RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 SH3PXD2BA1X283 911 aa12.68□□□□□ -0.38
USP39-206ENST00000448971 CENPBD1B2RD01 187 aa12.68□□□□□ -0.38
USP39-206ENST00000448971 DHHO43323 396 aa12.68□□□□□ -0.38
USP39-206ENST00000448971 ENTPD5O75356 428 aa12.68□□□□□ -0.38
USP39-206ENST00000448971 CRLF1O75462 422 aa12.68□□□□□ -0.38
USP39-206ENST00000448971 FARS2O95363 451 aaKnown RBP12.68□□□□□ -0.38
USP39-206ENST00000448971 RAB36O95755 333 aa12.68□□□□□ -0.38
USP39-206ENST00000448971 IGHMP01871 453 aa12.68□□□□□ -0.38
USP39-206ENST00000448971 HLA-HP01893 362 aa12.68□□□□□ -0.38
USP39-206ENST00000448971 CRYAAP02489 173 aa12.68□□□□□ -0.38
USP39-206ENST00000448971 ACVR1BP36896 505 aa12.68□□□□□ -0.38
USP39-206ENST00000448971 OMPP47874 163 aa12.68□□□□□ -0.38
USP39-206ENST00000448971 LIMS1P48059 325 aa12.68□□□□□ -0.38
USP39-206ENST00000448971 RPL27P61353 136 aaKnown RBP12.68□□□□□ -0.38
USP39-206ENST00000448971 MS4A2Q01362 244 aa12.68□□□□□ -0.38
USP39-206ENST00000448971 CHRNB3Q05901 458 aa12.68□□□□□ -0.38
USP39-206ENST00000448971 GSG1Q2KHT4 349 aa12.68□□□□□ -0.38
USP39-206ENST00000448971 ZBED5Q49AG3 693 aa12.68□□□□□ -0.38
USP39-206ENST00000448971 IQCCQ4KMZ1 466 aa12.68□□□□□ -0.38
USP39-206ENST00000448971 ARMC4Q5T2S8 1044 aa12.68□□□□□ -0.38
USP39-206ENST00000448971 MDP1Q86V88 176 aa12.68□□□□□ -0.38
USP39-206ENST00000448971 CCDC36Q8IYA8 594 aa12.68□□□□□ -0.38
USP39-206ENST00000448971 FANK1Q8TC84 345 aa12.68□□□□□ -0.38
USP39-206ENST00000448971 SMAP2Q8WU79 429 aaPredicted RBP12.68□□□□□ -0.38
USP39-206ENST00000448971 HDAC2Q92769 488 aaKnown RBP12.68□□□□□ -0.38
USP39-206ENST00000448971 MCHR2Q969V1 340 aa12.68□□□□□ -0.38
USP39-206ENST00000448971 TSPAN32Q96QS1 320 aa12.68□□□□□ -0.38
USP39-206ENST00000448971 KATNB1Q9BVA0 655 aa12.68□□□□□ -0.38
USP39-206ENST00000448971 MAGIXQ9H6Y5 334 aa12.68□□□□□ -0.38
USP39-206ENST00000448971 ZNF701Q9NV72 531 aaPredicted RBP12.68□□□□□ -0.38
USP39-206ENST00000448971 MOKQ9UQ07 419 aa12.68□□□□□ -0.38
USP39-206ENST00000448971 ALPK2Q86TB3 2170 aa12.67□□□□□ -0.38
USP39-206ENST00000448971 ZNF503-AS2A6NEH8 195 aa12.67□□□□□ -0.38
USP39-206ENST00000448971 UNC119BA6NIH7 251 aa12.67□□□□□ -0.38
USP39-206ENST00000448971 A6NIZ1 184 aa12.67□□□□□ -0.38
USP39-206ENST00000448971 NDUFB2O95178 105 aa12.67□□□□□ -0.38
USP39-206ENST00000448971 SLC2A10O95528 541 aa12.67□□□□□ -0.38
USP39-206ENST00000448971 CECR9P0C854 216 aa12.67□□□□□ -0.38
USP39-206ENST00000448971 ARR3P36575 388 aa12.67□□□□□ -0.38
USP39-206ENST00000448971 IFNGR2P38484 337 aa12.67□□□□□ -0.38
USP39-206ENST00000448971 PTDSS1P48651 473 aaKnown RBP12.67□□□□□ -0.38
USP39-206ENST00000448971 RAP1BP61224 184 aa12.67□□□□□ -0.38
USP39-206ENST00000448971 RAP1AP62834 184 aa12.67□□□□□ -0.38
USP39-206ENST00000448971 ERVK-25P63136 954 aa12.67□□□□□ -0.38
USP39-206ENST00000448971 FMODQ06828 376 aa12.67□□□□□ -0.38
USP39-206ENST00000448971 B3GLCTQ6Y288 498 aa12.67□□□□□ -0.38
USP39-206ENST00000448971 LRRC75AQ8NAA5 344 aa12.67□□□□□ -0.38
USP39-206ENST00000448971 HTRA1Q92743 480 aa12.67□□□□□ -0.38
USP39-206ENST00000448971 POP5Q969H6 163 aaKnown RBP12.67□□□□□ -0.38
USP39-206ENST00000448971 GTPBP3Q969Y2 492 aaKnown RBP12.67□□□□□ -0.38
USP39-206ENST00000448971 ZNF570Q96NI8 536 aa12.67□□□□□ -0.38
USP39-206ENST00000448971 BTBD10Q9BSF8 475 aa12.67□□□□□ -0.38
USP39-206ENST00000448971 ALG12Q9BV10 488 aa12.67□□□□□ -0.38
USP39-206ENST00000448971 MRPL13Q9BYD1 178 aaKnown RBP12.67□□□□□ -0.38
USP39-206ENST00000448971 SEC61A2Q9H9S3 476 aa12.67□□□□□ -0.38
USP39-206ENST00000448971 TMEM38BQ9NVV0 291 aa12.67□□□□□ -0.38
USP39-206ENST00000448971 GRHPRQ9UBQ7 328 aa12.67□□□□□ -0.38
USP39-206ENST00000448971 ZNF346Q9UL40 294 aaKnown RBP12.67□□□□□ -0.38
USP39-206ENST00000448971 ADAM18Q9Y3Q7 739 aa12.67□□□□□ -0.38
USP39-206ENST00000448971 CADP27708 2225 aa12.67□□□□□ -0.38
USP39-206ENST00000448971 H7C1C5 153 aa12.66□□□□□ -0.38
USP39-206ENST00000448971 TNFRSF11BO00300 401 aa12.66□□□□□ -0.38
USP39-206ENST00000448971 XKRYO14609 159 aa12.66□□□□□ -0.38
USP39-206ENST00000448971 DNAJC8O75937 253 aaPredicted RBP12.66□□□□□ -0.38
USP39-206ENST00000448971 UBL3O95164 117 aa12.66□□□□□ -0.38
USP39-206ENST00000448971 IGKV3-15P01624 115 aa12.66□□□□□ -0.38
USP39-206ENST00000448971 SOD3P08294 240 aa12.66□□□□□ -0.38
USP39-206ENST00000448971 CELA3BP08861 270 aa12.66□□□□□ -0.38
USP39-206ENST00000448971 OR8G3PP0DMU2 310 aa12.66□□□□□ -0.38
USP39-206ENST00000448971 CBR1P16152 277 aa12.66□□□□□ -0.38
USP39-206ENST00000448971 MAGEA2P43356 314 aa12.66□□□□□ -0.38
USP39-206ENST00000448971 LCN6P62502 163 aa12.66□□□□□ -0.38
USP39-206ENST00000448971 NAAAQ02083 359 aa12.66□□□□□ -0.38
USP39-206ENST00000448971 PIGFQ07326 219 aa12.66□□□□□ -0.38
USP39-206ENST00000448971 FHL1Q13642 323 aa12.66□□□□□ -0.38
USP39-206ENST00000448971 FLOT2Q14254 428 aa12.66□□□□□ -0.38
USP39-206ENST00000448971 LRFN4Q6PJG9 635 aa12.66□□□□□ -0.38
USP39-206ENST00000448971 ZNF627Q7L945 461 aa12.66□□□□□ -0.38
USP39-206ENST00000448971 PIWIL3Q7Z3Z3 882 aaKnown RBP12.66□□□□□ -0.38
USP39-206ENST00000448971 SLC22A24Q8N4F4 322 aa12.66□□□□□ -0.38
USP39-206ENST00000448971 ZNF519Q8TB69 540 aa12.66□□□□□ -0.38
USP39-206ENST00000448971 FNDC8Q8TC99 324 aa12.66□□□□□ -0.38
USP39-206ENST00000448971 NSMAFQ92636 917 aa12.66□□□□□ -0.38
USP39-206ENST00000448971 SLC7A6OSQ96CW6 309 aaPredicted RBP12.66□□□□□ -0.38
USP39-206ENST00000448971 DHRS9Q9BPW9 319 aa12.66□□□□□ -0.38
USP39-206ENST00000448971 FUZQ9BT04 418 aa12.66□□□□□ -0.38
USP39-206ENST00000448971 NOX3Q9HBY0 568 aa12.66□□□□□ -0.38
USP39-206ENST00000448971 CRNNQ9UBG3 495 aaPredicted RBP12.66□□□□□ -0.38
USP39-206ENST00000448971 IL20RAQ9UHF4 553 aa12.66□□□□□ -0.38
USP39-206ENST00000448971 SIGLEC7Q9Y286 467 aa12.66□□□□□ -0.38
USP39-206ENST00000448971 LYVE1Q9Y5Y7 322 aa12.66□□□□□ -0.38
USP39-206ENST00000448971 TEX13CA0A0J9YWL9 993 aa12.65□□□□□ -0.38
USP39-206ENST00000448971 E7EQL1 145 aa12.65□□□□□ -0.38
USP39-206ENST00000448971 TMCC2O75069 709 aa12.65□□□□□ -0.38
USP39-206ENST00000448971 KRT36O76013 467 aa12.65□□□□□ -0.38
USP39-206ENST00000448971 IGLV1-44P01699 117 aa12.65□□□□□ -0.38
USP39-206ENST00000448971 CD14P08571 375 aa12.65□□□□□ -0.38
USP39-206ENST00000448971 DANCRP0C864 163 aa12.65□□□□□ -0.38
USP39-206ENST00000448971 RAP2AP10114 183 aa12.65□□□□□ -0.38
USP39-206ENST00000448971 FPR3P25089 353 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms