RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 HIF3AQ9Y2N7 669 aa7.29□□□□□ -1.24
CCDC39-201ENST00000442201 RPL36Q9Y3U8 105 aaKnown RBP7.29□□□□□ -1.24
CCDC39-201ENST00000442201 WDFY3Q8IZQ1 3526 aa7.29□□□□□ -1.24
CCDC39-201ENST00000442201 HEATR5AQ86XA9 2040 aa7.29□□□□□ -1.24
CCDC39-201ENST00000442201 A0A087WZY1 265 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 SLC22A23A1A5C7 686 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 G3V3Y1 287 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 BLOC1S5-TXNDC5H3BN57 136 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 PPP1R3DO95685 299 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 RAF1P04049 648 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 ADRB1P08588 477 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 ASAH2BP0C7U1 165 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 TGFBR2P37173 567 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 LTBQ06643 244 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 SLC35F1Q5T1Q4 408 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 C1QL3Q5VWW1 255 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 ARHGAP11AQ6P4F7 1023 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 GALNT16Q8N428 558 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 STX19Q8N4C7 294 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 GDPD1Q8N9F7 314 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 FGF11Q92914 225 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 NTNG2Q96CW9 530 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 TMEM41AQ96HV5 264 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 JSRP1Q96MG2 331 aaPredicted RBP7.28□□□□□ -1.24
CCDC39-201ENST00000442201 SORCS2Q96PQ0 1159 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 UTP23Q9BRU9 249 aaKnown RBP7.28□□□□□ -1.24
CCDC39-201ENST00000442201 PAPOLGQ9BWT3 736 aaKnown RBP7.28□□□□□ -1.24
CCDC39-201ENST00000442201 OR11A1Q9GZK7 315 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 GPR83Q9NYM4 423 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 CNOT2Q9NZN8 540 aaKnown RBP7.28□□□□□ -1.24
CCDC39-201ENST00000442201 LRFN1Q9P244 771 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 NDRG3Q9UGV2 375 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 KIF25Q9UIL4 384 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 HSPB11Q9Y547 144 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 RIIAD1A6NNX1 92 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 PRODHO43272 600 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 ZNF208O43345 1280 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 DHFRP00374 187 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 IFNGP01579 166 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 FBP1P09467 338 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 S100PP25815 95 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 RIDAP52758 137 aaKnown RBP7.28□□□□□ -1.24
CCDC39-201ENST00000442201 SPCS3P61009 180 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 SNRPD2P62316 118 aaKnown RBP7.28□□□□□ -1.24
CCDC39-201ENST00000442201 EMX1Q04741 257 aaPredicted RBP7.28□□□□□ -1.24
CCDC39-201ENST00000442201 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.28□□□□□ -1.24
CCDC39-201ENST00000442201 EIF2S3LQ2VIR3 472 aaKnown RBP7.28□□□□□ -1.24
CCDC39-201ENST00000442201 GXYLT1Q4G148 440 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 PYHIN1Q6K0P9 492 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 DPY19L2P2Q6ZN68 376 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 BCDIN3DQ7Z5W3 292 aaKnown RBP7.28□□□□□ -1.24
CCDC39-201ENST00000442201 RFKQ969G6 155 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 SLC25A36Q96CQ1 311 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 DDIT4LQ96D03 193 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 ZNF582Q96NG8 517 aaPredicted RBP7.28□□□□□ -1.24
CCDC39-201ENST00000442201 GNRHR2Q96P88 292 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 ERMAPQ96PL5 475 aaPredicted RBP7.28□□□□□ -1.24
CCDC39-201ENST00000442201 FN3KQ9H479 309 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 CMC2Q9NRP2 79 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 H2AFY2Q9P0M6 372 aaPredicted RBP7.28□□□□□ -1.24
CCDC39-201ENST00000442201 PEX16Q9Y5Y5 336 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 SPIN1Q9Y657 262 aaPredicted RBP7.28□□□□□ -1.24
CCDC39-201ENST00000442201 PCSK5Q92824 1860 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 hCG_1807616A0A1W2PRN6 198 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 A8MXK9 166 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 MCIDASD6RGH6 385 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 NKX2-8O15522 239 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 CBR3O75828 277 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 SLC2A10O95528 541 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 BGLAPP02818 100 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 MT-ND2P03891 347 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 TFPIP10646 304 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 PTAFRP25105 342 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 DPP4P27487 766 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 ADH6P28332 368 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 NUP62P37198 522 aaPredicted RBP7.28□□□□□ -1.24
CCDC39-201ENST00000442201 CD96P40200 585 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 AQP2P41181 271 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 DNASE1L1P49184 302 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 DSCR4P56555 118 aaPredicted RBP7.28□□□□□ -1.24
CCDC39-201ENST00000442201 ST3GAL4Q11206 333 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 ALG10Q5BKT4 473 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 ELP2Q6IA86 826 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 LINC00696Q6ZRV3 163 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 OR8H3Q8N146 312 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 EIF4E3Q8N5X7 224 aaKnown RBP7.28□□□□□ -1.24
CCDC39-201ENST00000442201 ZBTB8AQ96BR9 441 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 TRMT61AQ96FX7 289 aaKnown RBP7.28□□□□□ -1.24
CCDC39-201ENST00000442201 PTDSS2Q9BVG9 487 aa7.28□□□□□ -1.24
CCDC39-201ENST00000442201 ZNF729A6NN14 1252 aaPredicted RBP7.27□□□□□ -1.25
CCDC39-201ENST00000442201 KDM4EB2RXH2 506 aaPredicted RBP7.27□□□□□ -1.25
CCDC39-201ENST00000442201 SHISA8B8ZZ34 492 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 ARPC3O15145 178 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 SELENOFO60613 162 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 F10P00742 488 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 STSP08842 583 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 RNF224P0DH78 156 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 PIPP12273 146 aaPredicted RBP7.27□□□□□ -1.25
CCDC39-201ENST00000442201 AKR1D1P51857 326 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 SRSF6Q13247 344 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms