RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 RRM2BQ7LG56 351 aa15.16■□□□□ 0.02
FAM3A-216ENST00000449971 CDK20Q8IZL9 346 aa15.16■□□□□ 0.02
FAM3A-216ENST00000449971 SLC22A24Q8N4F4 322 aa15.16■□□□□ 0.02
FAM3A-216ENST00000449971 RBM15BQ8NDT2 890 aaKnown RBP15.16■□□□□ 0.02
FAM3A-216ENST00000449971 NUP37Q8NFH4 326 aa15.16■□□□□ 0.02
FAM3A-216ENST00000449971 OR51A7Q8NH64 312 aa15.16■□□□□ 0.02
FAM3A-216ENST00000449971 MCHR2Q969V1 340 aa15.16■□□□□ 0.02
FAM3A-216ENST00000449971 MS4A3Q96HJ5 214 aa15.16■□□□□ 0.02
FAM3A-216ENST00000449971 SH3GL3Q99963 347 aa15.16■□□□□ 0.02
FAM3A-216ENST00000449971 MRPL13Q9BYD1 178 aaKnown RBP15.16■□□□□ 0.02
FAM3A-216ENST00000449971 ARL8BQ9NVJ2 186 aa15.16■□□□□ 0.02
FAM3A-216ENST00000449971 TMEM38BQ9NVV0 291 aa15.16■□□□□ 0.02
FAM3A-216ENST00000449971 TAGLN3Q9UI15 199 aa15.16■□□□□ 0.02
FAM3A-216ENST00000449971 FAM32AQ9Y421 112 aaKnown RBP15.16■□□□□ 0.02
FAM3A-216ENST00000449971 ENPP4Q9Y6X5 453 aa15.16■□□□□ 0.02
FAM3A-216ENST00000449971 HEATR1Q9H583 2144 aaKnown RBP15.16■□□□□ 0.02
FAM3A-216ENST00000449971 A0A087WUU8 490 aa15.15■□□□□ 0.02
FAM3A-216ENST00000449971 EFCAB9A8MZ26 197 aa15.15■□□□□ 0.02
FAM3A-216ENST00000449971 B9A039 149 aa15.15■□□□□ 0.02
FAM3A-216ENST00000449971 ENTPD5O75356 428 aa15.15■□□□□ 0.02
FAM3A-216ENST00000449971 DCTN3O75935 186 aa15.15■□□□□ 0.02
FAM3A-216ENST00000449971 FARS2O95363 451 aaKnown RBP15.15■□□□□ 0.02
FAM3A-216ENST00000449971 TSPAN19P0C672 248 aa15.15■□□□□ 0.02
FAM3A-216ENST00000449971 ZNF84P51523 738 aa15.15■□□□□ 0.02
FAM3A-216ENST00000449971 PRKCDQ05655 676 aa15.15■□□□□ 0.02
FAM3A-216ENST00000449971 TOP3AQ13472 1001 aaPredicted RBP15.15■□□□□ 0.02
FAM3A-216ENST00000449971 DAG1Q14118 895 aa15.15■□□□□ 0.02
FAM3A-216ENST00000449971 CARTPTQ16568 116 aa15.15■□□□□ 0.02
FAM3A-216ENST00000449971 HIST3H3Q16695 136 aa15.15■□□□□ 0.02
FAM3A-216ENST00000449971 ARMC4Q5T2S8 1044 aa15.15■□□□□ 0.02
FAM3A-216ENST00000449971 FAM166AQ6J272 317 aa15.15■□□□□ 0.02
FAM3A-216ENST00000449971 RNF113BQ8IZP6 322 aaKnown RBP15.15■□□□□ 0.02
FAM3A-216ENST00000449971 FAM156AQ8NDB6 213 aa15.15■□□□□ 0.02
FAM3A-216ENST00000449971 NOXO1Q8NFA2 376 aa15.15■□□□□ 0.02
FAM3A-216ENST00000449971 FGFBP3Q8TAT2 258 aa15.15■□□□□ 0.02
FAM3A-216ENST00000449971 ACOT11Q8WXI4 607 aaPredicted RBP15.15■□□□□ 0.02
FAM3A-216ENST00000449971 TXNIPQ9H3M7 391 aa15.15■□□□□ 0.02
FAM3A-216ENST00000449971 DENND2DQ9H6A0 471 aaPredicted RBP15.15■□□□□ 0.02
FAM3A-216ENST00000449971 RNF121Q9H920 327 aa15.15■□□□□ 0.02
FAM3A-216ENST00000449971 NMNAT1Q9HAN9 279 aaPredicted RBP15.15■□□□□ 0.02
FAM3A-216ENST00000449971 ZNF224Q9NZL3 707 aa15.15■□□□□ 0.02
FAM3A-216ENST00000449971 STX18Q9P2W9 335 aaKnown RBP15.15■□□□□ 0.02
FAM3A-216ENST00000449971 HIF3AQ9Y2N7 669 aa15.15■□□□□ 0.02
FAM3A-216ENST00000449971 TRAV27A0A087WT01 109 aa15.14■□□□□ 0.01
FAM3A-216ENST00000449971 CENPBD1B2RD01 187 aa15.14■□□□□ 0.01
FAM3A-216ENST00000449971 ZNF14P17017 642 aaPredicted RBP15.14■□□□□ 0.01
FAM3A-216ENST00000449971 NPR2P20594 1047 aa15.14■□□□□ 0.01
FAM3A-216ENST00000449971 HNF1AP20823 631 aa15.14■□□□□ 0.01
FAM3A-216ENST00000449971 GZMKP49863 264 aa15.14■□□□□ 0.01
FAM3A-216ENST00000449971 EFNA4P52798 201 aa15.14■□□□□ 0.01
FAM3A-216ENST00000449971 CTXN1P60606 82 aa15.14■□□□□ 0.01
FAM3A-216ENST00000449971 MXRA7P84157 204 aa15.14■□□□□ 0.01
FAM3A-216ENST00000449971 RAB39AQ14964 217 aa15.14■□□□□ 0.01
FAM3A-216ENST00000449971 LIPNQ5VXI9 398 aa15.14■□□□□ 0.01
FAM3A-216ENST00000449971 KRT80Q6KB66 452 aa15.14■□□□□ 0.01
FAM3A-216ENST00000449971 MBOAT2Q6ZWT7 520 aa15.14■□□□□ 0.01
FAM3A-216ENST00000449971 TSEN54Q7Z6J9 526 aaKnown RBP15.14■□□□□ 0.01
FAM3A-216ENST00000449971 OAFQ86UD1 273 aa15.14■□□□□ 0.01
FAM3A-216ENST00000449971 IGFN1Q86VF2 1251 aa15.14■□□□□ 0.01
FAM3A-216ENST00000449971 OR4K5Q8NGD3 323 aa15.14■□□□□ 0.01
FAM3A-216ENST00000449971 C10orf105Q8TEF2 133 aa15.14■□□□□ 0.01
FAM3A-216ENST00000449971 ZNF75AQ96N20 296 aa15.14■□□□□ 0.01
FAM3A-216ENST00000449971 CDRT15Q96T59 188 aa15.14■□□□□ 0.01
FAM3A-216ENST00000449971 VRK1Q99986 396 aaPredicted RBP15.14■□□□□ 0.01
FAM3A-216ENST00000449971 ZNF442Q9H7R0 627 aa15.14■□□□□ 0.01
FAM3A-216ENST00000449971 DCAF13Q9NV06 445 aaKnown RBP15.14■□□□□ 0.01
FAM3A-216ENST00000449971 ZNF346Q9UL40 294 aaKnown RBP15.14■□□□□ 0.01
FAM3A-216ENST00000449971 SAMD4AQ9UPU9 718 aaKnown RBP15.14■□□□□ 0.01
FAM3A-216ENST00000449971 SPEF1Q9Y4P9 236 aa15.14■□□□□ 0.01
FAM3A-216ENST00000449971 PDE5AO76074 875 aa15.13■□□□□ 0.01
FAM3A-216ENST00000449971 PRSS23O95084 383 aa15.13■□□□□ 0.01
FAM3A-216ENST00000449971 NR4A1P22736 598 aa15.13■□□□□ 0.01
FAM3A-216ENST00000449971 MSX2P35548 267 aaPredicted RBP15.13■□□□□ 0.01
FAM3A-216ENST00000449971 RPL27P61353 136 aaKnown RBP15.13■□□□□ 0.01
FAM3A-216ENST00000449971 SNTB2Q13425 540 aaKnown RBP15.13■□□□□ 0.01
FAM3A-216ENST00000449971 TAF11Q15544 211 aa15.13■□□□□ 0.01
FAM3A-216ENST00000449971 EFNB3Q15768 340 aa15.13■□□□□ 0.01
FAM3A-216ENST00000449971 TMEM53Q6P2H8 277 aa15.13■□□□□ 0.01
FAM3A-216ENST00000449971 SLC16A14Q7RTX9 510 aa15.13■□□□□ 0.01
FAM3A-216ENST00000449971 PGAM4Q8N0Y7 254 aa15.13■□□□□ 0.01
FAM3A-216ENST00000449971 OR13C2Q8NGS9 318 aa15.13■□□□□ 0.01
FAM3A-216ENST00000449971 HDAC2Q92769 488 aaKnown RBP15.13■□□□□ 0.01
FAM3A-216ENST00000449971 C1orf159Q96HA4 380 aa15.13■□□□□ 0.01
FAM3A-216ENST00000449971 SEPHS2Q99611 448 aa15.13■□□□□ 0.01
FAM3A-216ENST00000449971 NDUFAF4Q9P032 175 aa15.13■□□□□ 0.01
FAM3A-216ENST00000449971 FBXL3Q9UKT7 428 aa15.13■□□□□ 0.01
FAM3A-216ENST00000449971 V9GYQ6 96 aa15.13■□□□□ 0.01
FAM3A-216ENST00000449971 NPIPB13A6NJU9 1138 aa15.12■□□□□ 0.01
FAM3A-216ENST00000449971 NPIPB4C9JG80 1138 aa15.12■□□□□ 0.01
FAM3A-216ENST00000449971 hCG_2039718K7EN88 272 aa15.12■□□□□ 0.01
FAM3A-216ENST00000449971 SLC2A10O95528 541 aa15.12■□□□□ 0.01
FAM3A-216ENST00000449971 SERPINA5P05154 406 aa15.12■□□□□ 0.01
FAM3A-216ENST00000449971 H1F0P07305 194 aaKnown RBP15.12■□□□□ 0.01
FAM3A-216ENST00000449971 ZNF35P13682 527 aa15.12■□□□□ 0.01
FAM3A-216ENST00000449971 THBS2P35442 1172 aa15.12■□□□□ 0.01
FAM3A-216ENST00000449971 GPR4P46093 362 aa15.12■□□□□ 0.01
FAM3A-216ENST00000449971 CD47Q08722 323 aa15.12■□□□□ 0.01
FAM3A-216ENST00000449971 KRT72Q14CN4 511 aa15.12■□□□□ 0.01
FAM3A-216ENST00000449971 ANKDD1AQ495B1 522 aa15.12■□□□□ 0.01
FAM3A-216ENST00000449971 FGD3Q5JSP0 725 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms