RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 CENPBD1B2RD01 187 aa11.5□□□□□ -0.57
LINC00399-201ENST00000439008 CD14P08571 375 aa11.5□□□□□ -0.57
LINC00399-201ENST00000439008 CD79AP11912 226 aa11.5□□□□□ -0.57
LINC00399-201ENST00000439008 ITGA2P17301 1181 aa11.5□□□□□ -0.57
LINC00399-201ENST00000439008 CAPZA2P47755 286 aa11.5□□□□□ -0.57
LINC00399-201ENST00000439008 HMGA2P52926 109 aa11.5□□□□□ -0.57
LINC00399-201ENST00000439008 BNIP1Q12981 228 aa11.5□□□□□ -0.57
LINC00399-201ENST00000439008 RAB39AQ14964 217 aa11.5□□□□□ -0.57
LINC00399-201ENST00000439008 ETFDHQ16134 617 aa11.5□□□□□ -0.57
LINC00399-201ENST00000439008 ZNF770Q6IQ21 691 aaPredicted RBP11.5□□□□□ -0.57
LINC00399-201ENST00000439008 RRM2BQ7LG56 351 aa11.5□□□□□ -0.57
LINC00399-201ENST00000439008 ADGRG5Q8IZF4 528 aa11.5□□□□□ -0.57
LINC00399-201ENST00000439008 CIARTQ8N365 385 aaPredicted RBP11.5□□□□□ -0.57
LINC00399-201ENST00000439008 ARIH2OSQ8N7S6 290 aa11.5□□□□□ -0.57
LINC00399-201ENST00000439008 NSMAFQ92636 917 aa11.5□□□□□ -0.57
LINC00399-201ENST00000439008 ASB9Q96DX5 294 aa11.5□□□□□ -0.57
LINC00399-201ENST00000439008 BTBD10Q9BSF8 475 aa11.5□□□□□ -0.57
LINC00399-201ENST00000439008 CADM1Q9BY67 442 aaKnown RBP11.5□□□□□ -0.57
LINC00399-201ENST00000439008 GDF2Q9UK05 429 aaPredicted RBP11.5□□□□□ -0.57
LINC00399-201ENST00000439008 POU2F3Q9UKI9 436 aa11.5□□□□□ -0.57
LINC00399-201ENST00000439008 TMEM5Q9Y2B1 443 aa11.5□□□□□ -0.57
LINC00399-201ENST00000439008 NIPBLQ6KC79 2804 aaeCLIP11.5□□□□□ -0.57
LINC00399-201ENST00000439008 CSPG4Q6UVK1 2322 aa11.5□□□□□ -0.57
LINC00399-201ENST00000439008 CHD3Q12873 2000 aaKnown RBP11.49□□□□□ -0.57
LINC00399-201ENST00000439008 UNC119BA6NIH7 251 aa11.49□□□□□ -0.57
LINC00399-201ENST00000439008 IGHV4-39P01824 125 aa11.49□□□□□ -0.57
LINC00399-201ENST00000439008 MMP7P09237 267 aaPredicted RBP11.49□□□□□ -0.57
LINC00399-201ENST00000439008 OR8G3PP0DMU2 310 aa11.49□□□□□ -0.57
LINC00399-201ENST00000439008 GSSP48637 474 aa11.49□□□□□ -0.57
LINC00399-201ENST00000439008 PTDSS1P48651 473 aaKnown RBP11.49□□□□□ -0.57
LINC00399-201ENST00000439008 ERFP50548 548 aa11.49□□□□□ -0.57
LINC00399-201ENST00000439008 FABP6P51161 128 aa11.49□□□□□ -0.57
LINC00399-201ENST00000439008 RAB1AP62820 205 aa11.49□□□□□ -0.57
LINC00399-201ENST00000439008 CD47Q08722 323 aa11.49□□□□□ -0.57
LINC00399-201ENST00000439008 TAF11Q15544 211 aa11.49□□□□□ -0.57
LINC00399-201ENST00000439008 GSG1Q2KHT4 349 aa11.49□□□□□ -0.57
LINC00399-201ENST00000439008 ANKDD1AQ495B1 522 aa11.49□□□□□ -0.57
LINC00399-201ENST00000439008 MTX3Q5HYI7 312 aa11.49□□□□□ -0.57
LINC00399-201ENST00000439008 OTPQ5XKR4 325 aa11.49□□□□□ -0.57
LINC00399-201ENST00000439008 PGBD2Q6P3X8 592 aa11.49□□□□□ -0.57
LINC00399-201ENST00000439008 PTCHD4Q6ZW05 846 aa11.49□□□□□ -0.57
LINC00399-201ENST00000439008 CCDC36Q8IYA8 594 aa11.49□□□□□ -0.57
LINC00399-201ENST00000439008 CDK20Q8IZL9 346 aa11.49□□□□□ -0.57
LINC00399-201ENST00000439008 PAQR4Q8N4S7 273 aaPredicted RBP11.49□□□□□ -0.57
LINC00399-201ENST00000439008 OR9Q2Q8NGE9 314 aa11.49□□□□□ -0.57
LINC00399-201ENST00000439008 MCUR1Q96AQ8 359 aa11.49□□□□□ -0.57
LINC00399-201ENST00000439008 FOXN4Q96NZ1 517 aa11.49□□□□□ -0.57
LINC00399-201ENST00000439008 GPX7Q96SL4 187 aaPredicted RBP11.49□□□□□ -0.57
LINC00399-201ENST00000439008 ALG12Q9BV10 488 aa11.49□□□□□ -0.57
LINC00399-201ENST00000439008 MUC13Q9H3R2 512 aa11.49□□□□□ -0.57
LINC00399-201ENST00000439008 NRIP3Q9NQ35 241 aa11.49□□□□□ -0.57
LINC00399-201ENST00000439008 TEX13CA0A0J9YWL9 993 aa11.48□□□□□ -0.57
LINC00399-201ENST00000439008 SLC22A23A1A5C7 686 aa11.48□□□□□ -0.57
LINC00399-201ENST00000439008 TRIM64A6NGJ6 449 aa11.48□□□□□ -0.57
LINC00399-201ENST00000439008 TRIM64BA6NI03 449 aa11.48□□□□□ -0.57
LINC00399-201ENST00000439008 GYG2O15488 501 aa11.48□□□□□ -0.57
LINC00399-201ENST00000439008 GSC2O15499 205 aa11.48□□□□□ -0.57
LINC00399-201ENST00000439008 ARHGEF9O43307 516 aa11.48□□□□□ -0.57
LINC00399-201ENST00000439008 MGRN1O60291 552 aa11.48□□□□□ -0.57
LINC00399-201ENST00000439008 NDUFB2O95178 105 aa11.48□□□□□ -0.57
LINC00399-201ENST00000439008 CRYAAP02489 173 aa11.48□□□□□ -0.57
LINC00399-201ENST00000439008 IGFBP1P08833 259 aaPredicted RBP11.48□□□□□ -0.57
LINC00399-201ENST00000439008 ZNF35P13682 527 aa11.48□□□□□ -0.57
LINC00399-201ENST00000439008 ARR3P36575 388 aa11.48□□□□□ -0.57
LINC00399-201ENST00000439008 RPL4P36578 427 aaKnown RBP11.48□□□□□ -0.57
LINC00399-201ENST00000439008 CDKN2AP42771 156 aaKnown RBP11.48□□□□□ -0.57
LINC00399-201ENST00000439008 ATP5J2P56134 94 aa11.48□□□□□ -0.57
LINC00399-201ENST00000439008 MRPS34P82930 218 aaKnown RBP11.48□□□□□ -0.57
LINC00399-201ENST00000439008 TRAP1Q12931 704 aaKnown RBP11.48□□□□□ -0.57
LINC00399-201ENST00000439008 ADIPOQQ15848 244 aa11.48□□□□□ -0.57
LINC00399-201ENST00000439008 SWI5Q1ZZU3 235 aa11.48□□□□□ -0.57
LINC00399-201ENST00000439008 C1orf94Q6P1W5 598 aa11.48□□□□□ -0.57
LINC00399-201ENST00000439008 FOXL2NBQ6ZUU3 175 aa11.48□□□□□ -0.57
LINC00399-201ENST00000439008 YTHDF3Q7Z739 585 aaKnown RBP11.48□□□□□ -0.57
LINC00399-201ENST00000439008 TMEM179BQ7Z7N9 219 aa11.48□□□□□ -0.57
LINC00399-201ENST00000439008 MUC15Q8N387 334 aa11.48□□□□□ -0.57
LINC00399-201ENST00000439008 LRRC18Q8N456 261 aa11.48□□□□□ -0.57
LINC00399-201ENST00000439008 CANT1Q8WVQ1 401 aa11.48□□□□□ -0.57
LINC00399-201ENST00000439008 FBXO17Q96EF6 278 aa11.48□□□□□ -0.57
LINC00399-201ENST00000439008 GRIP2Q9C0E4 1043 aa11.48□□□□□ -0.57
LINC00399-201ENST00000439008 MAGIXQ9H6Y5 334 aa11.48□□□□□ -0.57
LINC00399-201ENST00000439008 SMURF2Q9HAU4 748 aa11.48□□□□□ -0.57
LINC00399-201ENST00000439008 CA10Q9NS85 328 aa11.48□□□□□ -0.57
LINC00399-201ENST00000439008 IER3IP1Q9Y5U9 82 aa11.48□□□□□ -0.57
LINC00399-201ENST00000439008 TMEM129A0AVI4 362 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 DCTN6O00399 190 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 SOCS2O14508 198 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 OR10H3O60404 316 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 PPP1R3DO95685 299 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 GASTP01350 101 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 CCL2P13500 99 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 CD99P14209 185 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 CTLA4P16410 223 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 FPR3P25089 353 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 APOBEC3AP31941 199 aaPredicted RBP11.47□□□□□ -0.57
LINC00399-201ENST00000439008 THBS4P35443 961 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 SMIM11AP58511 58 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 THEM4Q5T1C6 240 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 AGAP6Q5VW22 663 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 SHEQ5VZ18 495 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms