RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 HIST1H2ABP04908 130 aa13.26□□□□□ -0.29
SEC13-210ENST00000428626 ZNF250P15622 560 aa13.26□□□□□ -0.29
SEC13-210ENST00000428626 CDAP32320 146 aa13.26□□□□□ -0.29
SEC13-210ENST00000428626 ZNF133P52736 654 aaPredicted RBP13.26□□□□□ -0.29
SEC13-210ENST00000428626 CLRN1P58418 232 aa13.26□□□□□ -0.29
SEC13-210ENST00000428626 LMO4P61968 165 aa13.26□□□□□ -0.29
SEC13-210ENST00000428626 FMODQ06828 376 aa13.26□□□□□ -0.29
SEC13-210ENST00000428626 LAPTM4AQ15012 233 aa13.26□□□□□ -0.29
SEC13-210ENST00000428626 ARMC4Q5T2S8 1044 aa13.26□□□□□ -0.29
SEC13-210ENST00000428626 RGS7BPQ6MZT1 257 aaPredicted RBP13.26□□□□□ -0.29
SEC13-210ENST00000428626 CGB2Q6NT52 195 aa13.26□□□□□ -0.29
SEC13-210ENST00000428626 DEF8Q6ZN54 512 aa13.26□□□□□ -0.29
SEC13-210ENST00000428626 HIST3H2AQ7L7L0 130 aa13.26□□□□□ -0.29
SEC13-210ENST00000428626 SLC16A14Q7RTX9 510 aa13.26□□□□□ -0.29
SEC13-210ENST00000428626 LRRC18Q8N456 261 aa13.26□□□□□ -0.29
SEC13-210ENST00000428626 CPEB3Q8NE35 698 aaKnown RBP13.26□□□□□ -0.29
SEC13-210ENST00000428626 HDAC2Q92769 488 aaKnown RBP13.26□□□□□ -0.29
SEC13-210ENST00000428626 HIST1H2ACQ93077 130 aa13.26□□□□□ -0.29
SEC13-210ENST00000428626 NABP1Q96AH0 204 aa13.26□□□□□ -0.29
SEC13-210ENST00000428626 LRRC58Q96CX6 371 aa13.26□□□□□ -0.29
SEC13-210ENST00000428626 RNF121Q9H920 327 aa13.26□□□□□ -0.29
SEC13-210ENST00000428626 LPAR2Q9HBW0 351 aa13.26□□□□□ -0.29
SEC13-210ENST00000428626 GMPR2Q9P2T1 348 aaKnown RBP13.26□□□□□ -0.29
SEC13-210ENST00000428626 RIMS3Q9UJD0 308 aa13.26□□□□□ -0.29
SEC13-210ENST00000428626 WNK2Q9Y3S1 2297 aa13.25□□□□□ -0.29
SEC13-210ENST00000428626 B4DSR2 109 aa13.25□□□□□ -0.29
SEC13-210ENST00000428626 MGRN1O60291 552 aa13.25□□□□□ -0.29
SEC13-210ENST00000428626 SNAP29O95721 258 aa13.25□□□□□ -0.29
SEC13-210ENST00000428626 SAGP10523 405 aaPredicted RBP13.25□□□□□ -0.29
SEC13-210ENST00000428626 ACADSP16219 412 aa13.25□□□□□ -0.29
SEC13-210ENST00000428626 ITGA2P17301 1181 aa13.25□□□□□ -0.29
SEC13-210ENST00000428626 KLF10Q13118 480 aa13.25□□□□□ -0.29
SEC13-210ENST00000428626 CYLC2Q14093 348 aaPredicted RBP13.25□□□□□ -0.29
SEC13-210ENST00000428626 C10orf128Q5T292 105 aa13.25□□□□□ -0.29
SEC13-210ENST00000428626 METTL21CQ5VZV1 264 aa13.25□□□□□ -0.29
SEC13-210ENST00000428626 REP15Q6BDI9 236 aa13.25□□□□□ -0.29
SEC13-210ENST00000428626 TMEM53Q6P2H8 277 aa13.25□□□□□ -0.29
SEC13-210ENST00000428626 CLDN22Q8N7P3 220 aa13.25□□□□□ -0.29
SEC13-210ENST00000428626 OR8J3Q8NGG0 315 aa13.25□□□□□ -0.29
SEC13-210ENST00000428626 TMEM239Q8WW34 195 aa13.25□□□□□ -0.29
SEC13-210ENST00000428626 LIPHQ8WWY8 451 aa13.25□□□□□ -0.29
SEC13-210ENST00000428626 SGTBQ96EQ0 304 aa13.25□□□□□ -0.29
SEC13-210ENST00000428626 CDH20Q9HBT6 801 aa13.25□□□□□ -0.29
SEC13-210ENST00000428626 INIPQ9NRY2 104 aa13.25□□□□□ -0.29
SEC13-210ENST00000428626 ARHGAP32A7KAX9 2087 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 A0A1W2PRG6 482 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 C17orf100A8MU93 164 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 PPIHO43447 177 aaKnown RBP13.24□□□□□ -0.29
SEC13-210ENST00000428626 CDC14BO60729 498 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 OR5F1O95221 314 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 FARS2O95363 451 aaKnown RBP13.24□□□□□ -0.29
SEC13-210ENST00000428626 LCKP06239 509 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 GAAP10253 952 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 H2AFXP16104 143 aaPredicted RBP13.24□□□□□ -0.29
SEC13-210ENST00000428626 LSP1P33241 339 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 SRP14P37108 136 aaKnown RBP13.24□□□□□ -0.29
SEC13-210ENST00000428626 WNT5AP41221 380 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 RBM34P42696 430 aaKnown RBP13.24□□□□□ -0.29
SEC13-210ENST00000428626 UCP2P55851 309 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 TMEM33P57088 247 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 KLF3P57682 345 aaPredicted RBP13.24□□□□□ -0.29
SEC13-210ENST00000428626 TAS2R41P59536 307 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 CCL8P80075 99 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 MRPS11P82912 194 aaKnown RBP13.24□□□□□ -0.29
SEC13-210ENST00000428626 GLO1Q04760 184 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 HNRNPA0Q13151 305 aaKnown RBP13.24□□□□□ -0.29
SEC13-210ENST00000428626 NKPD1Q17RQ9 610 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 SLC36A2Q495M3 483 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 NRN1LQ496H8 165 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 PABPC1L2AQ5JQF8 200 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 HDXQ7Z353 690 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 MEX3DQ86XN8 651 aaKnown RBP13.24□□□□□ -0.29
SEC13-210ENST00000428626 ZNF101Q8IZC7 436 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 RBM15BQ8NDT2 890 aaKnown RBP13.24□□□□□ -0.29
SEC13-210ENST00000428626 SYNPRQ8TBG9 265 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 C10orf82Q8WW14 230 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 RASSF5Q8WWW0 418 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 TMEM186Q96B77 213 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 ECSITQ9BQ95 431 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 SIKE1Q9BRV8 207 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 HINT3Q9NQE9 182 aaKnown RBP13.24□□□□□ -0.29
SEC13-210ENST00000428626 SAR1AQ9NR31 198 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 HIF1ANQ9NWT6 349 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 ZNF346Q9UL40 294 aaKnown RBP13.24□□□□□ -0.29
SEC13-210ENST00000428626 CACNG2Q9Y698 323 aa13.24□□□□□ -0.29
SEC13-210ENST00000428626 LOC100509620A0A075B734 347 aa13.23□□□□□ -0.29
SEC13-210ENST00000428626 MCIDASD6RGH6 385 aa13.23□□□□□ -0.29
SEC13-210ENST00000428626 MRASO14807 208 aa13.23□□□□□ -0.29
SEC13-210ENST00000428626 TCF21O43680 179 aa13.23□□□□□ -0.29
SEC13-210ENST00000428626 IGF2P01344 180 aa13.23□□□□□ -0.29
SEC13-210ENST00000428626 ZNF32P17041 273 aa13.23□□□□□ -0.29
SEC13-210ENST00000428626 ZNF84P51523 738 aa13.23□□□□□ -0.29
SEC13-210ENST00000428626 MRPS34P82930 218 aaKnown RBP13.23□□□□□ -0.29
SEC13-210ENST00000428626 FHL1Q13642 323 aa13.23□□□□□ -0.29
SEC13-210ENST00000428626 TBC1D28Q2M2D7 210 aa13.23□□□□□ -0.29
SEC13-210ENST00000428626 CYBRD1Q53TN4 286 aa13.23□□□□□ -0.29
SEC13-210ENST00000428626 AVPI1Q5T686 147 aa13.23□□□□□ -0.29
SEC13-210ENST00000428626 SLC25A47Q6Q0C1 308 aa13.23□□□□□ -0.29
SEC13-210ENST00000428626 C1orf229Q6ZS94 237 aaPredicted RBP13.23□□□□□ -0.29
SEC13-210ENST00000428626 GLCCI1Q86VQ1 547 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms