RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 PKDREJQ9NTG1 2253 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 A0A1W2PPL8 197 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 A0A1W2PR80 420 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 SLC22A23A1A5C7 686 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 RIIAD1A6NNX1 92 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 M0R1B8 84 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 KHDRBS3O75525 346 aaKnown RBP12.35□□□□□ -0.43
SSBP3-208ENST00000444533 CTAG2O75638 210 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 SEC14L2O76054 403 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 SLC2A10O95528 541 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 RAB36O95755 333 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 BAG2O95816 211 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 THBDP07204 575 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 OSMP13725 252 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 B4GALT1P15291 398 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 ZNF26P17031 533 aaPredicted RBP12.35□□□□□ -0.43
SSBP3-208ENST00000444533 PAICSP22234 425 aaKnown RBP12.35□□□□□ -0.43
SSBP3-208ENST00000444533 PTAFRP25105 342 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 CENPAP49450 140 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 ZNF83P51522 516 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 SGCAQ16586 387 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 SLC36A2Q495M3 483 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 SLC36A3Q495N2 470 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 MESTQ5EB52 335 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 C10orf128Q5T292 105 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 SLC27A4Q6P1M0 643 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 TMEM53Q6P2H8 277 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 LEG1Q6P5S2 330 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 ZNF627Q7L945 461 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 TMEM179BQ7Z7N9 219 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 HS3ST5Q8IZT8 346 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 SLC22A24Q8N4F4 322 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 OR52E2Q8NGJ4 325 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 PLPPR2Q96GM1 343 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 PLEKHA8Q96JA3 519 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 RADILQ96JH8 1075 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 SNX18Q96RF0 628 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 NTN4Q9HB63 628 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 S100A14Q9HCY8 104 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 CCNB1IP1Q9NPC3 277 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 RASSF1Q9NS23 344 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 TMEM38BQ9NVV0 291 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 HECTD1Q9ULT8 2610 aa12.35□□□□□ -0.43
SSBP3-208ENST00000444533 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.34□□□□□ -0.43
SSBP3-208ENST00000444533 H7C1C5 153 aa12.34□□□□□ -0.43
SSBP3-208ENST00000444533 SLC16A7O60669 478 aa12.34□□□□□ -0.43
SSBP3-208ENST00000444533 PTHP01270 115 aa12.34□□□□□ -0.43
SSBP3-208ENST00000444533 HMGN1P05114 100 aa12.34□□□□□ -0.43
SSBP3-208ENST00000444533 HIST1H1CP16403 213 aaKnown RBP12.34□□□□□ -0.43
SSBP3-208ENST00000444533 ZNF3P17036 446 aa12.34□□□□□ -0.43
SSBP3-208ENST00000444533 ARR3P36575 388 aa12.34□□□□□ -0.43
SSBP3-208ENST00000444533 FXYD6P3P58550 94 aa12.34□□□□□ -0.43
SSBP3-208ENST00000444533 PCBD1P61457 104 aa12.34□□□□□ -0.43
SSBP3-208ENST00000444533 LCN6P62502 163 aa12.34□□□□□ -0.43
SSBP3-208ENST00000444533 PLP2Q04941 152 aa12.34□□□□□ -0.43
SSBP3-208ENST00000444533 GSG1Q2KHT4 349 aa12.34□□□□□ -0.43
SSBP3-208ENST00000444533 SLC35F1Q5T1Q4 408 aa12.34□□□□□ -0.43
SSBP3-208ENST00000444533 SLC16A14Q7RTX9 510 aa12.34□□□□□ -0.43
SSBP3-208ENST00000444533 LNX2Q8N448 690 aa12.34□□□□□ -0.43
SSBP3-208ENST00000444533 OR4K13Q8NH42 304 aa12.34□□□□□ -0.43
SSBP3-208ENST00000444533 ZNF837Q96EG3 531 aaPredicted RBP12.34□□□□□ -0.43
SSBP3-208ENST00000444533 RBM4BQ9BQ04 359 aaKnown RBP12.34□□□□□ -0.43
SSBP3-208ENST00000444533 RBM4Q9BWF3 364 aaKnown RBP12.34□□□□□ -0.43
SSBP3-208ENST00000444533 SYT4Q9H2B2 425 aa12.34□□□□□ -0.43
SSBP3-208ENST00000444533 NELFAQ9H3P2 528 aa12.34□□□□□ -0.43
SSBP3-208ENST00000444533 SIAEQ9HAT2 523 aa12.34□□□□□ -0.43
SSBP3-208ENST00000444533 VSX1Q9NZR4 365 aaPredicted RBP12.34□□□□□ -0.43
SSBP3-208ENST00000444533 POU2F3Q9UKI9 436 aa12.34□□□□□ -0.43
SSBP3-208ENST00000444533 OAZ3Q9UMX2 235 aa12.34□□□□□ -0.43
SSBP3-208ENST00000444533 RNF115Q9Y4L5 304 aa12.34□□□□□ -0.43
SSBP3-208ENST00000444533 SAC3D1A6NKF1 404 aa12.33□□□□□ -0.44
SSBP3-208ENST00000444533 BHLHE40O14503 412 aa12.33□□□□□ -0.44
SSBP3-208ENST00000444533 IGFBP5P24593 272 aa12.33□□□□□ -0.44
SSBP3-208ENST00000444533 ZNF133P52736 654 aaPredicted RBP12.33□□□□□ -0.44
SSBP3-208ENST00000444533 ESRRGP62508 458 aa12.33□□□□□ -0.44
SSBP3-208ENST00000444533 MRPS34P82930 218 aaKnown RBP12.33□□□□□ -0.44
SSBP3-208ENST00000444533 GLO1Q04760 184 aa12.33□□□□□ -0.44
SSBP3-208ENST00000444533 FMODQ06828 376 aa12.33□□□□□ -0.44
SSBP3-208ENST00000444533 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.33□□□□□ -0.44
SSBP3-208ENST00000444533 NPRL3Q12980 569 aa12.33□□□□□ -0.44
SSBP3-208ENST00000444533 C3orf36Q3SXR2 165 aa12.33□□□□□ -0.44
SSBP3-208ENST00000444533 FAHD1Q6P587 224 aa12.33□□□□□ -0.44
SSBP3-208ENST00000444533 SLC25A47Q6Q0C1 308 aa12.33□□□□□ -0.44
SSBP3-208ENST00000444533 GLB1L2Q8IW92 636 aa12.33□□□□□ -0.44
SSBP3-208ENST00000444533 ZNF295-AS1Q8N0V1 137 aa12.33□□□□□ -0.44
SSBP3-208ENST00000444533 PARP8Q8N3A8 854 aa12.33□□□□□ -0.44
SSBP3-208ENST00000444533 LRRC18Q8N456 261 aa12.33□□□□□ -0.44
SSBP3-208ENST00000444533 FAM169BQ8N8A8 192 aa12.33□□□□□ -0.44
SSBP3-208ENST00000444533 WDR31Q8NA23 367 aa12.33□□□□□ -0.44
SSBP3-208ENST00000444533 SDR9C7Q8NEX9 313 aa12.33□□□□□ -0.44
SSBP3-208ENST00000444533 IL17RDQ8NFM7 739 aa12.33□□□□□ -0.44
SSBP3-208ENST00000444533 OR2T4Q8NH00 348 aa12.33□□□□□ -0.44
SSBP3-208ENST00000444533 SLC38A2Q96QD8 506 aa12.33□□□□□ -0.44
SSBP3-208ENST00000444533 NMNAT3Q96T66 252 aa12.33□□□□□ -0.44
SSBP3-208ENST00000444533 PKP2Q99959 881 aa12.33□□□□□ -0.44
SSBP3-208ENST00000444533 C9orf16Q9BUW7 83 aa12.33□□□□□ -0.44
SSBP3-208ENST00000444533 C1QTNF6Q9BXI9 259 aa12.33□□□□□ -0.44
SSBP3-208ENST00000444533 POLR1DQ9Y2S0 133 aa12.33□□□□□ -0.44
SSBP3-208ENST00000444533 UTP20O75691 2785 aaKnown RBP12.33□□□□□ -0.44
SSBP3-208ENST00000444533 IQCMA0A1B0GVH7 501 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms