RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 KLHL17Q6TDP4 642 aa6.79□□□□□ -1.32
SMARCE1-206ENST00000447024 TMEM108Q6UXF1 575 aa6.79□□□□□ -1.32
SMARCE1-206ENST00000447024 CASP12Q6UXS9 341 aa6.79□□□□□ -1.32
SMARCE1-206ENST00000447024 ZNF704Q6ZNC4 412 aaPredicted RBP6.79□□□□□ -1.32
SMARCE1-206ENST00000447024 CREB3L2Q70SY1 520 aa6.79□□□□□ -1.32
SMARCE1-206ENST00000447024 SPATA21Q7Z572 469 aa6.79□□□□□ -1.32
SMARCE1-206ENST00000447024 SNX32Q86XE0 403 aa6.79□□□□□ -1.32
SMARCE1-206ENST00000447024 CCDC36Q8IYA8 594 aa6.79□□□□□ -1.32
SMARCE1-206ENST00000447024 UBE2J2Q8N2K1 259 aa6.79□□□□□ -1.32
SMARCE1-206ENST00000447024 TMEM99Q8N816 258 aa6.79□□□□□ -1.32
SMARCE1-206ENST00000447024 MAGEE2Q8TD90 523 aaPredicted RBP6.79□□□□□ -1.32
SMARCE1-206ENST00000447024 LZICQ8WZA0 190 aa6.79□□□□□ -1.32
SMARCE1-206ENST00000447024 SLC41A3Q96GZ6 507 aa6.79□□□□□ -1.32
SMARCE1-206ENST00000447024 LRR1Q96L50 414 aa6.79□□□□□ -1.32
SMARCE1-206ENST00000447024 OXGR1Q96P68 337 aa6.79□□□□□ -1.32
SMARCE1-206ENST00000447024 MCHR1Q99705 422 aa6.79□□□□□ -1.32
SMARCE1-206ENST00000447024 ARHGDIGQ99819 225 aa6.79□□□□□ -1.32
SMARCE1-206ENST00000447024 PTDSS2Q9BVG9 487 aa6.79□□□□□ -1.32
SMARCE1-206ENST00000447024 SLCO5A1Q9H2Y9 848 aa6.79□□□□□ -1.32
SMARCE1-206ENST00000447024 EFCAB1Q9HAE3 211 aa6.79□□□□□ -1.32
SMARCE1-206ENST00000447024 ADPRHL2Q9NX46 363 aa6.79□□□□□ -1.32
SMARCE1-206ENST00000447024 MRPL39Q9NYK5 338 aaKnown RBP6.79□□□□□ -1.32
SMARCE1-206ENST00000447024 C6orf203Q9P0P8 240 aaPredicted RBP6.79□□□□□ -1.32
SMARCE1-206ENST00000447024 ITGB1BP2Q9UKP3 347 aa6.79□□□□□ -1.32
SMARCE1-206ENST00000447024 PLEKHA6Q9Y2H5 1048 aa6.79□□□□□ -1.32
SMARCE1-206ENST00000447024 AMDHD2Q9Y303 409 aa6.79□□□□□ -1.32
SMARCE1-206ENST00000447024 RNF115Q9Y4L5 304 aa6.79□□□□□ -1.32
SMARCE1-206ENST00000447024 C2CD3Q4AC94 2353 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 IGKV1D-42A0A075B6H8 117 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 LOC100653049A0A140TA62 436 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 ELOVL7A1L3X0 281 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 SNX3O60493 162 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 LYZL6O75951 148 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 KRT34O76011 436 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 COX4I1P13073 169 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 PTAFRP25105 342 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 AQP1P29972 269 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 KDELR2P33947 212 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 RBM34P42696 430 aaKnown RBP6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 RPS5P46782 204 aaKnown RBP6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 CDH12P55289 794 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 HOXC5Q00444 222 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 FAPQ12884 760 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 BNIP2Q12982 314 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 C1DQ13901 141 aaKnown RBP6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 SELPLGQ14242 412 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 NPTX1Q15818 432 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 SRSF7Q16629 238 aaKnown RBP eCLIP6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 C3orf36Q3SXR2 165 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 AAED1Q7RTV5 226 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 AMIGO2Q86SJ2 522 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 GPAT4Q86UL3 456 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 TGIF2LYQ8IUE0 185 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 ZIC4Q8N9L1 334 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 SMYD1Q8NB12 490 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 OR2T12Q8NG77 320 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 GPR32P1Q8NGA4 272 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 OR6T1Q8NGN1 323 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 TAAR8Q969N4 342 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 KTI12Q96EK9 354 aaPredicted RBP6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 ZC3HAV1LQ96H79 300 aaKnown RBP6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 HS6ST2Q96MM7 605 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 ZNF583Q96ND8 569 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 ZNF426Q9BUY5 554 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 RSPO3Q9BXY4 272 aaPredicted RBP6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 CXorf56Q9H5V9 222 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 FKRPQ9H9S5 495 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 SLC7A10Q9NS82 523 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 FAIMQ9NVQ4 179 aa6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 FLNAP21333 2647 aaKnown RBP6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 RAI1Q7Z5J4 1906 aaPredicted RBP6.78□□□□□ -1.32
SMARCE1-206ENST00000447024 A0A1W2PPR1 153 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 GMNCA6NCL1 334 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 ZNF587BE7ETH6 402 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 DYNC1I1O14576 645 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 MGRN1O60291 552 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 TPST2O60704 377 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 RAMP1O60894 148 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 SMPD2O60906 423 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 SLC43A1O75387 559 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 KRT33AO76009 404 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 ZNF432O94892 652 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 OR5F1O95221 314 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 ITGA5P08648 1049 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 KLK2P20151 261 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 GRPRP30550 384 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 SLC6A9P48067 706 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 PRPS1P60891 318 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 PUDPQ08623 228 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 ZP4Q12836 540 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 ETFDHQ16134 617 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 GABRA6Q16445 453 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 GLIPR1L2Q4G1C9 344 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 ENTPD8Q5MY95 495 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 TSPO2Q5TGU0 170 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 TTC33Q6PID6 262 aaPredicted RBP6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 KLHL24Q6TFL4 600 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 HDDC2Q7Z4H3 204 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 PXKQ7Z7A4 578 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 CPLX4Q7Z7G2 160 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms