RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 CD53P19397 219 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 NPR2P20594 1047 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 GSTM3P21266 225 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 IST1P53990 364 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 MRPS34P82930 218 aaKnown RBP13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 CBX1P83916 185 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 MYBPC1Q00872 1141 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 GSG1Q2KHT4 349 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 ZNF620Q6ZNG0 422 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 RASSF6Q6ZTQ3 369 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 ADCK1Q86TW2 530 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 CLDN22Q8N7P3 220 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 KBTBD8Q8NFY9 601 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 OR9Q2Q8NGE9 314 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 Q96M85 177 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 SNX18Q96RF0 628 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 IL20Q9NYY1 176 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 ZNF224Q9NZL3 707 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 DNAJB9Q9UBS3 223 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 PLEKHA6Q9Y2H5 1048 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 U3KQV3 271 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 MAST4O15021 2626 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 POLQO75417 2590 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 PRSS37A4D1T9 235 aa13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 CIB2O75838 187 aa13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 SLC2A10O95528 541 aa13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 CAPZA2P47755 286 aa13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 TUBA1BP68363 451 aa13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 TUBA4AP68366 448 aa13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 COX10Q12887 443 aa13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 KRR1Q13601 381 aaKnown RBP13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 MESTQ5EB52 335 aa13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 C1orf146Q5VVC0 180 aa13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 SLC22A25Q6T423 547 aa13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 CD300LDQ6UXZ3 194 aa13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 FOXL2NBQ6ZUU3 175 aa13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 TUBA1AQ71U36 451 aa13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 MDP1Q86V88 176 aa13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 SKA3Q8IX90 412 aa13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 PIAS4Q8N2W9 510 aaPredicted RBP13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 AQP11Q8NBQ7 271 aa13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 GIPC3Q8TF64 312 aa13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 IGFBPL1Q8WX77 278 aa13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 SLCO4A1Q96BD0 722 aa13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 DUS3LQ96G46 650 aaKnown RBP13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 ZNF75AQ96N20 296 aa13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 FOXC2Q99958 501 aa13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 KCNS3Q9BQ31 491 aa13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 SIAEQ9HAT2 523 aa13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 FAIMQ9NVQ4 179 aa13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 BEX4Q9NWD9 120 aaPredicted RBP13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 CISD1Q9NZ45 108 aaKnown RBP13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 IER3IP1Q9Y5U9 82 aa13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 CDH10Q9Y6N8 788 aa13.09□□□□□ -0.31
CSNK1E-210ENST00000442216 LRBAP50851 2863 aa13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 CREBBPQ92793 2442 aa13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 TEX15Q9BXT5 2789 aa13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 TEX13CA0A0J9YWL9 993 aa13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 SLC22A23A1A5C7 686 aa13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 ZNF503-AS2A6NEH8 195 aa13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 DEAF1O75398 565 aaPredicted RBP13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 HLA-HP01893 362 aa13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 CRYAAP02489 173 aa13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 CECR9P0C854 216 aa13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 CD79AP11912 226 aa13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 GUCA1AP43080 201 aaPredicted RBP13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 CDH11P55287 796 aa13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 RAB1AP62820 205 aa13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 NAAAQ02083 359 aa13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 FMODQ06828 376 aa13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 PPP1R8Q12972 351 aaKnown RBP13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 SLC36A2Q495M3 483 aa13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 OR10G2Q8NGC3 310 aa13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 OR52L1Q8NGH7 329 aa13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 RASD2Q96D21 266 aa13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 SAMD8Q96LT4 415 aa13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 ERMAPQ96PL5 475 aaPredicted RBP13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 CCL19Q99731 98 aa13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 WACQ9BTA9 647 aa13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 GRIP2Q9C0E4 1043 aa13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 KCNN2Q9H2S1 579 aa13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 ARMC1Q9NVT9 282 aa13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 VSX1Q9NZR4 365 aaPredicted RBP13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 IL20RAQ9UHF4 553 aa13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 UGT2A1Q9Y4X1 527 aa13.08□□□□□ -0.32
CSNK1E-210ENST00000442216 IGKV1D-43A0A0B4J1Z2 117 aa13.07□□□□□ -0.32
CSNK1E-210ENST00000442216 PPP1R3DO95685 299 aa13.07□□□□□ -0.32
CSNK1E-210ENST00000442216 RAB36O95755 333 aa13.07□□□□□ -0.32
CSNK1E-210ENST00000442216 DANCRP0C864 163 aa13.07□□□□□ -0.32
CSNK1E-210ENST00000442216 ZNF14P17017 642 aaPredicted RBP13.07□□□□□ -0.32
CSNK1E-210ENST00000442216 IDH3GP51553 393 aaPredicted RBP13.07□□□□□ -0.32
CSNK1E-210ENST00000442216 ARHGDIAP52565 204 aa13.07□□□□□ -0.32
CSNK1E-210ENST00000442216 SPOCK1Q08629 439 aa13.07□□□□□ -0.32
CSNK1E-210ENST00000442216 DEFB113Q30KQ7 82 aa13.07□□□□□ -0.32
CSNK1E-210ENST00000442216 FAM27BQ5VT28 67 aa13.07□□□□□ -0.32
CSNK1E-210ENST00000442216 ZNF544Q6NX49 715 aa13.07□□□□□ -0.32
CSNK1E-210ENST00000442216 TMEM53Q6P2H8 277 aa13.07□□□□□ -0.32
CSNK1E-210ENST00000442216 SLC16A14Q7RTX9 510 aa13.07□□□□□ -0.32
CSNK1E-210ENST00000442216 OR4F15Q8NGB8 312 aa13.07□□□□□ -0.32
CSNK1E-210ENST00000442216 SMAP2Q8WU79 429 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms