RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 TAS2R41P59536 307 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 CR1LQ2VPA4 569 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 IQCCQ4KMZ1 466 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 PIWIL3Q7Z3Z3 882 aaKnown RBP10.09□□□□□ -0.79
HDAC4-202ENST00000430200 TREML1Q86YW5 311 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 MICU2Q8IYU8 434 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 ZNF101Q8IZC7 436 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 LRRC75AQ8NAA5 344 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 CPEB3Q8NE35 698 aaKnown RBP10.09□□□□□ -0.79
HDAC4-202ENST00000430200 SLC30A7Q8NEW0 376 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 SLC26A7Q8TE54 656 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 UBASH3BQ8TF42 649 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 TMEM239Q8WW34 195 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 BEX2Q9BXY8 128 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 RAB1BQ9H0U4 201 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 RHCGQ9UBD6 479 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 KCNS2Q9ULS6 477 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 WNK2Q9Y3S1 2297 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 DYSFO75923 2080 aa10.08□□□□□ -0.8
HDAC4-202ENST00000430200 BBIP1A8MTZ0 92 aa10.08□□□□□ -0.8
HDAC4-202ENST00000430200 FAM157AC9JC47 383 aa10.08□□□□□ -0.8
HDAC4-202ENST00000430200 TGFAP01135 160 aa10.08□□□□□ -0.8
HDAC4-202ENST00000430200 IGHG1P01857 330 aa10.08□□□□□ -0.8
HDAC4-202ENST00000430200 OR8G3PP0DMU2 310 aa10.08□□□□□ -0.8
HDAC4-202ENST00000430200 COL8A2P25067 703 aa10.08□□□□□ -0.8
HDAC4-202ENST00000430200 KDELR2P33947 212 aa10.08□□□□□ -0.8
HDAC4-202ENST00000430200 WNT5AP41221 380 aa10.08□□□□□ -0.8
HDAC4-202ENST00000430200 RBM34P42696 430 aaKnown RBP10.08□□□□□ -0.8
HDAC4-202ENST00000430200 YAP1P46937 504 aaKnown RBP10.08□□□□□ -0.8
HDAC4-202ENST00000430200 CDH15P55291 814 aa10.08□□□□□ -0.8
HDAC4-202ENST00000430200 CLRN1P58418 232 aa10.08□□□□□ -0.8
HDAC4-202ENST00000430200 GLO1Q04760 184 aa10.08□□□□□ -0.8
HDAC4-202ENST00000430200 TOP3AQ13472 1001 aaPredicted RBP10.08□□□□□ -0.8
HDAC4-202ENST00000430200 CYLC2Q14093 348 aaPredicted RBP10.08□□□□□ -0.8
HDAC4-202ENST00000430200 LAPTM4AQ15012 233 aa10.08□□□□□ -0.8
HDAC4-202ENST00000430200 C10orf128Q5T292 105 aa10.08□□□□□ -0.8
HDAC4-202ENST00000430200 C8orf82Q6P1X6 216 aaPredicted RBP10.08□□□□□ -0.8
HDAC4-202ENST00000430200 RFPL4BQ6ZWI9 263 aa10.08□□□□□ -0.8
HDAC4-202ENST00000430200 LRRC18Q8N456 261 aa10.08□□□□□ -0.8
HDAC4-202ENST00000430200 IL17RDQ8NFM7 739 aa10.08□□□□□ -0.8
HDAC4-202ENST00000430200 CLDND2Q8NHS1 167 aa10.08□□□□□ -0.8
HDAC4-202ENST00000430200 NEU4Q8WWR8 484 aaPredicted RBP10.08□□□□□ -0.8
HDAC4-202ENST00000430200 LIPHQ8WWY8 451 aa10.08□□□□□ -0.8
HDAC4-202ENST00000430200 SGTBQ96EQ0 304 aa10.08□□□□□ -0.8
HDAC4-202ENST00000430200 C1orf159Q96HA4 380 aa10.08□□□□□ -0.8
HDAC4-202ENST00000430200 ECSITQ9BQ95 431 aa10.08□□□□□ -0.8
HDAC4-202ENST00000430200 SHARPINQ9H0F6 387 aa10.08□□□□□ -0.8
HDAC4-202ENST00000430200 RACGAP1Q9H0H5 632 aa10.08□□□□□ -0.8
HDAC4-202ENST00000430200 REV1Q9UBZ9 1251 aa10.08□□□□□ -0.8
HDAC4-202ENST00000430200 SLC7A8Q9UHI5 535 aa10.08□□□□□ -0.8
HDAC4-202ENST00000430200 HIF3AQ9Y2N7 669 aa10.08□□□□□ -0.8
HDAC4-202ENST00000430200 CACNG2Q9Y698 323 aa10.08□□□□□ -0.8
HDAC4-202ENST00000430200 IGLV3-9A0A075B6K5 115 aa10.07□□□□□ -0.8
HDAC4-202ENST00000430200 LOC100509620A0A075B734 347 aa10.07□□□□□ -0.8
HDAC4-202ENST00000430200 TRAV27A0A087WT01 109 aa10.07□□□□□ -0.8
HDAC4-202ENST00000430200 H7C1C5 153 aa10.07□□□□□ -0.8
HDAC4-202ENST00000430200 BCL10O95999 233 aa10.07□□□□□ -0.8
HDAC4-202ENST00000430200 SCG5P05408 212 aa10.07□□□□□ -0.8
HDAC4-202ENST00000430200 TROVE2P10155 538 aaKnown RBP eCLIP10.07□□□□□ -0.8
HDAC4-202ENST00000430200 ACADSP16219 412 aa10.07□□□□□ -0.8
HDAC4-202ENST00000430200 SRD5A1P18405 259 aa10.07□□□□□ -0.8
HDAC4-202ENST00000430200 EVX1P49640 407 aa10.07□□□□□ -0.8
HDAC4-202ENST00000430200 LCN6P62502 163 aa10.07□□□□□ -0.8
HDAC4-202ENST00000430200 DBPQ10586 325 aaPredicted RBP10.07□□□□□ -0.8
HDAC4-202ENST00000430200 SPRNQ5BIV9 151 aa10.07□□□□□ -0.8
HDAC4-202ENST00000430200 OTPQ5XKR4 325 aa10.07□□□□□ -0.8
HDAC4-202ENST00000430200 SLC15A3Q8IY34 581 aa10.07□□□□□ -0.8
HDAC4-202ENST00000430200 OR2T12Q8NG77 320 aa10.07□□□□□ -0.8
HDAC4-202ENST00000430200 OR13C2Q8NGS9 318 aa10.07□□□□□ -0.8
HDAC4-202ENST00000430200 ZNF519Q8TB69 540 aa10.07□□□□□ -0.8
HDAC4-202ENST00000430200 TPD52L3Q96J77 140 aa10.07□□□□□ -0.8
HDAC4-202ENST00000430200 PRRC1Q96M27 445 aa10.07□□□□□ -0.8
HDAC4-202ENST00000430200 CCDC134Q9H6E4 229 aa10.07□□□□□ -0.8
HDAC4-202ENST00000430200 INIPQ9NRY2 104 aa10.07□□□□□ -0.8
HDAC4-202ENST00000430200 ZNF275Q9NSD4 429 aaPredicted RBP10.07□□□□□ -0.8
HDAC4-202ENST00000430200 ARGLU1Q9NWB6 273 aaPredicted RBP10.07□□□□□ -0.8
HDAC4-202ENST00000430200 DUSP13Q9UII6 198 aa10.07□□□□□ -0.8
HDAC4-202ENST00000430200 BAG5Q9UL15 447 aa10.07□□□□□ -0.8
HDAC4-202ENST00000430200 CAPN7Q9Y6W3 813 aa10.07□□□□□ -0.8
HDAC4-202ENST00000430200 A0A1W2PPW3 197 aa10.06□□□□□ -0.8
HDAC4-202ENST00000430200 MCIDASD6RGH6 385 aa10.06□□□□□ -0.8
HDAC4-202ENST00000430200 CDC42EP2O14613 210 aa10.06□□□□□ -0.8
HDAC4-202ENST00000430200 IMPA2O14732 288 aa10.06□□□□□ -0.8
HDAC4-202ENST00000430200 SNAP29O95721 258 aa10.06□□□□□ -0.8
HDAC4-202ENST00000430200 IGF2P01344 180 aa10.06□□□□□ -0.8
HDAC4-202ENST00000430200 IGHMP01871 453 aa10.06□□□□□ -0.8
HDAC4-202ENST00000430200 IFI30P13284 250 aa10.06□□□□□ -0.8
HDAC4-202ENST00000430200 ZNF250P15622 560 aa10.06□□□□□ -0.8
HDAC4-202ENST00000430200 ZNF32P17041 273 aa10.06□□□□□ -0.8
HDAC4-202ENST00000430200 MPV17P39210 176 aa10.06□□□□□ -0.8
HDAC4-202ENST00000430200 GPR4P46093 362 aa10.06□□□□□ -0.8
HDAC4-202ENST00000430200 CHN2P52757 468 aa10.06□□□□□ -0.8
HDAC4-202ENST00000430200 ERVK-25P63136 954 aa10.06□□□□□ -0.8
HDAC4-202ENST00000430200 MMEL1Q495T6 779 aa10.06□□□□□ -0.8
HDAC4-202ENST00000430200 PABPC1L2AQ5JQF8 200 aa10.06□□□□□ -0.8
HDAC4-202ENST00000430200 SPATA46Q5T0L3 261 aa10.06□□□□□ -0.8
HDAC4-202ENST00000430200 GKAP1Q5VSY0 366 aaPredicted RBP10.06□□□□□ -0.8
HDAC4-202ENST00000430200 ERICH5Q6P6B1 374 aa10.06□□□□□ -0.8
HDAC4-202ENST00000430200 SLC25A47Q6Q0C1 308 aa10.06□□□□□ -0.8
HDAC4-202ENST00000430200 SLC16A14Q7RTX9 510 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms