RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 C2CD4CQ8TF44 421 aa11.32□□□□□ -0.6
CDH3-202ENST00000429102 FAM3DQ96BQ1 224 aa11.32□□□□□ -0.6
CDH3-202ENST00000429102 ZNF768Q9H5H4 540 aaKnown RBP11.32□□□□□ -0.6
CDH3-202ENST00000429102 DHCR7Q9UBM7 475 aaKnown RBP11.32□□□□□ -0.6
CDH3-202ENST00000429102 KLF15Q9UIH9 416 aa11.32□□□□□ -0.6
CDH3-202ENST00000429102 FREM2Q5SZK8 3169 aa11.32□□□□□ -0.6
CDH3-202ENST00000429102 C5orf51A6NDU8 294 aa11.32□□□□□ -0.6
CDH3-202ENST00000429102 FAM74A7A6NL05 159 aa11.32□□□□□ -0.6
CDH3-202ENST00000429102 C17orf105B2RV13 164 aa11.32□□□□□ -0.6
CDH3-202ENST00000429102 TGM6O95932 706 aa11.32□□□□□ -0.6
CDH3-202ENST00000429102 WNT11O96014 354 aa11.32□□□□□ -0.6
CDH3-202ENST00000429102 ARRB1P49407 418 aaPredicted RBP11.32□□□□□ -0.6
CDH3-202ENST00000429102 PSMD4P55036 377 aaKnown RBP11.32□□□□□ -0.6
CDH3-202ENST00000429102 RBMS2Q15434 407 aaKnown RBP11.32□□□□□ -0.6
CDH3-202ENST00000429102 FAM74A3Q4VXF1 159 aa11.32□□□□□ -0.6
CDH3-202ENST00000429102 NHLRC3Q5JS37 347 aa11.32□□□□□ -0.6
CDH3-202ENST00000429102 ZNF626Q68DY1 528 aa11.32□□□□□ -0.6
CDH3-202ENST00000429102 C3orf33Q6P1S2 294 aa11.32□□□□□ -0.6
CDH3-202ENST00000429102 GALNTL5Q7Z4T8 443 aa11.32□□□□□ -0.6
CDH3-202ENST00000429102 RTN4RL2Q86UN3 420 aa11.32□□□□□ -0.6
CDH3-202ENST00000429102 STEAP2Q8NFT2 490 aa11.32□□□□□ -0.6
CDH3-202ENST00000429102 MIB2Q96AX9 1013 aa11.32□□□□□ -0.6
CDH3-202ENST00000429102 TGM7Q96PF1 710 aa11.32□□□□□ -0.6
CDH3-202ENST00000429102 NPDC1Q9NQX5 325 aaPredicted RBP11.32□□□□□ -0.6
CDH3-202ENST00000429102 TAS2R4Q9NYW5 299 aa11.32□□□□□ -0.6
CDH3-202ENST00000429102 PRRC2CQ9Y520 2896 aaKnown RBP11.31□□□□□ -0.6
CDH3-202ENST00000429102 F5H0A9 414 aaPredicted RBP11.31□□□□□ -0.6
CDH3-202ENST00000429102 H0YIG0 161 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 DCNP07585 359 aaKnown RBP11.31□□□□□ -0.6
CDH3-202ENST00000429102 MYF5P13349 255 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 ADAM8P78325 824 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 TMEM240Q5SV17 173 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 C1orf189Q5VU69 101 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 NKAIN2Q5VXU1 208 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 MCATQ8IVS2 390 aaKnown RBP11.31□□□□□ -0.6
CDH3-202ENST00000429102 SYS1Q8N2H4 156 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 NAXEQ8NCW5 288 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 GPR148Q8TDV2 347 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 CCDC74AQ96AQ1 378 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 MRPL48Q96GC5 212 aaKnown RBP11.31□□□□□ -0.6
CDH3-202ENST00000429102 NUDT22Q9BRQ3 303 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.31□□□□□ -0.6
CDH3-202ENST00000429102 ASF1BQ9NVP2 202 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 A0A087WUJ7 227 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 K7EQS6 105 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 SCDO00767 359 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 SLC25A12O75746 678 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 PNPP00491 289 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 CD14P08571 375 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 CXCR1P25024 350 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 DNASE1L1P49184 302 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 ZP2Q05996 745 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 CEBPEQ15744 281 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 MOGAT2Q3SYC2 334 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 LINC01590Q5TEZ4 76 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 TTLL10Q6ZVT0 673 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 GPAT4Q86UL3 456 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 ADGRG3Q86Y34 549 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 ARMC10Q8N2F6 343 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 RTN4RQ9BZR6 473 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 COMMD9Q9P000 198 aa11.31□□□□□ -0.6
CDH3-202ENST00000429102 GGT3PA6NGU5 568 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 PRAF2O60831 178 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 GLSO94925 669 aaPredicted RBP11.3□□□□□ -0.6
CDH3-202ENST00000429102 NKX2-2O95096 273 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 HLA-AP01891 365 aaKnown RBP11.3□□□□□ -0.6
CDH3-202ENST00000429102 GIPP09681 153 aaPredicted RBP11.3□□□□□ -0.6
CDH3-202ENST00000429102 CT45A8P0DMV1 189 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 CT45A9P0DMV2 189 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 SLC2A1P11166 492 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 NFATC4Q14934 902 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 CT45A2Q5DJT8 189 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 BIVMQ86UB2 503 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 TSLPQ969D9 159 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 LRRC46Q96FV0 321 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 STACQ99469 402 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 NXF5Q9H1B4 397 aaKnown RBP11.3□□□□□ -0.6
CDH3-202ENST00000429102 EMC9Q9Y3B6 208 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 HRH3Q9Y5N1 445 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 TMEM272A0A1B0GTI8 110 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 CLDN4O14493 209 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 CTAG2O75638 210 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 RENP00797 406 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 TSFMP43897 325 aaKnown RBP11.3□□□□□ -0.6
CDH3-202ENST00000429102 CXADRP78310 365 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 RAB11BQ15907 218 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 MESTQ5EB52 335 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 RAB12Q6IQ22 244 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 SLC51BQ86UW2 128 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 PRSS35Q8N3Z0 413 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 BAHD1Q8TBE0 780 aaPredicted RBP11.3□□□□□ -0.6
CDH3-202ENST00000429102 NUDCD2Q8WVJ2 157 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 TAAR8Q969N4 342 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 SLC25A44Q96H78 314 aaPredicted RBP11.3□□□□□ -0.6
CDH3-202ENST00000429102 INTS14Q96SY0 518 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 C7orf50Q9BRJ6 194 aaKnown RBP11.3□□□□□ -0.6
CDH3-202ENST00000429102 IGHV3-20A0A0C4DH32 117 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 GPRIN2O60269 458 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 UPK3AO75631 287 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 GNRH1P01148 92 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms