RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 MAP2K6P52564 334 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 EMP3P54852 163 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 RAC1P63000 192 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 ABHD17CQ6PCB6 329 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 GCNT2Q8N0V5 402 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 PATE1Q8WXA2 126 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 CRLF2Q9HC73 371 aa14.16□□□□□ -0.14
PTPRF-206ENST00000429895 ADPRHP54922 357 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 PPIAP62937 165 aaKnown RBP14.15□□□□□ -0.14
PTPRF-206ENST00000429895 SPRED3Q2MJR0 410 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 FAM199XQ6PEV8 388 aaPredicted RBP14.15□□□□□ -0.14
PTPRF-206ENST00000429895 LILRA2Q8N149 483 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 SLC16A11Q8NCK7 471 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 FAM212BQ9NTI7 297 aaPredicted RBP14.15□□□□□ -0.14
PTPRF-206ENST00000429895 SGCEO43556 437 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 APOA2P02652 100 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 NAGAP17050 411 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 TRILQ7L0X0 811 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 SEMA6DQ8NFY4 1073 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 OR52I1Q8NGK6 324 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 NANPQ8TBE9 248 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 NTNG1Q9Y2I2 539 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 TRGV8A0A0C4DH27 118 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 LRIT2A6NDA9 550 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 TMEM202A6NGA9 273 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 MAGEB1P43366 347 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 ELLP55199 621 aaPredicted RBP14.15□□□□□ -0.14
PTPRF-206ENST00000429895 GRB2P62993 217 aaKnown RBP14.15□□□□□ -0.14
PTPRF-206ENST00000429895 MFSD12Q6NUT3 480 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 ANKRD16Q6P6B7 361 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 CD300LGQ6UXG3 332 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.15□□□□□ -0.14
PTPRF-206ENST00000429895 OR10X1Q8NGY0 326 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 RTL8AQ9BWD3 113 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 NUP188Q5SRE5 1749 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 A0A096LPE4 126 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 A0A1W2PPZ6 126 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 ALPLP05186 524 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 PFN3P60673 137 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 PLK5Q496M5 336 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 NKAIN1Q4KMZ8 207 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 ANGPTL5Q86XS5 388 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 OR10K1Q8NGX5 313 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 KIR3DX1Q9H7L2 352 aa14.15□□□□□ -0.14
PTPRF-206ENST00000429895 RFC3P40938 356 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 TEKQ02763 1124 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 ALKBH6Q3KRA9 238 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 OR2B11Q5JQS5 317 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 H2BFWTQ7Z2G1 175 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 FAM3DQ96BQ1 224 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 NIPSNAP1Q9BPW8 284 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 CORINQ9Y5Q5 1042 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 GCAP28676 217 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 TRIM23P36406 574 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 NHSL2Q5HYW2 709 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 MAML2Q8IZL2 1156 aaPredicted RBP14.14□□□□□ -0.15
PTPRF-206ENST00000429895 OR10J5Q8NHC4 309 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 TERB2Q8NHR7 220 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 SLC35A4Q96G79 324 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 C20orf27Q9GZN8 174 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 PPP1R3CQ9UQK1 317 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 GPR55Q9Y2T6 319 aaPredicted RBP14.14□□□□□ -0.15
PTPRF-206ENST00000429895 MYH10P35580 1976 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 TRMT12Q53H54 448 aaKnown RBP14.14□□□□□ -0.15
PTPRF-206ENST00000429895 TDHQ8IZJ6 230 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 TBC1D29Q9UFV1 150 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 A0A0D9SG52 128 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 SIRPB1O00241 398 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 ZNF718Q3SXZ3 478 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 VWA2Q5GFL6 755 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 STEAP1BQ6NZ63 245 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 RFPL4BQ6ZWI9 263 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 BPIFCQ8NFQ6 507 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 FGF22Q9HCT0 170 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 SAGE1Q9NXZ1 904 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 SNX11Q9Y5W9 270 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 MYH1P12882 1939 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 ZC3H12DA2A288 527 aaKnown RBP14.14□□□□□ -0.15
PTPRF-206ENST00000429895 PPP3CBP16298 524 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 HTR1FP30939 366 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 SLC30A7Q8NEW0 376 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 KIRREL1Q96J84 757 aa14.14□□□□□ -0.15
PTPRF-206ENST00000429895 IGHV3-15A0A0B4J1V0 119 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 PAPLNO95428 1278 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 CR2P20023 1033 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 TRHRP34981 398 aaPredicted RBP14.13□□□□□ -0.15
PTPRF-206ENST00000429895 CCR6P51684 374 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 HCCSP53701 268 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 HSD17B11Q8NBQ5 300 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 NEURL3Q96EH8 262 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 Q96M85 177 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 NPFFR2Q9Y5X5 522 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 TNFSF15O95150 251 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 FAM157BP0CG42 384 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 RAB5CP51148 216 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 RAP2BP61225 183 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 MPPED2Q15777 294 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 BAGE3Q86Y29 109 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 BAGE2Q86Y30 109 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 UBTD2Q8WUN7 234 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms