RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 NOX4Q9NPH5 578 aa12.55□□□□□ -0.4
PTCHD3-201ENST00000438700 DLL4Q9NR61 685 aa12.55□□□□□ -0.4
PTCHD3-201ENST00000438700 FLVCR2Q9UPI3 526 aa12.55□□□□□ -0.4
PTCHD3-201ENST00000438700 PCDHGA5Q9Y5G8 931 aa12.55□□□□□ -0.4
PTCHD3-201ENST00000438700 TRAV1-2A0A0B4J238 106 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 UCHL1P09936 223 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 ASAH2BP0C7U1 165 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 OR8G3PP0DMU2 310 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 ACP1P24666 158 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 SDHAP31040 664 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 EMP2P54851 167 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 PLCXD2Q0VAA5 305 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 HSD17B12Q53GQ0 312 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 DBX2Q6ZNG2 339 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 KCTD20Q7Z5Y7 419 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 TEX19Q8NA77 164 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 LRRC75AQ8NAA5 344 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 GIMAP1Q8WWP7 306 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 METTL21AQ8WXB1 218 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 WDR89Q96FK6 387 aaPredicted RBP12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 SPSB2Q99619 263 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 TSPAN10Q9H1Z9 355 aaPredicted RBP12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 DPAGT1Q9H3H5 408 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 GRHPRQ9UBQ7 328 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 NPFFR2Q9Y5X5 522 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 KMT2EQ8IZD2 1858 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 VSTM2BA6NLU5 285 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 OR6C76A6NM76 312 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 H3BSH0 61 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 RGS11O94810 467 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 ZFPL1O95159 310 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 GPANK1O95872 356 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 ONECUT2O95948 504 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 GP1BAP07359 652 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 GSG1Q2KHT4 349 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 COL28A1Q2UY09 1125 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 MESTQ5EB52 335 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 PLA2G2CQ5R387 149 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 ZNF433Q8N7K0 673 aaPredicted RBP12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 ZNF441Q8N8Z8 693 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 ZNF671Q8TAW3 534 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 CHIAQ9BZP6 476 aa12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 MS4A7Q9GZW8 240 aaPredicted RBP12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 EXOSC3Q9NQT5 275 aaKnown RBP12.54□□□□□ -0.4
PTCHD3-201ENST00000438700 C11orf98E9PRG8 122 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 PIN1P1O15428 100 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 NUPL2O15504 423 aaKnown RBP12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 SSNA1O43805 119 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 RRASP10301 218 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 CTRB1P17538 263 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 BTN1A1Q13410 526 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 ISXQ2M1V0 245 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 HES5Q5TA89 166 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 CTRB2Q6GPI1 263 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 LUZP2Q86TE4 346 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 TOMM5Q8N4H5 51 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 OR2T35Q8NGX2 323 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 LGALS14Q8TCE9 139 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 YIPF5Q969M3 257 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 LINC00052Q96N35 136 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 TSPAN32Q96QS1 320 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 CRB3Q9BUF7 120 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 CLEC4MQ9H2X3 399 aaPredicted RBP12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 METTL17Q9H7H0 456 aaPredicted RBP12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 RDH8Q9NYR8 311 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 UBQLN2Q9UHD9 624 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 COL27A1Q8IZC6 1860 aaPredicted RBP12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 ATP6V1G2-DDX39BF2Z307 99 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 TO15178 435 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 TSPAN9O75954 239 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 HOXD4P09016 255 aaPredicted RBP12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 SRMP19623 302 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 ABCD3P28288 659 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 RNF4P78317 190 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 CCDC157Q569K6 752 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 CLLU1Q5K131 121 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 FAM69BQ5VUD6 431 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 CD276Q5ZPR3 534 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 SFRP4Q6FHJ7 346 aaPredicted RBP12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 PYHIN1Q6K0P9 492 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 FAM199XQ6PEV8 388 aaPredicted RBP12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 OR6V1Q8N148 313 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 FTMTQ8N4E7 242 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 ESX1Q8N693 406 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 APCDD1LQ8NCL9 501 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 NFAM1Q8NET5 270 aaPredicted RBP12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 RGP1Q92546 391 aaPredicted RBP12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 SLC25A36Q96CQ1 311 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 TBL1XR1Q9BZK7 514 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 SYT4Q9H2B2 425 aa12.53□□□□□ -0.4
PTCHD3-201ENST00000438700 A0A1B0GTH9 108 aa12.52□□□□□ -0.4
PTCHD3-201ENST00000438700 ANKRD61A6NGH8 418 aa12.52□□□□□ -0.4
PTCHD3-201ENST00000438700 TSPAN2O60636 221 aa12.52□□□□□ -0.4
PTCHD3-201ENST00000438700 GATBO75879 557 aaKnown RBP12.52□□□□□ -0.4
PTCHD3-201ENST00000438700 PLGP00747 810 aaPredicted RBP12.52□□□□□ -0.4
PTCHD3-201ENST00000438700 ADRB1P08588 477 aa12.52□□□□□ -0.4
PTCHD3-201ENST00000438700 ICAM2P13598 275 aa12.52□□□□□ -0.4
PTCHD3-201ENST00000438700 POU3F2P20265 443 aaPredicted RBP12.52□□□□□ -0.4
PTCHD3-201ENST00000438700 CXCR1P25024 350 aa12.52□□□□□ -0.4
PTCHD3-201ENST00000438700 HSF2Q03933 536 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms