RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 A6NHS1 94 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 ZNF99A8MXY4 864 aaPredicted RBP10.02□□□□□ -0.81
LINC00539-203ENST00000434601 PRSS44E7EML9 344 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 J3QRE1 110 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 MYL12BO14950 172 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 AHCYL1O43865 530 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 ZG16O60844 167 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 PTHP01270 115 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 IGHG1P01857 330 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 IGHA1P01876 353 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 CRYABP02511 175 aaKnown RBP10.02□□□□□ -0.81
LINC00539-203ENST00000434601 MRPL3P09001 348 aaKnown RBP10.02□□□□□ -0.81
LINC00539-203ENST00000434601 SBK2P0C263 348 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 ACTC1P68032 377 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 ACTA1P68133 377 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 SRYQ05066 204 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 GTF3C1Q12789 2109 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 RAB39AQ14964 217 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 LINC01590Q5TEZ4 76 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 UBE2UQ5VVX9 321 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 VASNQ6EMK4 673 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 DNM1P34Q6PK57 102 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 CREB3L2Q70SY1 520 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 ZNF367Q7RTV3 350 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 GPR141Q7Z602 305 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 FJX1Q86VR8 437 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 OR51L1Q8NGJ5 315 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 OR6X1Q8NH79 312 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 ZNRF4Q8WWF5 429 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 TXNDC15Q96J42 360 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 ADAD1Q96M93 576 aaKnown RBP10.02□□□□□ -0.81
LINC00539-203ENST00000434601 TSSK2Q96PF2 358 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 EMC6Q9BV81 110 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 MND1Q9BWT6 205 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 RACGAP1Q9H0H5 632 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 TSPAN10Q9H1Z9 355 aaPredicted RBP10.02□□□□□ -0.81
LINC00539-203ENST00000434601 CHCHD3Q9NX63 227 aaKnown RBP10.02□□□□□ -0.81
LINC00539-203ENST00000434601 PAQR5Q9NXK6 330 aaPredicted RBP10.02□□□□□ -0.81
LINC00539-203ENST00000434601 ERGIC3Q9Y282 383 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 MED12Q93074 2177 aa10.02□□□□□ -0.81
LINC00539-203ENST00000434601 SMIM31A0A1B0GVY4 71 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 TMEM129A0AVI4 362 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 SLC35F4A4IF30 521 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 ZNF726A6NNF4 738 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 ZNF716A6NP11 495 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 DCTN6O00399 190 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 AQP7O14520 342 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 AKAP8O43823 692 aaKnown RBP10.01□□□□□ -0.81
LINC00539-203ENST00000434601 CYTIPO60759 359 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 INMTO95050 263 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 SYNGR4O95473 234 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 LCKP06239 509 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 PGA4P0DJD7 388 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 PGA3P0DJD8 388 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 CTLA4P16410 223 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 PSMB9P28065 219 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 CRABP1P29762 137 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 TTKP33981 857 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 GP2P55259 537 aaKnown RBP10.01□□□□□ -0.81
LINC00539-203ENST00000434601 CLDN17P56750 224 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 CLRN1P58418 232 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 RBPJQ06330 500 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 SLC17A1Q14916 467 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 C3AR1Q16581 482 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 ZNF324BQ6AW86 544 aaPredicted RBP10.01□□□□□ -0.81
LINC00539-203ENST00000434601 FCRLAQ7L513 359 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 ZBTB46Q86UZ6 589 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 SIAH3Q8IW03 269 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 WDFY1Q8IWB7 410 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 OR6V1Q8N148 313 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 ACBD7Q8N6N7 88 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 SYT14Q8NB59 555 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 OR13F1Q8NGS4 319 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 ROBO4Q8WZ75 1007 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 TMIGD2Q96BF3 282 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 SLC25A44Q96H78 314 aaPredicted RBP10.01□□□□□ -0.81
LINC00539-203ENST00000434601 TAAR6Q96RI8 345 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 FAM192AQ9GZU8 254 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 NUAK2Q9H093 628 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 RERGLQ9H628 205 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 SRA1Q9HD15 236 aaKnown RBP10.01□□□□□ -0.81
LINC00539-203ENST00000434601 INPP5EQ9NRR6 644 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 NDUFA13Q9P0J0 144 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 CLEC2DQ9UHP7 191 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 MCTS1Q9ULC4 181 aaKnown RBP10.01□□□□□ -0.81
LINC00539-203ENST00000434601 B9D1Q9UPM9 204 aa10.01□□□□□ -0.81
LINC00539-203ENST00000434601 KLF2Q9Y5W3 355 aaPredicted RBP10.01□□□□□ -0.81
LINC00539-203ENST00000434601 IGLV1-36A0A0B4J1U3 117 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 A0A1B0GVC2 190 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 C12orf71A8MTZ7 269 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 FAM171A2A8MVW0 826 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 CENPBD1B2RD01 187 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 SELENOFO60613 162 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 SLC16A7O60669 478 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 SEC14L2O76054 403 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 TFP02787 698 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 NR2C1P13056 603 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 CPN1P15169 458 aa10□□□□□ -0.81
LINC00539-203ENST00000434601 NAA10P41227 235 aaPredicted RBP10□□□□□ -0.81
LINC00539-203ENST00000434601 CENPAP49450 140 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms