RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 NKX2-1P43699 371 aaPredicted RBP13.34□□□□□ -0.27
PTPN13-203ENST00000427191 SLC5A12Q1EHB4 618 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 MAMDC4Q6UXC1 1216 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 HTR3DQ70Z44 454 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 RTL8AQ9BWD3 113 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 NKX2-4Q9H2Z4 354 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 NTN4Q9HB63 628 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 G3V3Q6 166 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 DEGS1O15121 323 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 CD14P08571 375 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 MMP7P09237 267 aaPredicted RBP13.34□□□□□ -0.27
PTPN13-203ENST00000427191 C1orf61Q13536 156 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 WDTC1Q8N5D0 677 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 PADI1Q9ULC6 663 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 TRBV4-1A0A0J9YWV2 114 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 TRABD2BA6NFA1 517 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 ACHEP22303 614 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 TMEM217Q8N7C4 229 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 LRRC37A3O60309 1634 aa13.33□□□□□ -0.27
PTPN13-203ENST00000427191 LDB3O75112 727 aa13.33□□□□□ -0.27
PTPN13-203ENST00000427191 GLCEO94923 617 aa13.33□□□□□ -0.27
PTPN13-203ENST00000427191 CTSAP10619 480 aa13.33□□□□□ -0.27
PTPN13-203ENST00000427191 PRDX1Q06830 199 aaKnown RBP13.33□□□□□ -0.27
PTPN13-203ENST00000427191 SIX1Q15475 284 aaPredicted RBP13.33□□□□□ -0.27
PTPN13-203ENST00000427191 C16orf70Q9BSU1 422 aa13.33□□□□□ -0.27
PTPN13-203ENST00000427191 MED16Q9Y2X0 877 aa13.33□□□□□ -0.27
PTPN13-203ENST00000427191 CAMTA1Q9Y6Y1 1673 aa13.33□□□□□ -0.28
PTPN13-203ENST00000427191 TMEM72A0PK05 275 aa13.33□□□□□ -0.28
PTPN13-203ENST00000427191 CD68P34810 354 aaPredicted RBP13.33□□□□□ -0.28
PTPN13-203ENST00000427191 PLXDC2Q6UX71 529 aa13.33□□□□□ -0.28
PTPN13-203ENST00000427191 ZPBPQ9BS86 351 aa13.33□□□□□ -0.28
PTPN13-203ENST00000427191 GALNT9Q9HCQ5 603 aa13.33□□□□□ -0.28
PTPN13-203ENST00000427191 DRGXA6NNA5 263 aa13.33□□□□□ -0.28
PTPN13-203ENST00000427191 FAM3CQ92520 227 aa13.33□□□□□ -0.28
PTPN13-203ENST00000427191 PRSS16Q9NQE7 514 aa13.33□□□□□ -0.28
PTPN13-203ENST00000427191 TMEM235A6NFC5 223 aa13.33□□□□□ -0.28
PTPN13-203ENST00000427191 TMEM189-UBE2V1I3L0A0 370 aa13.33□□□□□ -0.28
PTPN13-203ENST00000427191 CSF3P09919 207 aa13.33□□□□□ -0.28
PTPN13-203ENST00000427191 MAP2K6P52564 334 aa13.33□□□□□ -0.28
PTPN13-203ENST00000427191 ZNF90Q03938 601 aa13.33□□□□□ -0.28
PTPN13-203ENST00000427191 COL9A3Q14050 684 aaPredicted RBP13.33□□□□□ -0.28
PTPN13-203ENST00000427191 ARHGAP11BQ3KRB8 267 aa13.33□□□□□ -0.28
PTPN13-203ENST00000427191 SLCO3A1Q9UIG8 710 aa13.33□□□□□ -0.28
PTPN13-203ENST00000427191 PIGLQ9Y2B2 252 aa13.33□□□□□ -0.28
PTPN13-203ENST00000427191 HEMK1Q9Y5R4 338 aaPredicted RBP13.33□□□□□ -0.28
PTPN13-203ENST00000427191 VAMP5O95183 116 aa13.33□□□□□ -0.28
PTPN13-203ENST00000427191 HTR6P50406 440 aa13.33□□□□□ -0.28
PTPN13-203ENST00000427191 PTTG1IPP53801 180 aa13.33□□□□□ -0.28
PTPN13-203ENST00000427191 RPS25P62851 125 aaKnown RBP13.33□□□□□ -0.28
PTPN13-203ENST00000427191 HSF5Q4G112 596 aaPredicted RBP13.33□□□□□ -0.28
PTPN13-203ENST00000427191 PRR22Q8IZ63 422 aa13.33□□□□□ -0.28
PTPN13-203ENST00000427191 OR13C9Q8NGT0 318 aa13.33□□□□□ -0.28
PTPN13-203ENST00000427191 SLC38A5Q8WUX1 472 aa13.33□□□□□ -0.28
PTPN13-203ENST00000427191 ZNF583Q96ND8 569 aa13.33□□□□□ -0.28
PTPN13-203ENST00000427191 MIA3Q5JRA6 1907 aa13.33□□□□□ -0.28
PTPN13-203ENST00000427191 SLC38A6Q8IZM9 456 aa13.33□□□□□ -0.28
PTPN13-203ENST00000427191 ZFPM2Q8WW38 1151 aa13.33□□□□□ -0.28
PTPN13-203ENST00000427191 A0A0A6YYC8 382 aaPredicted RBP13.32□□□□□ -0.28
PTPN13-203ENST00000427191 I3L1I5 382 aaPredicted RBP13.32□□□□□ -0.28
PTPN13-203ENST00000427191 AIFM1O95831 613 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 GASTP01350 101 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 SNRPBP14678 240 aaKnown RBP13.32□□□□□ -0.28
PTPN13-203ENST00000427191 TPPP2P59282 170 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 DCDP81605 110 aaKnown RBP13.32□□□□□ -0.28
PTPN13-203ENST00000427191 GLYATL3Q5SZD4 288 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 ZNF561Q8N587 486 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 LCORQ96JN0 433 aaPredicted RBP13.32□□□□□ -0.28
PTPN13-203ENST00000427191 CXorf58Q96LI9 332 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 CPPED1Q9BRF8 314 aaPredicted RBP13.32□□□□□ -0.28
PTPN13-203ENST00000427191 BMPR1AP36894 532 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 CARD18P57730 90 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 REEP5Q00765 189 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 VAMP3Q15836 100 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 GNB4Q9HAV0 340 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 H3BQ06 376 aaPredicted RBP13.32□□□□□ -0.28
PTPN13-203ENST00000427191 CLDN17P56750 224 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 ERHP84090 104 aaKnown RBP13.32□□□□□ -0.28
PTPN13-203ENST00000427191 DOC2BQ14184 412 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 VRK2Q86Y07 508 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 HSD17B11Q8NBQ5 300 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 AGBL5Q8NDL9 886 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 DHRS9Q9BPW9 319 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 BCO1Q9HAY6 547 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 CYB5R1Q9UHQ9 305 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 MRPS21P82921 87 aaKnown RBP13.32□□□□□ -0.28
PTPN13-203ENST00000427191 TMEM176BQ3YBM2 270 aaPredicted RBP13.32□□□□□ -0.28
PTPN13-203ENST00000427191 C19orf47Q8N9M1 422 aaKnown RBP13.32□□□□□ -0.28
PTPN13-203ENST00000427191 EMG1Q92979 244 aaKnown RBP13.32□□□□□ -0.28
PTPN13-203ENST00000427191 KLRC4-KLRK1H3BQV0 150 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 SOCS6O14544 535 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 SLC31A2O15432 143 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 COX5AP20674 150 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 GCSHP23434 173 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 FAM189BP81408 668 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 FCRL6Q6DN72 434 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 GPRIN1Q7Z2K8 1008 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 NRG4Q8WWG1 115 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 ZNF724A8MTY0 619 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 SNRPGP15A8MWD9 76 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 ELAVL4P26378 380 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms