RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 SH3D21A4FU49 640 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 OR5H1A6NKK0 313 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 KHDRBS3O75525 346 aaKnown RBP13.3□□□□□ -0.28
VARS2-203ENST00000428017 SEC14L2O76054 403 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 COX6B1P14854 86 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 PEX2P28328 305 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 CAPZA2P47755 286 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 CENPAP49450 140 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 CDK5Q00535 292 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 SNAPC1Q16533 368 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 HIKESHIQ53FT3 197 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 TIMM23BQ5SRD1 257 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 C10orf128Q5T292 105 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 TMEM236Q5W0B7 351 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 SP5Q6BEB4 398 aaPredicted RBP13.3□□□□□ -0.28
VARS2-203ENST00000428017 DMRTC2Q8IXT2 367 aaPredicted RBP13.3□□□□□ -0.28
VARS2-203ENST00000428017 CCDC36Q8IYA8 594 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 GALNT4Q8N4A0 578 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 PACRGLQ8N7B6 248 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 LINC01560Q8TB33 94 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 NANOS1Q8WY41 292 aaKnown RBP13.3□□□□□ -0.28
VARS2-203ENST00000428017 OTULINQ96BN8 352 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 NMD3Q96D46 503 aaKnown RBP13.3□□□□□ -0.28
VARS2-203ENST00000428017 ZNF837Q96EG3 531 aaPredicted RBP13.3□□□□□ -0.28
VARS2-203ENST00000428017 ZC3HAV1LQ96H79 300 aaKnown RBP13.3□□□□□ -0.28
VARS2-203ENST00000428017 DACH2Q96NX9 599 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 MUS81Q96NY9 551 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 SLC29A1Q99808 456 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 SPOCK3Q9BQ16 436 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 GABARAPL3Q9BY60 117 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 SEC61A2Q9H9S3 476 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 RPRD1BQ9NQG5 326 aaKnown RBP13.3□□□□□ -0.28
VARS2-203ENST00000428017 CMC2Q9NRP2 79 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 ZNF226Q9NYT6 803 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 TVP23BQ9NYZ1 205 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 PLEKHB1Q9UF11 243 aaPredicted RBP13.3□□□□□ -0.28
VARS2-203ENST00000428017 HELZ2Q9BYK8 2649 aaKnown RBP13.3□□□□□ -0.28
VARS2-203ENST00000428017 MGRN1O60291 552 aa13.29□□□□□ -0.28
VARS2-203ENST00000428017 WNT11O96014 354 aa13.29□□□□□ -0.28
VARS2-203ENST00000428017 OR8G3PP0DMU2 310 aa13.29□□□□□ -0.28
VARS2-203ENST00000428017 B4GALT1P15291 398 aa13.29□□□□□ -0.28
VARS2-203ENST00000428017 ZNF133P52736 654 aaPredicted RBP13.29□□□□□ -0.28
VARS2-203ENST00000428017 RIPK1Q13546 671 aa13.29□□□□□ -0.28
VARS2-203ENST00000428017 CRMP1Q14194 572 aa13.29□□□□□ -0.28
VARS2-203ENST00000428017 ZIK1Q3SY52 487 aaPredicted RBP13.29□□□□□ -0.28
VARS2-203ENST00000428017 TBRG1Q3YBR2 411 aa13.29□□□□□ -0.28
VARS2-203ENST00000428017 ACSM5Q6NUN0 579 aa13.29□□□□□ -0.28
VARS2-203ENST00000428017 SLC25A47Q6Q0C1 308 aa13.29□□□□□ -0.28
VARS2-203ENST00000428017 CYB561A3Q8NBI2 242 aa13.29□□□□□ -0.28
VARS2-203ENST00000428017 SLC37A3Q8NCC5 494 aa13.29□□□□□ -0.28
VARS2-203ENST00000428017 NPEPL1Q8NDH3 523 aa13.29□□□□□ -0.28
VARS2-203ENST00000428017 OR2T4Q8NH00 348 aa13.29□□□□□ -0.28
VARS2-203ENST00000428017 OR52N5Q8NH56 324 aa13.29□□□□□ -0.28
VARS2-203ENST00000428017 FAM222BQ8WU58 562 aa13.29□□□□□ -0.28
VARS2-203ENST00000428017 BCL2L2Q92843 193 aaPredicted RBP13.29□□□□□ -0.28
VARS2-203ENST00000428017 WFIKKN1Q96NZ8 548 aa13.29□□□□□ -0.28
VARS2-203ENST00000428017 NUAK2Q9H093 628 aa13.29□□□□□ -0.28
VARS2-203ENST00000428017 KCNN2Q9H2S1 579 aa13.29□□□□□ -0.28
VARS2-203ENST00000428017 SRA1Q9HD15 236 aaKnown RBP13.29□□□□□ -0.28
VARS2-203ENST00000428017 NGBQ9NPG2 151 aa13.29□□□□□ -0.28
VARS2-203ENST00000428017 OBP2BQ9NPH6 170 aa13.29□□□□□ -0.28
VARS2-203ENST00000428017 SLC17A5Q9NRA2 495 aa13.29□□□□□ -0.28
VARS2-203ENST00000428017 TMEM38BQ9NVV0 291 aa13.29□□□□□ -0.28
VARS2-203ENST00000428017 NKX1-2Q9UD57 310 aaPredicted RBP13.29□□□□□ -0.28
VARS2-203ENST00000428017 AMDHD2Q9Y303 409 aa13.29□□□□□ -0.28
VARS2-203ENST00000428017 INTS1Q8N201 2190 aaKnown RBP13.29□□□□□ -0.28
VARS2-203ENST00000428017 PCNX1Q96RV3 2341 aa13.29□□□□□ -0.28
VARS2-203ENST00000428017 OR6C68A6NDL8 312 aa13.28□□□□□ -0.28
VARS2-203ENST00000428017 ZAR1LA6NP61 321 aa13.28□□□□□ -0.28
VARS2-203ENST00000428017 CASQ2O14958 399 aaPredicted RBP13.28□□□□□ -0.28
VARS2-203ENST00000428017 SURF4O15260 269 aa13.28□□□□□ -0.28
VARS2-203ENST00000428017 HOXB1P14653 301 aaPredicted RBP13.28□□□□□ -0.28
VARS2-203ENST00000428017 CTLA4P16410 223 aa13.28□□□□□ -0.28
VARS2-203ENST00000428017 NPR2P20594 1047 aa13.28□□□□□ -0.28
VARS2-203ENST00000428017 PPA1Q15181 289 aa13.28□□□□□ -0.28
VARS2-203ENST00000428017 TAB1Q15750 504 aa13.28□□□□□ -0.28
VARS2-203ENST00000428017 SGCAQ16586 387 aa13.28□□□□□ -0.28
VARS2-203ENST00000428017 NRN1LQ496H8 165 aa13.28□□□□□ -0.28
VARS2-203ENST00000428017 C1QTNF12Q5T7M4 302 aa13.28□□□□□ -0.28
VARS2-203ENST00000428017 OGFRL1Q5TC84 451 aaPredicted RBP13.28□□□□□ -0.28
VARS2-203ENST00000428017 SLX4IPQ5VYV7 408 aa13.28□□□□□ -0.28
VARS2-203ENST00000428017 ZNF627Q7L945 461 aa13.28□□□□□ -0.28
VARS2-203ENST00000428017 WFDC8Q8IUA0 241 aa13.28□□□□□ -0.28
VARS2-203ENST00000428017 GLB1L2Q8IW92 636 aa13.28□□□□□ -0.28
VARS2-203ENST00000428017 SLC22A24Q8N4F4 322 aa13.28□□□□□ -0.28
VARS2-203ENST00000428017 PROKR2Q8NFJ6 384 aa13.28□□□□□ -0.28
VARS2-203ENST00000428017 RDH12Q96NR8 316 aa13.28□□□□□ -0.28
VARS2-203ENST00000428017 VCX3BQ9H321 246 aa13.28□□□□□ -0.28
VARS2-203ENST00000428017 FN3KQ9H479 309 aa13.28□□□□□ -0.28
VARS2-203ENST00000428017 TOR3AQ9H497 397 aa13.28□□□□□ -0.28
VARS2-203ENST00000428017 SMPD3Q9NY59 655 aaPredicted RBP13.28□□□□□ -0.28
VARS2-203ENST00000428017 CRIM1Q9NZV1 1036 aa13.28□□□□□ -0.28
VARS2-203ENST00000428017 FKBP7Q9Y680 259 aa13.28□□□□□ -0.28
VARS2-203ENST00000428017 USP9XQ93008 2570 aaPredicted RBP13.28□□□□□ -0.28
VARS2-203ENST00000428017 FLNCQ14315 2725 aa13.28□□□□□ -0.28
VARS2-203ENST00000428017 FASNP49327 2511 aaKnown RBP13.27□□□□□ -0.29
VARS2-203ENST00000428017 IGKV1D-43A0A0B4J1Z2 117 aa13.27□□□□□ -0.29
VARS2-203ENST00000428017 A0A1W2PR80 420 aa13.27□□□□□ -0.29
VARS2-203ENST00000428017 PRR23D1E9PI22 279 aaPredicted RBP13.27□□□□□ -0.29
VARS2-203ENST00000428017 ATP6V1G2O95670 118 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms