58
VPS33A-202ENST00000451053 SLC22A23A1A5C7 686 aa11.44□□□□□ -0.58
VPS33A-202ENST00000451053 PRSS37A4D1T9 235 aa11.44□□□□□ -0.58
VPS33A-202ENST00000451053 WBP4O75554 376 aaKnown RBP11.44□□□□□ -0.58
VPS33A-202ENST00000451053 SEC14L2O76054 403 aa11.44□□□□□ -0.58
VPS33A-202ENST00000451053 IL32P24001 234 aa11.44□□□□□ -0.58
VPS33A-202ENST00000451053 SORDQ00796 357 aa11.44□□□□□ -0.58
VPS33A-202ENST00000451053 DBPQ10586 325 aaPredicted RBP11.44□□□□□ -0.58
VPS33A-202ENST00000451053 TMED1Q13445 227 aa11.44□□□□□ -0.58
VPS33A-202ENST00000451053 CRMP1Q14194 572 aa11.44□□□□□ -0.58
VPS33A-202ENST00000451053 GABRA6Q16445 453 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms