RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 A6NCN8 305 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 TMEM150CB9EJG8 249 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 PTP4A3O75365 173 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 PPP3CBP16298 524 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 CTRB1P17538 263 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 SLC2A5P22732 501 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 VAMP1P23763 118 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 DIO1P49895 249 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 LUMP51884 338 aaPredicted RBP13.56□□□□□ -0.24
CACTIN-203ENST00000429344 CTRB2Q6GPI1 263 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 LRFN4Q6PJG9 635 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 OR2AK2Q8NG84 335 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 HAVCR2Q8TDQ0 301 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 ZNF764Q96H86 408 aaPredicted RBP13.56□□□□□ -0.24
CACTIN-203ENST00000429344 COMMD4Q9H0A8 199 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 COMMD9Q9P000 198 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 MPDZO75970 2070 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 ANKRD20A5PA0PJZ0 165 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 NAP1L6A6NFF2 107 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 TRIM77I1YAP6 450 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 OR6A2O95222 327 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 ADRA2CP18825 462 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 RBMS2Q15434 407 aaKnown RBP13.56□□□□□ -0.24
CACTIN-203ENST00000429344 ZNF626Q68DY1 528 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 JAGN1Q8N5M9 183 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 OR4C3Q8NH37 302 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 RGP1Q92546 391 aaPredicted RBP13.56□□□□□ -0.24
CACTIN-203ENST00000429344 LRRC46Q96FV0 321 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 DMRTA2Q96SC8 542 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 SLC39A1Q9NY26 324 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 OPN4Q9UHM6 478 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 DTX4Q9Y2E6 619 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 NDUFB6O95139 128 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 FOSL2P15408 326 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 ZNF28P17035 718 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 CDKN2AP42771 156 aaKnown RBP13.56□□□□□ -0.24
CACTIN-203ENST00000429344 POU3F4P49335 361 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 PRAMEF17Q5VTA0 474 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 SLC6A19Q695T7 634 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 FAM219AQ8IW50 185 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 POMGNT2Q8NAT1 580 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 CHST4Q8NCG5 386 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 FAM174AQ8TBP5 190 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 MLXQ9UH92 298 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 KIF25Q9UIL4 384 aa13.56□□□□□ -0.24
CACTIN-203ENST00000429344 MFSD2BA6NFX1 497 aa13.55□□□□□ -0.24
CACTIN-203ENST00000429344 TACSTD2P09758 323 aa13.55□□□□□ -0.24
CACTIN-203ENST00000429344 CD53P19397 219 aa13.55□□□□□ -0.24
CACTIN-203ENST00000429344 RAB38P57729 211 aa13.55□□□□□ -0.24
CACTIN-203ENST00000429344 UBE2IP63279 158 aaKnown RBP13.55□□□□□ -0.24
CACTIN-203ENST00000429344 MC2RQ01718 297 aa13.55□□□□□ -0.24
CACTIN-203ENST00000429344 BIKQ13323 160 aa13.55□□□□□ -0.24
CACTIN-203ENST00000429344 Q499Y3 187 aa13.55□□□□□ -0.24
CACTIN-203ENST00000429344 COL13A1Q5TAT6 717 aaPredicted RBP13.55□□□□□ -0.24
CACTIN-203ENST00000429344 UNQ6126/PRO20091Q6UXV3 157 aa13.55□□□□□ -0.24
CACTIN-203ENST00000429344 KRT77Q7Z794 578 aa13.55□□□□□ -0.24
CACTIN-203ENST00000429344 SLC35F3Q8IY50 421 aa13.55□□□□□ -0.24
CACTIN-203ENST00000429344 PRR22Q8IZ63 422 aa13.55□□□□□ -0.24
CACTIN-203ENST00000429344 ZDHHC12Q96GR4 267 aa13.55□□□□□ -0.24
CACTIN-203ENST00000429344 ADAT1Q9BUB4 502 aaKnown RBP13.55□□□□□ -0.24
CACTIN-203ENST00000429344 SARGQ9BW04 601 aa13.55□□□□□ -0.24
CACTIN-203ENST00000429344 SYT4Q9H2B2 425 aa13.55□□□□□ -0.24
CACTIN-203ENST00000429344 WDR76Q9H967 626 aa13.55□□□□□ -0.24
CACTIN-203ENST00000429344 LYRM4Q9HD34 91 aa13.55□□□□□ -0.24
CACTIN-203ENST00000429344 NPDC1Q9NQX5 325 aaPredicted RBP13.55□□□□□ -0.24
CACTIN-203ENST00000429344 C14orf105Q9NVL8 296 aa13.55□□□□□ -0.24
CACTIN-203ENST00000429344 DCTN6O00399 190 aa13.55□□□□□ -0.24
CACTIN-203ENST00000429344 BRINP1O60477 761 aa13.55□□□□□ -0.24
CACTIN-203ENST00000429344 HIST1H2ABP04908 130 aa13.55□□□□□ -0.24
CACTIN-203ENST00000429344 RAG2P55895 527 aa13.55□□□□□ -0.24
CACTIN-203ENST00000429344 RGS7BPQ6MZT1 257 aaPredicted RBP13.55□□□□□ -0.24
CACTIN-203ENST00000429344 ULK3Q6PHR2 472 aa13.55□□□□□ -0.24
CACTIN-203ENST00000429344 Q7L0L9 218 aa13.55□□□□□ -0.24
CACTIN-203ENST00000429344 HIST3H2AQ7L7L0 130 aa13.55□□□□□ -0.24
CACTIN-203ENST00000429344 ATOH1Q92858 354 aaPredicted RBP13.55□□□□□ -0.24
CACTIN-203ENST00000429344 HIST1H2ACQ93077 130 aa13.55□□□□□ -0.24
CACTIN-203ENST00000429344 POFUT1Q9H488 388 aa13.55□□□□□ -0.24
CACTIN-203ENST00000429344 CGGBP1Q9UFW8 167 aaPredicted RBP13.55□□□□□ -0.24
CACTIN-203ENST00000429344 SLC22A13Q9Y226 551 aa13.55□□□□□ -0.24
CACTIN-203ENST00000429344 C13orf42A0A1B0GVH6 325 aa13.54□□□□□ -0.24
CACTIN-203ENST00000429344 FITM1A5D6W6 292 aa13.54□□□□□ -0.24
CACTIN-203ENST00000429344 FAM74A7A6NL05 159 aa13.54□□□□□ -0.24
CACTIN-203ENST00000429344 EEF1E1-BLOC1S5C9J1V9 151 aa13.54□□□□□ -0.24
CACTIN-203ENST00000429344 KRBOX1C9JBD0 128 aa13.54□□□□□ -0.24
CACTIN-203ENST00000429344 GAAP10253 952 aa13.54□□□□□ -0.24
CACTIN-203ENST00000429344 GABRA1P14867 456 aa13.54□□□□□ -0.24
CACTIN-203ENST00000429344 PRSS3P35030 304 aa13.54□□□□□ -0.24
CACTIN-203ENST00000429344 OR1D5P58170 312 aa13.54□□□□□ -0.24
CACTIN-203ENST00000429344 FAM74A3Q4VXF1 159 aa13.54□□□□□ -0.24
CACTIN-203ENST00000429344 SEZ6L2Q6UXD5 910 aa13.54□□□□□ -0.24
CACTIN-203ENST00000429344 DND1Q8IYX4 353 aaKnown RBP13.54□□□□□ -0.24
CACTIN-203ENST00000429344 MARVELD3Q96A59 401 aa13.54□□□□□ -0.24
CACTIN-203ENST00000429344 HAVCR1Q96D42 359 aa13.54□□□□□ -0.24
CACTIN-203ENST00000429344 ZNF75AQ96N20 296 aa13.54□□□□□ -0.24
CACTIN-203ENST00000429344 CMKLR1Q99788 373 aa13.54□□□□□ -0.24
CACTIN-203ENST00000429344 EVA1AQ9H8M9 152 aa13.54□□□□□ -0.24
CACTIN-203ENST00000429344 PCDHB16Q9NRJ7 776 aa13.54□□□□□ -0.24
CACTIN-203ENST00000429344 GRHPRQ9UBQ7 328 aa13.54□□□□□ -0.24
CACTIN-203ENST00000429344 CACNA1EQ15878 2313 aa13.54□□□□□ -0.24
CACTIN-203ENST00000429344 CNOT1A5YKK6 2376 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms