RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 RASSF6Q6ZTQ3 369 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 TUBA1AQ71U36 451 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 ADCK1Q86TW2 530 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 PIAS4Q8N2W9 510 aaPredicted RBP10.3□□□□□ -0.76
HSPG2-206ENST00000439717 CLDN22Q8N7P3 220 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 ZNF611Q8N823 705 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 IL17RDQ8NFM7 739 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 KBTBD8Q8NFY9 601 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 OR10G2Q8NGC3 310 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 LILRB1Q8NHL6 650 aaPredicted RBP10.3□□□□□ -0.76
HSPG2-206ENST00000439717 PIGTQ969N2 578 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 SLCO4A1Q96BD0 722 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 MBD6Q96DN6 1003 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 DUS3LQ96G46 650 aaKnown RBP10.3□□□□□ -0.76
HSPG2-206ENST00000439717 SAMD8Q96LT4 415 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 ARMC1Q9NVT9 282 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 IL20RAQ9UHF4 553 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 FBXL3Q9UKT7 428 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 IER3IP1Q9Y5U9 82 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 CDH10Q9Y6N8 788 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 NOTCH2Q04721 2471 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 CSMD2Q7Z408 3487 aa10.3□□□□□ -0.76
HSPG2-206ENST00000439717 TEX15Q9BXT5 2789 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 TEX13CA0A0J9YWL9 993 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 SLC22A23A1A5C7 686 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 PRSS37A4D1T9 235 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 TMCC2O75069 709 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 DEAF1O75398 565 aaPredicted RBP10.29□□□□□ -0.76
HSPG2-206ENST00000439717 E2F6O75461 281 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 SLC2A10O95528 541 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 PPP1R3DO95685 299 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 HLA-HP01893 362 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 CD79AP11912 226 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 CD53P19397 219 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 GUCA1AP43080 201 aaPredicted RBP10.29□□□□□ -0.76
HSPG2-206ENST00000439717 ARHGDIAP52565 204 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 IST1P53990 364 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 FMODQ06828 376 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 CCNIQ14094 377 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 SLC36A2Q495M3 483 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 SLC22A25Q6T423 547 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 CD300LDQ6UXZ3 194 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 MDP1Q86V88 176 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 SKA3Q8IX90 412 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 OR52L1Q8NGH7 329 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 GIPC3Q8TF64 312 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 FBXW5Q969U6 566 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 UTP4Q969X6 686 aaKnown RBP10.29□□□□□ -0.76
HSPG2-206ENST00000439717 ERMAPQ96PL5 475 aaPredicted RBP10.29□□□□□ -0.76
HSPG2-206ENST00000439717 SNX18Q96RF0 628 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 KCNS3Q9BQ31 491 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 IFT27Q9BW83 186 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 SIAEQ9HAT2 523 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 IL20Q9NYY1 176 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 ZNF224Q9NZL3 707 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 VSX1Q9NZR4 365 aaPredicted RBP10.29□□□□□ -0.76
HSPG2-206ENST00000439717 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.29□□□□□ -0.76
HSPG2-206ENST00000439717 PLEKHA6Q9Y2H5 1048 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 UGT2A1Q9Y4X1 527 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 CSMD1Q96PZ7 3565 aa10.29□□□□□ -0.76
HSPG2-206ENST00000439717 IGKV1D-43A0A0B4J1Z2 117 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 ZNF503-AS2A6NEH8 195 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 SOCS2O14508 198 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 RAB36O95755 333 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 CRYAAP02489 173 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 CECR9P0C854 216 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 NOS3P29474 1203 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 ERFP50548 548 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 CDH11P55287 796 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 RAB1AP62820 205 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 NAAAQ02083 359 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 SPOCK1Q08629 439 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 TMEM53Q6P2H8 277 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 FOXL2NBQ6ZUU3 175 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 SLC16A14Q7RTX9 510 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 NSMAFQ92636 917 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 GTPBP3Q969Y2 492 aaKnown RBP10.28□□□□□ -0.76
HSPG2-206ENST00000439717 RASD2Q96D21 266 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 NRBF2Q96F24 287 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 FEVQ99581 238 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 CCL19Q99731 98 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 FOXC2Q99958 501 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 SH3GL3Q99963 347 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 KCNN2Q9H2S1 579 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 EGLN3Q9H6Z9 239 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 FAIMQ9NVQ4 179 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 BEX4Q9NWD9 120 aaPredicted RBP10.28□□□□□ -0.76
HSPG2-206ENST00000439717 CISD1Q9NZ45 108 aaKnown RBP10.28□□□□□ -0.76
HSPG2-206ENST00000439717 PDP1Q9P0J1 537 aaPredicted RBP10.28□□□□□ -0.76
HSPG2-206ENST00000439717 POU2F3Q9UKI9 436 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 BAIAP2Q9UQB8 552 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 AKAP9Q99996 3911 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 ALPK2Q86TB3 2170 aa10.28□□□□□ -0.76
HSPG2-206ENST00000439717 MAST4O15021 2626 aa10.27□□□□□ -0.76
HSPG2-206ENST00000439717 ABCA4P78363 2273 aa10.27□□□□□ -0.76
HSPG2-206ENST00000439717 E7EQL1 145 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 H7C1C5 153 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 KHDRBS3O75525 346 aaKnown RBP10.27□□□□□ -0.77
HSPG2-206ENST00000439717 TIPRLO75663 272 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 FCGR1AP12314 374 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms