RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 SLC22A23A1A5C7 686 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 J3QRE1 110 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 LGALS8O00214 317 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 MAGEB4O15481 346 aaPredicted RBP12.81□□□□□ -0.36
LIMD1-202ENST00000440097 PYCR1P32322 319 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 OR12D2P58182 307 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 LCN10Q6JVE6 187 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 RPTNQ6XPR3 784 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 Q6ZTK2 550 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 ESPNLQ6ZVH7 1005 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 OR10Z1Q8NGY1 313 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 OR5W2Q8NH69 310 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 OR56B4Q8NH76 319 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 ZPLD1Q8TCW7 415 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 CNN2Q99439 309 aaKnown RBP12.81□□□□□ -0.36
LIMD1-202ENST00000440097 C20orf85Q9H1P6 137 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 NRIP3Q9NQ35 241 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 GRHPRQ9UBQ7 328 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 SESN1Q9Y6P5 492 aa12.81□□□□□ -0.36
LIMD1-202ENST00000440097 IGLV3-12A0A075B6K2 115 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 A0A0B4J203 849 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 OR6C68A6NDL8 312 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 C4orf47A7E2U8 309 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 C11orf98E9PRG8 122 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 FCER2P06734 321 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 CXCL2P19875 107 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 POU3F2P20265 443 aaPredicted RBP12.8□□□□□ -0.36
LIMD1-202ENST00000440097 SLC2A5P22732 501 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 GRPRP30550 384 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 DUSP3P51452 185 aaPredicted RBP12.8□□□□□ -0.36
LIMD1-202ENST00000440097 RAG2P55895 527 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 POU4F2Q12837 409 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 TFAP2EQ6VUC0 442 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 CEACAM19Q7Z692 300 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 SNX33Q8WV41 574 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 TAAR8Q969N4 342 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 ELMOD3Q96FG2 381 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 CCNL2Q96S94 520 aaPredicted RBP12.8□□□□□ -0.36
LIMD1-202ENST00000440097 POM121CA8CG34 1229 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 D6RAR5 112 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 NDUFA2O43678 99 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 EIF4E2O60573 245 aaKnown RBP12.8□□□□□ -0.36
LIMD1-202ENST00000440097 ACVR1BP36896 505 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 MMP15P51511 669 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 ACTC1P68032 377 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 ACTA1P68133 377 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 SNTB2Q13425 540 aaKnown RBP12.8□□□□□ -0.36
LIMD1-202ENST00000440097 TP53I3Q53FA7 332 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 C1QL3Q5VWW1 255 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 RGS7BPQ6MZT1 257 aaPredicted RBP12.8□□□□□ -0.36
LIMD1-202ENST00000440097 PRSS45Q7RTY3 260 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 RFLNBQ8N5W9 214 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 LSM14AQ8ND56 463 aaKnown RBP12.8□□□□□ -0.36
LIMD1-202ENST00000440097 THAP4Q8WY91 577 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 TSSK2Q96PF2 358 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 INPP5EQ9NRR6 644 aa12.8□□□□□ -0.36
LIMD1-202ENST00000440097 MRPL15Q9P015 296 aaKnown RBP12.8□□□□□ -0.36
LIMD1-202ENST00000440097 TRABD2BA6NFA1 517 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 E9PI62 339 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 TEX46H3BTG2 121 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 H7C1C5 153 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 UBL3O95164 117 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 TFP02787 698 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 P2RX1P51575 399 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 LCN6P62502 163 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 RPS4XP62701 263 aaKnown RBP12.79□□□□□ -0.36
LIMD1-202ENST00000440097 BDH1Q02338 343 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 RPL18Q07020 188 aaKnown RBP12.79□□□□□ -0.36
LIMD1-202ENST00000440097 SFRP4Q6FHJ7 346 aaPredicted RBP12.79□□□□□ -0.36
LIMD1-202ENST00000440097 TCEAL6Q6IPX3 200 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 SSX6Q7RTT6 188 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 CPEB2Q7Z5Q1 589 aaKnown RBP12.79□□□□□ -0.36
LIMD1-202ENST00000440097 ZNF441Q8N8Z8 693 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 NPEPL1Q8NDH3 523 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 TCEAL3Q969E4 200 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 GPN3Q9UHW5 284 aaPredicted RBP12.79□□□□□ -0.36
LIMD1-202ENST00000440097 A0A1W2PQD3 144 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 PEX14O75381 377 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 KLK3P07288 261 aaPredicted RBP12.79□□□□□ -0.36
LIMD1-202ENST00000440097 CD14P08571 375 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 SNRPBP14678 240 aaKnown RBP12.79□□□□□ -0.36
LIMD1-202ENST00000440097 SPI1P17947 270 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 F8A1P23610 371 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 LTBQ06643 244 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 KLF9Q13886 244 aaPredicted RBP12.79□□□□□ -0.36
LIMD1-202ENST00000440097 FAM198BQ6UWH4 519 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 SEZ6L2Q6UXD5 910 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 OVCH2Q7RTZ1 564 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 TMEM105Q8N8V8 129 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 AGBL5Q8NDL9 886 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 C17orf47Q8NEP4 570 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 COQ8AQ8NI60 647 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 JAM3Q9BX67 310 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 ACTR6Q9GZN1 396 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 CCDC86Q9H6F5 360 aaKnown RBP12.79□□□□□ -0.36
LIMD1-202ENST00000440097 AUNIPQ9H7T9 357 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 SRA1Q9HD15 236 aaKnown RBP12.79□□□□□ -0.36
LIMD1-202ENST00000440097 KLRF1Q9NZS2 232 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 HIF3AQ9Y2N7 669 aa12.79□□□□□ -0.36
LIMD1-202ENST00000440097 KNTC1P50748 2209 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms