RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 SAV1Q9H4B6 383 aaPredicted RBP15.19■□□□□ 0.02
TCOF1-206ENST00000445265 TAS2R5Q9NYW4 299 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 MMP17Q9ULZ9 603 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 PIKFYVEQ9Y2I7 2098 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 SLC22A23A1A5C7 686 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 CCDC85CA6NKD9 419 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 P2RY10O00398 339 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 DVL2O14641 736 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 HOXB3P14651 431 aaPredicted RBP15.19■□□□□ 0.02
TCOF1-206ENST00000445265 EXOSC2Q13868 293 aaKnown RBP15.19■□□□□ 0.02
TCOF1-206ENST00000445265 CCDC71LQ8N9Z2 235 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 TOMM40LQ969M1 308 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 RAB3CQ96E17 227 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 ZC3HAV1LQ96H79 300 aaKnown RBP15.19■□□□□ 0.02
TCOF1-206ENST00000445265 CTSVO60911 334 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 TSPAN15O95858 294 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 PER3P56645 1201 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 ZXDCQ2QGD7 858 aaPredicted RBP15.19■□□□□ 0.02
TCOF1-206ENST00000445265 GLYR1Q49A26 553 aaPredicted RBP15.19■□□□□ 0.02
TCOF1-206ENST00000445265 SSX6Q7RTT6 188 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 LINC00346Q8IVM7 164 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 ZNF679Q8IYX0 411 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 BORCS8Q96FH0 119 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 DHRS1Q96LJ7 313 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 OR10A2Q9H208 303 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 FAM86C1Q9NVL1 165 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 UBE2J1Q9Y385 318 aaPredicted RBP15.19■□□□□ 0.02
TCOF1-206ENST00000445265 P04436 131 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 CAMLGP49069 296 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 P2RX1P51575 399 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 OR2G2Q8NGZ5 317 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 NUDT22Q9BRQ3 303 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 ADGRL4Q9HBW9 690 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 H0YIG0 161 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 LCATP04180 440 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 CLDN6P56747 220 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 ACKR1Q16570 336 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 PAPD4Q6PIY7 484 aaKnown RBP15.18■□□□□ 0.02
TCOF1-206ENST00000445265 SLC6A18Q96N87 628 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 CHRDQ9H2X0 955 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 FGF21Q9NSA1 209 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 A0A1W2PPV9 198 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 ZNF254O75437 659 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 ZNF28P17035 718 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 BCL2A1Q16548 175 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 TEX261Q6UWH6 196 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 DCXRQ7Z4W1 244 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 SULF2Q8IWU5 870 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 SVBPQ8N300 66 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 PXT1Q8NFP0 134 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 PAQR8Q8TEZ7 354 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 ZMAT3Q9HA38 289 aaKnown RBP15.18■□□□□ 0.02
TCOF1-206ENST00000445265 WSB2Q9NYS7 404 aaPredicted RBP15.18■□□□□ 0.02
TCOF1-206ENST00000445265 RPH3AQ9Y2J0 694 aaPredicted RBP15.18■□□□□ 0.02
TCOF1-206ENST00000445265 COA3Q9Y2R0 106 aaPredicted RBP15.18■□□□□ 0.02
TCOF1-206ENST00000445265 U3KQ87 197 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 IMPA2O14732 288 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 LILRB5O75023 590 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 SYNGR4O95473 234 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 LIMS1P48059 325 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 BIDP55957 195 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 THSD4Q6ZMP0 1018 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 H1FNTQ75WM6 255 aaPredicted RBP15.18■□□□□ 0.02
TCOF1-206ENST00000445265 FGGYQ96C11 551 aa15.18■□□□□ 0.02
TCOF1-206ENST00000445265 CGGBP1Q9UFW8 167 aaPredicted RBP15.18■□□□□ 0.02
TCOF1-206ENST00000445265 MRPS28Q9Y2Q9 187 aaKnown RBP15.18■□□□□ 0.02
TCOF1-206ENST00000445265 LSM2Q9Y333 95 aaKnown RBP15.18■□□□□ 0.02
TCOF1-206ENST00000445265 LSM5Q9Y4Y9 91 aaKnown RBP15.18■□□□□ 0.02
TCOF1-206ENST00000445265 ANKRD61A6NGH8 418 aa15.17■□□□□ 0.02
TCOF1-206ENST00000445265 SEC14L5O43304 696 aa15.17■□□□□ 0.02
TCOF1-206ENST00000445265 SLC6A1P30531 599 aa15.17■□□□□ 0.02
TCOF1-206ENST00000445265 RFX2P48378 723 aa15.17■□□□□ 0.02
TCOF1-206ENST00000445265 CCR5P51681 352 aa15.17■□□□□ 0.02
TCOF1-206ENST00000445265 SEMA4CQ9C0C4 833 aa15.17■□□□□ 0.02
TCOF1-206ENST00000445265 VSX1Q9NZR4 365 aaPredicted RBP15.17■□□□□ 0.02
TCOF1-206ENST00000445265 POMT2Q9UKY4 750 aa15.17■□□□□ 0.02
TCOF1-206ENST00000445265 A0A0G2JMZ2 1700 aa15.17■□□□□ 0.02
TCOF1-206ENST00000445265 LRRC37A2A6NM11 1700 aa15.17■□□□□ 0.02
TCOF1-206ENST00000445265 GGT3PA6NGU5 568 aa15.17■□□□□ 0.02
TCOF1-206ENST00000445265 TUBAL3A6NHL2 446 aa15.17■□□□□ 0.02
TCOF1-206ENST00000445265 EEF1A1P68104 462 aaKnown RBP15.17■□□□□ 0.02
TCOF1-206ENST00000445265 TAGLNQ01995 201 aaKnown RBP15.17■□□□□ 0.02
TCOF1-206ENST00000445265 PPA1Q15181 289 aa15.17■□□□□ 0.02
TCOF1-206ENST00000445265 EHFQ9NZC4 300 aa15.17■□□□□ 0.02
TCOF1-206ENST00000445265 ZNF14P17017 642 aaPredicted RBP15.17■□□□□ 0.02
TCOF1-206ENST00000445265 ZNF93P35789 620 aaPredicted RBP15.17■□□□□ 0.02
TCOF1-206ENST00000445265 LRRC69Q6ZNQ3 347 aa15.17■□□□□ 0.02
TCOF1-206ENST00000445265 BOLLQ8N9W6 283 aaKnown RBP15.17■□□□□ 0.02
TCOF1-206ENST00000445265 NRTNQ99748 197 aa15.17■□□□□ 0.02
TCOF1-206ENST00000445265 SDHAF2Q9NX18 166 aa15.17■□□□□ 0.02
TCOF1-206ENST00000445265 KLK11Q9UBX7 282 aa15.17■□□□□ 0.02
TCOF1-206ENST00000445265 PDCD11Q14690 1871 aaKnown RBP15.17■□□□□ 0.02
TCOF1-206ENST00000445265 PLA2G10O15496 165 aa15.17■□□□□ 0.02
TCOF1-206ENST00000445265 CHRM2P08172 466 aa15.17■□□□□ 0.02
TCOF1-206ENST00000445265 DCTDP32321 178 aa15.17■□□□□ 0.02
TCOF1-206ENST00000445265 KIAA0907Q7Z7F0 614 aaPredicted RBP15.17■□□□□ 0.02
TCOF1-206ENST00000445265 GABRG1Q8N1C3 465 aa15.17■□□□□ 0.02
TCOF1-206ENST00000445265 ARPC5LQ9BPX5 153 aa15.17■□□□□ 0.02
TCOF1-206ENST00000445265 MCOLN1Q9GZU1 580 aa15.17■□□□□ 0.02
TCOF1-206ENST00000445265 POFUT1Q9H488 388 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms