RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 SERINC1Q9NRX5 453 aa9.39□□□□□ -0.91
CPNE1-218ENST00000439806 MRPL22Q9NWU5 206 aaKnown RBP9.39□□□□□ -0.91
CPNE1-218ENST00000439806 OCIAD1Q9NX40 245 aa9.39□□□□□ -0.91
CPNE1-218ENST00000439806 ALKBH4Q9NXW9 302 aa9.39□□□□□ -0.91
CPNE1-218ENST00000439806 COPZ2Q9P299 210 aa9.39□□□□□ -0.91
CPNE1-218ENST00000439806 ING1Q9UK53 422 aaPredicted RBP9.39□□□□□ -0.91
CPNE1-218ENST00000439806 NXT1Q9UKK6 140 aaKnown RBP9.39□□□□□ -0.91
CPNE1-218ENST00000439806 VDAC3Q9Y277 283 aa9.39□□□□□ -0.91
CPNE1-218ENST00000439806 COA3Q9Y2R0 106 aaPredicted RBP9.39□□□□□ -0.91
CPNE1-218ENST00000439806 SEC16AO15027 2179 aa9.39□□□□□ -0.91
CPNE1-218ENST00000439806 RALGAPA1Q6GYQ0 2036 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 TRAV6A0A075B6T7 132 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 ARPC4-TTLL3A0A0A6YYG9 625 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 TRABD2BA6NFA1 517 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 C19orf67A6NJJ6 358 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 GPR171O14626 319 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 KRT33AO76009 404 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 CER1O95813 267 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 FGF5P12034 268 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 CTLA4P16410 223 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 CCR9P51686 369 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 DLX5P56178 289 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 CLDN12P56749 244 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 AP3S2P59780 193 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 TLE3Q04726 772 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 GLO1Q04760 184 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 MAB21L1Q13394 359 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 DYRK1AQ13627 763 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 NDUFA5Q16718 116 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 ODF4Q2M2E3 257 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 SLC36A2Q495M3 483 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 OTPQ5XKR4 325 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 SLC22A10Q63ZE4 541 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 TIGD3Q6B0B8 471 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 FAM199XQ6PEV8 388 aaPredicted RBP9.38□□□□□ -0.91
CPNE1-218ENST00000439806 ARSKQ6UWY0 536 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 SLC35D2Q76EJ3 337 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 PRSS45Q7RTY3 260 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 LRRTM1Q86UE6 522 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 TCTE3Q8IZS6 198 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 PRSS35Q8N3Z0 413 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 MAFAQ8NHW3 353 aaPredicted RBP9.38□□□□□ -0.91
CPNE1-218ENST00000439806 RNF128Q8TEB7 428 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 C15orf40Q8WUR7 153 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 SLC25A38Q96DW6 304 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 MRGPRX4Q96LA9 322 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 FYTTD1Q96QD9 318 aaKnown RBP9.38□□□□□ -0.91
CPNE1-218ENST00000439806 AMELYQ99218 206 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 SPSB2Q99619 263 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 CMKLR1Q99788 373 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 MESP1Q9BRJ9 268 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 POTEKPQ9BYX7 375 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 ULBP3Q9BZM4 244 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 MED28Q9H204 178 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 SLC26A1Q9H2B4 701 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 AUNIPQ9H7T9 357 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 LIN7BQ9HAP6 207 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 PLEKHA1Q9HB21 404 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 PRDM6Q9NQX0 595 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 PRMT8Q9NR22 394 aaPredicted RBP9.38□□□□□ -0.91
CPNE1-218ENST00000439806 KLHL9Q9P2J3 617 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 OR5V1Q9UGF6 321 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 CDV3Q9UKY7 258 aaKnown RBP9.38□□□□□ -0.91
CPNE1-218ENST00000439806 WIF1Q9Y5W5 379 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 REV3LO60673 3130 aa9.38□□□□□ -0.91
CPNE1-218ENST00000439806 A0A087WV48 116 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 NAP1L6A6NFF2 107 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 TMEM200CA6NKL6 621 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 MS4A18H0YCH9 400 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 H3BML4 177 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 H3BSH0 61 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 GABARAPH6UMI1 98 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 MEN1O00255 615 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 OR2J2O76002 312 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 ECDO95905 644 aaPredicted RBP9.37□□□□□ -0.91
CPNE1-218ENST00000439806 TCRBP04435 133 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 KLK3P07288 261 aaPredicted RBP9.37□□□□□ -0.91
CPNE1-218ENST00000439806 FBXO45P0C2W1 286 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 GSTT2BP0CG30 244 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 HLA-DOBP13765 273 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 IFNGR1P15260 489 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 GIFP27352 417 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 BTCP35070 178 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 GDNFP39905 211 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 MAP2K6P52564 334 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 MRPS10P82664 201 aaKnown RBP9.37□□□□□ -0.91
CPNE1-218ENST00000439806 HSF1Q00613 529 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 IFITM2Q01629 132 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 POU3F1Q03052 451 aaPredicted RBP9.37□□□□□ -0.91
CPNE1-218ENST00000439806 KLF9Q13886 244 aaPredicted RBP9.37□□□□□ -0.91
CPNE1-218ENST00000439806 ETFDHQ16134 617 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 BTBD16Q32M84 506 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 PLPPR5Q32ZL2 321 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 MS4A18Q3C1V0 323 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 SLC25A53Q5H9E4 307 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 TMEM69Q5SWH9 247 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 OR7E24Q6IFN5 339 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 LCN10Q6JVE6 187 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 TMEM53Q6P2H8 277 aa9.37□□□□□ -0.91
CPNE1-218ENST00000439806 LYPD8Q6UX82 237 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms