RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 FA2HQ7L5A8 372 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 PRSS35Q8N3Z0 413 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 BPIFCQ8NFQ6 507 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 OR5B3Q8NH48 314 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 GPR119Q8TDV5 335 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 KTI12Q96EK9 354 aaPredicted RBP6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 FAM210BQ96KR6 192 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 B3GNT4Q9C0J1 378 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 NDOR1Q9UHB4 597 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 HMX2A2RU54 273 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 UPK3BL1B0FP48 263 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 UPK3BL2E5RIL1 263 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 EPHX1P07099 455 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 ZNF20P17024 532 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 TNFRSF1BP20333 461 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 DRD5P21918 477 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 SHMT2P34897 504 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 PTGFRP43088 359 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 HSD17B7P56937 341 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 PSAPL1Q6NUJ1 521 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 TPRG1Q6ZUI0 275 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 RBM23Q86U06 439 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 NPAS4Q8IUM7 802 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 ACVR1CQ8NER5 493 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 OR9A1PQ8NGU1 263 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 LRIG1Q96JA1 1093 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 NMES1Q9C002 83 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 OR51I2Q9H344 312 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 RAB9BQ9NP90 201 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 MRPS23Q9Y3D9 190 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 HEBP2Q9Y5Z4 205 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 M0R082 166 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 XRCC3O43542 346 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 OR10J4P0C629 311 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 OPRD1P41143 372 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 TNFSF10P50591 281 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 MPEG1Q2M385 716 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 TRNP1Q6NT89 227 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 SUSD1Q6UWL2 747 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 CHST4Q8NCG5 386 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 TIMM29Q9BSF4 260 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 HRH4Q9H3N8 390 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 IGKV6-21A0A0C4DH24 114 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 A0A0G2JN53 185 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 MBPP02686 304 aaPredicted RBP6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 STAG3L3P0CL85 134 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 OR12D1P0DN82 309 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 ARNTP27540 789 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 OR13C8Q8NGS7 320 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 IGSF8Q969P0 613 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 LRIT1Q9P2V4 623 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 A0A0G2JMZ2 1700 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 LRRC37A2A6NM11 1700 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 TMEM88BA6NKF7 163 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 OR2A4O95047 310 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 GNRH1P01148 92 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 EDN1P05305 212 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 SCGB2A2Q13296 93 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 SYT14P1Q58G82 188 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 FAM86B1Q8N7N1 296 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 OR2A7Q96R45 310 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 WDR83Q9BRX9 315 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 OR51I1Q9H343 314 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 PADI1Q9ULC6 663 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 DHDHQ9UQ10 334 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 GLAP06280 429 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 RNF151Q2KHN1 245 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 PKDCCQ504Y2 493 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 CLDN16Q9Y5I7 305 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 V9GYH0 126 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 WDR90Q96KV7 1748 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 LDB2O43679 373 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 ZNF354AO60765 605 aaPredicted RBP6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 PRSS56P0CW18 603 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 PMCHP20382 165 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 SSTR4P31391 388 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 THBS4P35443 961 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 CDKN1CP49918 316 aaPredicted RBP6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 ZNF74Q16587 644 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 DEFB115Q30KQ5 88 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 CYB5D2Q8WUJ1 264 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 OIT3Q8WWZ8 545 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 RAB18Q9NP72 206 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 PLXNA2O75051 1894 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 H2AFB1P0C5Y9 115 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 PGAM2P15259 253 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 ZNF133P52736 654 aaPredicted RBP6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 C18orf21Q32NC0 220 aaPredicted RBP6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 CARD16Q5EG05 197 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 CFAP161Q6P656 301 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 ZDHHC11Q9H8X9 412 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 RNF122Q9H9V4 155 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 MOKQ9UQ07 419 aa6.95□□□□□ -1.3
SYNPO2-202ENST00000429713 A0A0U1RQF3 1178 aa6.94□□□□□ -1.3
SYNPO2-202ENST00000429713 ZNF593O00488 134 aaPredicted RBP6.94□□□□□ -1.3
SYNPO2-202ENST00000429713 B3GALT2O43825 422 aa6.94□□□□□ -1.3
SYNPO2-202ENST00000429713 MMP11P24347 488 aa6.94□□□□□ -1.3
SYNPO2-202ENST00000429713 ARFRP1Q13795 201 aa6.94□□□□□ -1.3
SYNPO2-202ENST00000429713 ATXN7L3Q14CW9 347 aaPredicted RBP6.94□□□□□ -1.3
SYNPO2-202ENST00000429713 HLA-BQ31612 363 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms