RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 PLRG1O43660 514 aaKnown RBP6.1□□□□□ -1.43
CSDE1-205ENST00000438362 CTSVO60911 334 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 ZNF217O75362 1048 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 MTRF1O75570 445 aaKnown RBP6.1□□□□□ -1.43
CSDE1-205ENST00000438362 RAD51DO75771 328 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 HTR3BO95264 441 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 MT-ATP6P00846 226 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 IL5P05113 134 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 FGL2Q14314 439 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 MELKQ14680 651 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 PHF19Q5T6S3 580 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 ZNF425Q6IV72 752 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 GLDNQ6ZMI3 551 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-205ENST00000438362 SGPP2Q8IWX5 399 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 GABRG1Q8N1C3 465 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 ARIH2OSQ8N7S6 290 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 NKAIN3Q8N8D7 197 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 OR4K15Q8NH41 348 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 CHAC2Q8WUX2 184 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 PTP4A1Q93096 173 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 SDHCQ99643 169 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-205ENST00000438362 SEMA4CQ9C0C4 833 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 NKX2-4Q9H2Z4 354 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 ZNF346Q9UL40 294 aaKnown RBP6.1□□□□□ -1.43
CSDE1-205ENST00000438362 NYNRINQ9P2P1 1898 aaKnown RBP6.1□□□□□ -1.43
CSDE1-205ENST00000438362 A0A087WUJ7 227 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 TMEM200CA6NKL6 621 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 RFXAPO00287 272 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 P2RY10O00398 339 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 BHLHE40O14503 412 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 ZFPL1O95159 310 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 SNAPINO95295 136 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 TSPAN15O95858 294 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 CD3DP04234 171 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 SERPINA5P05154 406 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 MYOGP15173 224 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 NAGAP17050 411 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 CTHP32929 405 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 SFTPDP35247 375 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 RPL27P61353 136 aaKnown RBP6.1□□□□□ -1.43
CSDE1-205ENST00000438362 EEF1A1P68104 462 aaKnown RBP6.1□□□□□ -1.43
CSDE1-205ENST00000438362 EGR3Q06889 387 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 SLC9A3R2Q15599 337 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 SGCBQ16585 318 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 PAPD4Q6PIY7 484 aaKnown RBP6.1□□□□□ -1.43
CSDE1-205ENST00000438362 PARM1Q6UWI2 310 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 LIX1LQ8IVB5 337 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 LINC00346Q8IVM7 164 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 DND1Q8IYX4 353 aaKnown RBP6.1□□□□□ -1.43
CSDE1-205ENST00000438362 C9orf62Q8N4C0 152 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 TEX19Q8NA77 164 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 OR4N2Q8NGD1 307 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 OR4C16Q8NGL9 310 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 MFSD8Q8NHS3 518 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 RLN3Q8WXF3 142 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 OR5B2Q96R09 309 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 OR2A5Q96R48 311 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 WFDC6Q9BQY6 131 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 NRSN2Q9GZP1 204 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 C1orf198Q9H425 327 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 HAO2Q9NYQ3 351 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 DKKL1Q9UK85 242 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 OR52A1Q9UKL2 312 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 RAB22AQ9UL26 194 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 MMACHCQ9Y4U1 282 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 HS3ST3A1Q9Y663 406 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 ATG2BQ96BY7 2078 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 MYOFQ9NZM1 2061 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 CIB4A0PJX0 185 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 SLC22A23A1A5C7 686 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 C1orf196B1AJZ1 125 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 D6RAR5 112 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 ATP6V1G2-DDX39BF2Z307 99 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 HSPA12AO43301 675 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 XRCC3O43542 346 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 STK17BO94768 372 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 PTHLHP12272 177 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 CXCL3P19876 107 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 SDHBP21912 280 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 CLDN6P56747 220 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 BTG2P78543 158 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 ZNF85Q03923 595 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 C2orf76Q3KRA6 126 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 TMEM240Q5SV17 173 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 ZNF362Q5T0B9 420 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-205ENST00000438362 KIAA0895LQ68EN5 471 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 LCN10Q6JVE6 187 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 WDR88Q6ZMY6 472 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 ZNF679Q8IYX0 411 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 SLC22A24Q8N4F4 322 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 OR52B4Q8NGK2 314 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 FNDC9Q8TBE3 224 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 TOMM40LQ969M1 308 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 ARPC5LQ9BPX5 153 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 ZNF416Q9BWM5 594 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 HRH4Q9H3N8 390 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 FKRPQ9H9S5 495 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 ZNF160Q9HCG1 818 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 SLC7A11Q9UPY5 501 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 RHBDD3Q9Y3P4 386 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms