RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 ZNF133P52736 654 aaPredicted RBP12.87□□□□□ -0.35
HDAC4-204ENST00000446876 ATP5J2P56134 94 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 RAB1AP62820 205 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 HGFACQ04756 655 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 C3orf36Q3SXR2 165 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 DNAL1Q4LDG9 190 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 MESTQ5EB52 335 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 SLC25A47Q6Q0C1 308 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 VHLLQ6RSH7 139 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 FAM122BQ7Z309 247 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 YTHDF3Q7Z739 585 aaKnown RBP12.87□□□□□ -0.35
HDAC4-204ENST00000446876 DTX2Q86UW9 622 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 CCDC36Q8IYA8 594 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 LRRC75A-AS1Q8N1F1 130 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 LRRC18Q8N456 261 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 ARIH2OSQ8N7S6 290 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 FAM169BQ8N8A8 192 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 OR9Q2Q8NGE9 314 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 NANOS1Q8WY41 292 aaKnown RBP12.87□□□□□ -0.35
HDAC4-204ENST00000446876 RASD2Q96D21 266 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 LRGUKQ96M69 825 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 ZNF75AQ96N20 296 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 ZNF570Q96NI8 536 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 ALG12Q9BV10 488 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 MAGIXQ9H6Y5 334 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 KRCC1Q9NPI7 259 aaPredicted RBP12.87□□□□□ -0.35
HDAC4-204ENST00000446876 ZNF701Q9NV72 531 aaPredicted RBP12.87□□□□□ -0.35
HDAC4-204ENST00000446876 FAIMQ9NVQ4 179 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 TMCC3Q9ULS5 477 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 LYVE1Q9Y5Y7 322 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 TEP1Q99973 2627 aaKnown RBP12.87□□□□□ -0.35
HDAC4-204ENST00000446876 TEX13CA0A0J9YWL9 993 aa12.86□□□□□ -0.35
HDAC4-204ENST00000446876 A6NIZ1 184 aa12.86□□□□□ -0.35
HDAC4-204ENST00000446876 TNFRSF11BO00300 401 aa12.86□□□□□ -0.35
HDAC4-204ENST00000446876 IMPA2O14732 288 aa12.86□□□□□ -0.35
HDAC4-204ENST00000446876 NDUFS7O75251 213 aa12.86□□□□□ -0.35
HDAC4-204ENST00000446876 UBL3O95164 117 aa12.86□□□□□ -0.35
HDAC4-204ENST00000446876 RAB36O95755 333 aa12.86□□□□□ -0.35
HDAC4-204ENST00000446876 ZNF14P17017 642 aaPredicted RBP12.86□□□□□ -0.35
HDAC4-204ENST00000446876 PAX7P23759 505 aa12.86□□□□□ -0.35
HDAC4-204ENST00000446876 RAP1BP61224 184 aa12.86□□□□□ -0.35
HDAC4-204ENST00000446876 RAP1AP62834 184 aa12.86□□□□□ -0.35
HDAC4-204ENST00000446876 CHRNB3Q05901 458 aa12.86□□□□□ -0.35
HDAC4-204ENST00000446876 BNIP1Q12981 228 aa12.86□□□□□ -0.35
HDAC4-204ENST00000446876 RAB39AQ14964 217 aa12.86□□□□□ -0.35
HDAC4-204ENST00000446876 AGAP6Q5VW22 663 aa12.86□□□□□ -0.35
HDAC4-204ENST00000446876 FAM205BPQ63HN1 556 aa12.86□□□□□ -0.35
HDAC4-204ENST00000446876 C11orf71Q6IPW1 123 aa12.86□□□□□ -0.35
HDAC4-204ENST00000446876 PGBD2Q6P3X8 592 aa12.86□□□□□ -0.35
HDAC4-204ENST00000446876 PGM2L1Q6PCE3 622 aa12.86□□□□□ -0.35
HDAC4-204ENST00000446876 ADGRG5Q8IZF4 528 aa12.86□□□□□ -0.35
HDAC4-204ENST00000446876 FBXL14Q8N1E6 418 aa12.86□□□□□ -0.35
HDAC4-204ENST00000446876 MUC15Q8N387 334 aa12.86□□□□□ -0.35
HDAC4-204ENST00000446876 OR4C15Q8NGM1 316 aa12.86□□□□□ -0.35
HDAC4-204ENST00000446876 FANK1Q8TC84 345 aa12.86□□□□□ -0.35
HDAC4-204ENST00000446876 BTBD10Q9BSF8 475 aa12.86□□□□□ -0.35
HDAC4-204ENST00000446876 CACNG6Q9BXT2 260 aa12.86□□□□□ -0.35
HDAC4-204ENST00000446876 GRHPRQ9UBQ7 328 aa12.86□□□□□ -0.35
HDAC4-204ENST00000446876 GDF2Q9UK05 429 aaPredicted RBP12.86□□□□□ -0.35
HDAC4-204ENST00000446876 A0A1W2PPL8 197 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 SOCS2O14508 198 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 DNAJC8O75937 253 aaPredicted RBP12.85□□□□□ -0.35
HDAC4-204ENST00000446876 FARS2O95363 451 aaKnown RBP12.85□□□□□ -0.35
HDAC4-204ENST00000446876 STAMBPO95630 424 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 PPP1R3DO95685 299 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 PAX1P15863 534 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 FPR3P25089 353 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 TRAP1Q12931 704 aaKnown RBP12.85□□□□□ -0.35
HDAC4-204ENST00000446876 KRR1Q13601 381 aaKnown RBP12.85□□□□□ -0.35
HDAC4-204ENST00000446876 ETFDHQ16134 617 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 SGCAQ16586 387 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 FAM98BQ52LJ0 330 aaKnown RBP12.85□□□□□ -0.35
HDAC4-204ENST00000446876 SHEQ5VZ18 495 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 KRT80Q6KB66 452 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 ZNF544Q6NX49 715 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 SMARCD3Q6STE5 483 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 SLC16A14Q7RTX9 510 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 ZNF584Q8IVC4 421 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 NABP1Q96AH0 204 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 FBXO17Q96EF6 278 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 Q96MF0 132 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 FOXN4Q96NZ1 517 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 RBP7Q96R05 134 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 GPX7Q96SL4 187 aaPredicted RBP12.85□□□□□ -0.35
HDAC4-204ENST00000446876 TMUB1Q9BVT8 246 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 CADM1Q9BY67 442 aaKnown RBP12.85□□□□□ -0.35
HDAC4-204ENST00000446876 TRIM15Q9C019 465 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 NDEL1Q9GZM8 345 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 OR52D1Q9H346 318 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 RNF121Q9H920 327 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 SMURF2Q9HAU4 748 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 MOV10Q9HCE1 1003 aaKnown RBP12.85□□□□□ -0.35
HDAC4-204ENST00000446876 NRIP3Q9NQ35 241 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 CBLN4Q9NTU7 201 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 IER3IP1Q9Y5U9 82 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 U3KQV3 271 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 ARFGEF3Q5TH69 2177 aa12.85□□□□□ -0.35
HDAC4-204ENST00000446876 MAP1AP78559 2803 aaPredicted RBP12.84□□□□□ -0.35
HDAC4-204ENST00000446876 SLC22A23A1A5C7 686 aa12.84□□□□□ -0.35
HDAC4-204ENST00000446876 XKRYO14609 159 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms