RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 ZNF84P51523 738 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 IDH3GP51553 393 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 SMIM11AP58511 58 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 RAB1AP62820 205 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 CD47Q08722 323 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 DBPQ10586 325 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 TRAP1Q12931 704 aaKnown RBP5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 BNIP1Q12981 228 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 DGCR6Q14129 220 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 RAB39AQ14964 217 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 ETFDHQ16134 617 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 GSG1Q2KHT4 349 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 ZNF672Q499Z4 452 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 DNAL1Q4LDG9 190 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 FAM98BQ52LJ0 330 aaKnown RBP5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 ARMC4Q5T2S8 1044 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 OTPQ5XKR4 325 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 LCN8Q6JVE9 175 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 PGM2L1Q6PCE3 622 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 VHLLQ6RSH7 139 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 PIWIL3Q7Z3Z3 882 aaKnown RBP5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 ZER1Q7Z7L7 766 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 MYPOPQ86VE0 399 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 SPATA24Q86W54 205 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 C17orf78Q8N4C9 275 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 SLC22A24Q8N4F4 322 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 ZNF611Q8N823 705 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 C1orf162Q8NEQ5 155 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 FGFBP3Q8TAT2 258 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 GNPDA2Q8TDQ7 276 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 TMEM171Q8WVE6 324 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 CANT1Q8WVQ1 401 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 ASB10Q8WXI3 467 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 NINJ1Q92982 152 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 PIGTQ969N2 578 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 FBXW5Q969U6 566 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 ASB9Q96DX5 294 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 PERPQ96FX8 193 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 RSRC1Q96IZ7 334 aaKnown RBP5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 Q96M85 177 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 FANCD2OSQ96PS1 177 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 SLC38A2Q96QD8 506 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 GPA33Q99795 319 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 FOXC2Q99958 501 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 KCNS3Q9BQ31 491 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 TMEM204Q9BSN7 226 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 KATNB1Q9BVA0 655 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 CHID1Q9BWS9 393 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 CADM1Q9BY67 442 aaKnown RBP5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 MRPL13Q9BYD1 178 aaKnown RBP5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 ANKRD19PQ9H560 264 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 SIGLEC7Q9Y286 467 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 TMEM5Q9Y2B1 443 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 ADAM18Q9Y3Q7 739 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 IER3IP1Q9Y5U9 82 aa5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 MAGED1Q9Y5V3 778 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P24-201ENST00000433260 hCG_2014768A0A024R1R8 64 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 ARPC4-TTLL3A0A0A6YYG9 625 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 TEX13CA0A0J9YWL9 993 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 IMPA2O14732 288 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 KRT36O76013 467 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 CCNB2O95067 398 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 FARS2O95363 451 aaKnown RBP5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 PPP1R3DO95685 299 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 CST1P01037 141 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 CD8AP01732 235 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 CRYAAP02489 173 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 CD14P08571 375 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 IGFBP1P08833 259 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 CECR9P0C854 216 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 DANCRP0C864 163 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 OR8G3PP0DMU2 310 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 RAP2AP10114 183 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 CCNOP22674 350 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 CALCRP30988 508 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 LIMS1P48059 325 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 CDH11P55287 796 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 SH3BGRP55822 239 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 FXYD6P3P58550 94 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 RPS4XP62701 263 aaKnown RBP5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 ADAM8P78325 824 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 FLOT2Q14254 428 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 TAF11Q15544 211 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 HIST3H3Q16695 136 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 PGGHGQ32M88 737 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 RFX4Q33E94 735 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 ANKDD1AQ495B1 522 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 MTX3Q5HYI7 312 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 THEM4Q5T1C6 240 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 OR2T5Q6IEZ7 315 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 KRT80Q6KB66 452 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 C1orf94Q6P1W5 598 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 PGBD2Q6P3X8 592 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 SLC25A47Q6Q0C1 308 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 B3GLCTQ6Y288 498 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 SSX8Q7RTT4 187 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 SLC16A14Q7RTX9 510 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 REC114Q7Z4M0 266 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 TMEM179BQ7Z7N9 219 aa5.01□□□□□ -1.61
HMGB3P24-201ENST00000433260 LURAP1LQ8IV03 231 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms