RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 SIRPB1O00241 398 aa7.31□□□□□ -1.24
RIF1-205ENST00000444746 IL1AP01583 271 aa7.31□□□□□ -1.24
RIF1-205ENST00000444746 HNF1AP20823 631 aa7.31□□□□□ -1.24
RIF1-205ENST00000444746 C17orf67Q0P5P2 114 aa7.31□□□□□ -1.24
RIF1-205ENST00000444746 FAM189A2Q15884 450 aa7.31□□□□□ -1.24
RIF1-205ENST00000444746 ZNF684Q5T5D7 378 aa7.31□□□□□ -1.24
RIF1-205ENST00000444746 ZNF321PQ8N8H1 164 aa7.31□□□□□ -1.24
RIF1-205ENST00000444746 OR51H1Q8NH63 302 aa7.31□□□□□ -1.24
RIF1-205ENST00000444746 AKR7LQ8NHP1 331 aa7.31□□□□□ -1.24
RIF1-205ENST00000444746 FAM3DQ96BQ1 224 aa7.31□□□□□ -1.24
RIF1-205ENST00000444746 TMEM59Q9BXS4 323 aa7.31□□□□□ -1.24
RIF1-205ENST00000444746 SLC38A1Q9H2H9 487 aa7.31□□□□□ -1.24
RIF1-205ENST00000444746 FBXL4Q9UKA2 621 aa7.31□□□□□ -1.24
RIF1-205ENST00000444746 PADI1Q9ULC6 663 aa7.31□□□□□ -1.24
RIF1-205ENST00000444746 AQP7O14520 342 aa7.31□□□□□ -1.24
RIF1-205ENST00000444746 TNFSF15O95150 251 aa7.31□□□□□ -1.24
RIF1-205ENST00000444746 PAPLNO95428 1278 aa7.31□□□□□ -1.24
RIF1-205ENST00000444746 CXCL10P02778 98 aa7.31□□□□□ -1.24
RIF1-205ENST00000444746 SRMP19623 302 aa7.31□□□□□ -1.24
RIF1-205ENST00000444746 ALDH3B1P43353 468 aa7.31□□□□□ -1.24
RIF1-205ENST00000444746 FOXF1Q12946 379 aa7.31□□□□□ -1.24
RIF1-205ENST00000444746 KIRREL2Q6UWL6 708 aa7.31□□□□□ -1.24
RIF1-205ENST00000444746 LRRC28Q86X40 367 aaPredicted RBP7.31□□□□□ -1.24
RIF1-205ENST00000444746 NTN4Q9HB63 628 aa7.31□□□□□ -1.24
RIF1-205ENST00000444746 PLCH1Q4KWH8 1693 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 TCRBP04435 133 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 SPI1P17947 270 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 ARHGAP11BQ3KRB8 267 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 DPY19L2P2Q6ZN68 376 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 USP51Q70EK9 711 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 FJX1Q86VR8 437 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 SLC46A1Q96NT5 459 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 PPA2Q9H2U2 334 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 TMEM231Q9H6L2 316 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 PTTG3PQ9NZH4 202 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 ASH2LQ9UBL3 628 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 PKD1L3Q7Z443 1732 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 TMEM82A0PJX8 343 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 PHF1O43189 567 aaPredicted RBP7.3□□□□□ -1.24
RIF1-205ENST00000444746 SCAF4O95104 1147 aaKnown RBP7.3□□□□□ -1.24
RIF1-205ENST00000444746 PATE4P0C8F1 98 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 GPLD1P80108 840 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 FAPQ12884 760 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 Q499Y3 187 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 C6orf15Q6UXA7 325 aaPredicted RBP7.3□□□□□ -1.24
RIF1-205ENST00000444746 LINC01555Q8NAE3 123 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 OR1N1Q8NGS0 311 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 FOXRED1Q96CU9 486 aaPredicted RBP7.3□□□□□ -1.24
RIF1-205ENST00000444746 POFUT1Q9H488 388 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 TMEM38AQ9H6F2 299 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 CRLF2Q9HC73 371 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 CPNE5Q9HCH3 593 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 ZNF355PQ9NSJ1 428 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 MYH8P13535 1937 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 FXYD1O00168 92 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 ASCL1P50553 236 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 RAB15P59190 212 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 KIAA1024LP59773 190 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 C3P1Q6ZMU1 363 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 C17orf107Q6ZR85 190 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 TXNDC15Q96J42 360 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 C19orf53Q9UNZ5 99 aaPredicted RBP7.3□□□□□ -1.24
RIF1-205ENST00000444746 HS3ST3A1Q9Y663 406 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 SETD1AO15047 1707 aaKnown RBP7.3□□□□□ -1.24
RIF1-205ENST00000444746 OR2T7P0C7T2 308 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 CCL2P13500 99 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 HOXB9P17482 250 aaPredicted RBP7.3□□□□□ -1.24
RIF1-205ENST00000444746 HTR3AP46098 478 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 HTR4Q13639 388 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 C20orf196Q8IYI0 205 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 OR2T27Q8NH04 317 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 NUDCD2Q8WVJ2 157 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 KTI12Q96EK9 354 aaPredicted RBP7.3□□□□□ -1.24
RIF1-205ENST00000444746 NICN1Q9BSH3 213 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 COL16A1Q07092 1604 aaPredicted RBP7.3□□□□□ -1.24
RIF1-205ENST00000444746 CTSVO60911 334 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 ZIC2O95409 532 aaPredicted RBP7.3□□□□□ -1.24
RIF1-205ENST00000444746 NSA2O95478 260 aaKnown RBP7.3□□□□□ -1.24
RIF1-205ENST00000444746 OPRM1P35372 400 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 P2RX3P56373 397 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 RPL27P61353 136 aaKnown RBP7.3□□□□□ -1.24
RIF1-205ENST00000444746 MC2RQ01718 297 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 SPEM2Q0P670 501 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 C3AR1Q16581 482 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 VASH1Q7L8A9 365 aaPredicted RBP7.3□□□□□ -1.24
RIF1-205ENST00000444746 RPS19BP1Q86WX3 136 aaKnown RBP7.3□□□□□ -1.24
RIF1-205ENST00000444746 CMTM1Q8IZ96 169 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 C17orf50Q8WW18 174 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 ADAMTS14Q8WXS8 1223 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 THRSPQ92748 146 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 HAS2Q92819 552 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 SARGQ9BW04 601 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 SLC22A11Q9NSA0 550 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 A0A1W2PPC4 97 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 EML2O95834 649 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 CD160O95971 181 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 FOLR1P15328 257 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 CDK2P24941 298 aa7.3□□□□□ -1.24
RIF1-205ENST00000444746 ZNF93P35789 620 aaPredicted RBP7.3□□□□□ -1.24
RIF1-205ENST00000444746 NKX6-1P78426 367 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms