RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 IGSF6O95976 241 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 CALB1P05937 261 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 CD5P06127 495 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 CRHP06850 196 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 TACSTD2P09758 323 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 NBEAP1P0C6P0 100 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 SLC2A1P11166 492 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 HIST1H1CP16403 213 aaKnown RBP3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 ABOP16442 354 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 GNRHRP30968 328 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 HOXD3P31249 432 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 XCR1P46094 333 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 RASSF2P50749 326 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 DNA2P51530 1060 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 CAV2P51636 162 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 CLDN6P56747 220 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 CLDN12P56749 244 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR4D2P58180 307 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR10A3P58181 314 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 SLC35B1P78383 322 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 ID2Q02363 134 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 RGS1Q08116 209 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 DYNC1I2Q13409 638 aaKnown RBP3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 ASAH1Q13510 395 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 EIF4EBP2Q13542 120 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 RBM39Q14498 530 aaKnown RBP3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 SMCO1Q147U7 214 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 UBE2V2Q15819 145 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 C3AR1Q16581 482 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 PDZD11Q5EBL8 140 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 ACER2Q5QJU3 275 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 C1orf146Q5VVC0 180 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 FRMPD2BQ6IN97 320 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 PARM1Q6UWI2 310 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 CCNI2Q6ZMN8 369 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 Q6ZSR9 355 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 RFPL4BQ6ZWI9 263 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 ZNF771Q7L3S4 317 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 HSD11B1LQ7Z5J1 315 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 RIMKLAQ8IXN7 391 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 PDIK1LQ8N165 341 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 DNAJC22Q8N4W6 341 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 TMEM35BQ8NCS4 154 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 ATP6V1C2Q8NEY4 427 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR9Q2Q8NGE9 314 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR52H1Q8NGJ2 320 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR51F2Q8NH61 342 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR2AE1Q8NHA4 323 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR5K2Q8NHB8 316 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 ITFG1Q8TB96 612 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 MRGPRDQ8TDS7 321 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 RNF138Q8WVD3 245 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 TLCD1Q96CP7 247 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 NTNG2Q96CW9 530 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 LYZL4Q96KX0 146 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 CAPNS2Q96L46 248 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 KXD1Q9BQD3 176 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 COPS4Q9BT78 406 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 MRPS26Q9BYN8 205 aaKnown RBP3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 ARMC7Q9H6L4 198 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 APOBEC3GQ9HC16 384 aaKnown RBP3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 TMBIM4Q9HC24 238 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 A4GALTQ9NPC4 353 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 NRN1Q9NPD7 142 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 IFT46Q9NQC8 304 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 CLN6Q9NWW5 311 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 TEX10Q9NXF1 929 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 SLC25A37Q9NYZ2 338 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 VAPAQ9P0L0 249 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 MDFICQ9P1T7 246 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 FBXL4Q9UKA2 621 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 UBQLN1Q9UMX0 589 aaKnown RBP3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 SNX24Q9Y343 169 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 NDUFAF1Q9Y375 327 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 EXOSC1Q9Y3B2 195 aaKnown RBP3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 WIPI2Q9Y4P8 454 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 RAI2Q9Y5P3 530 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 GMPPBQ9Y5P6 360 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 USH1CQ9Y6N9 552 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 MTUS2Q5JR59 1369 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 SYNJ2O15056 1496 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 TRAV8-7A0A075B6U6 113 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 A0A0B4J2E0 115 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 A0A1B0GU03 582 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 A0A1B0GX12 115 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 FAM231BA6NCW3 169 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 GOLGA6L9A6NEM1 432 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 A6NIZ1 184 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 ZNF233A6NK53 670 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 PP2D1A8MPX8 630 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 ANHXE9PGG2 379 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 SLC9A3R1O14745 358 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 HSD17B6O14756 317 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 TM9SF1O15321 606 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 KLRC4O43908 158 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 DPM1O60762 260 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 TOM1O60784 492 aa3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 SHOX2O60902 331 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P12-201ENST00000438594 CTSVO60911 334 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms