RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 IGHV4-34P06331 123 aa12.64□□□□□ -0.39
RPL28-202ENST00000426763 S100A1P23297 94 aa12.64□□□□□ -0.39
RPL28-202ENST00000426763 TAS2R19P59542 299 aa12.64□□□□□ -0.39
RPL28-202ENST00000426763 FAPQ12884 760 aa12.64□□□□□ -0.39
RPL28-202ENST00000426763 ZIC1Q15915 447 aa12.64□□□□□ -0.39
RPL28-202ENST00000426763 JMJD6Q6NYC1 403 aaPredicted RBP12.64□□□□□ -0.39
RPL28-202ENST00000426763 RIMKLAQ8IXN7 391 aa12.64□□□□□ -0.39
RPL28-202ENST00000426763 NKAIN3Q8N8D7 197 aa12.64□□□□□ -0.39
RPL28-202ENST00000426763 FGGYQ96C11 551 aa12.64□□□□□ -0.39
RPL28-202ENST00000426763 FAM60AQ9NP50 221 aa12.64□□□□□ -0.39
RPL28-202ENST00000426763 NUBP2Q9Y5Y2 271 aa12.64□□□□□ -0.39
RPL28-202ENST00000426763 LRRC30A6NM36 301 aa12.64□□□□□ -0.39
RPL28-202ENST00000426763 SPI1P17947 270 aa12.64□□□□□ -0.39
RPL28-202ENST00000426763 KIAA0040Q15053 153 aa12.64□□□□□ -0.39
RPL28-202ENST00000426763 ZNF766Q5HY98 468 aa12.64□□□□□ -0.39
RPL28-202ENST00000426763 KIRREL2Q6UWL6 708 aa12.64□□□□□ -0.39
RPL28-202ENST00000426763 FAM26EQ8N5C1 309 aa12.64□□□□□ -0.39
RPL28-202ENST00000426763 SIPA1L1O43166 1804 aa12.64□□□□□ -0.39
RPL28-202ENST00000426763 OR6F1Q8NGZ6 308 aa12.64□□□□□ -0.39
RPL28-202ENST00000426763 ARSGQ96EG1 525 aa12.64□□□□□ -0.39
RPL28-202ENST00000426763 GABARAPL3Q9BY60 117 aa12.64□□□□□ -0.39
RPL28-202ENST00000426763 LHX9Q9NQ69 397 aa12.64□□□□□ -0.39
RPL28-202ENST00000426763 DPM1O60762 260 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 ZNF254O75437 659 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 UPK1BO75841 260 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 AVPR2P30518 371 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 HNRNPFP52597 415 aaKnown RBP12.63□□□□□ -0.39
RPL28-202ENST00000426763 CYCSP99999 105 aaKnown RBP12.63□□□□□ -0.39
RPL28-202ENST00000426763 AMER3Q8N944 861 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 BOD1Q96IK1 185 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 NICN1Q9BSH3 213 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 PLA2G3Q9NZ20 509 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 PIGLQ9Y2B2 252 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 NXPH2O95156 264 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 TK1P04183 234 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 TAS2R46P59540 309 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 DOK3Q7L591 496 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 INTS12Q96CB8 462 aaKnown RBP12.63□□□□□ -0.39
RPL28-202ENST00000426763 OR14A2Q96R54 314 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 EGLN1Q9GZT9 426 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 LANCL2Q9NS86 450 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 TDRD15B5MCY1 1934 aaKnown RBP12.63□□□□□ -0.39
RPL28-202ENST00000426763 DOCK3Q8IZD9 2030 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 PIPP12273 146 aaPredicted RBP12.63□□□□□ -0.39
RPL28-202ENST00000426763 LAP3P28838 519 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 VEGFCP49767 419 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 STARD6P59095 220 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 NKG7Q16617 165 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 PRICKLE4Q2TBC4 344 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 METTL11BQ5VVY1 283 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 ZFAND1Q8TCF1 268 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 CPNE4Q96A23 557 aaPredicted RBP12.63□□□□□ -0.39
RPL28-202ENST00000426763 TRAPPC2LQ9UL33 140 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 PATE3B3GLJ2 98 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 NCR1O76036 304 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 SERPINA7P05543 415 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 HOXB3P14651 431 aaPredicted RBP12.63□□□□□ -0.39
RPL28-202ENST00000426763 ACHEP22303 614 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 FCARP24071 287 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 UQCRC1P31930 480 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 ZNF93P35789 620 aaPredicted RBP12.63□□□□□ -0.39
RPL28-202ENST00000426763 CXADRP78310 365 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 ACER2Q5QJU3 275 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 GFRALQ6UXV0 394 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 SLC46A3Q7Z3Q1 461 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 D2HGDHQ8N465 521 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 SEMA6DQ8NFY4 1073 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 OR5M11Q96RB7 305 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 TXNL4BQ9NX01 149 aaKnown RBP12.63□□□□□ -0.39
RPL28-202ENST00000426763 EDARQ9UNE0 448 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 KCNE3Q9Y6H6 103 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 SCN10AQ9Y5Y9 1956 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 TRGV5A0A0B4J1U4 118 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 NKX6-3A6NJ46 265 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 PRAF2O60831 178 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 UBE2UQ5VVX9 321 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 PRAMEF9Q5VWM5 478 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 ACSM5Q6NUN0 579 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 KLHDC8BQ8IXV7 354 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 OR5D18Q8NGL1 313 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 RAB3CQ96E17 227 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 MOB1AQ9H8S9 216 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 HINT3Q9NQE9 182 aaKnown RBP12.63□□□□□ -0.39
RPL28-202ENST00000426763 ASH2LQ9UBL3 628 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 OSGIN1Q9UJX0 560 aa12.63□□□□□ -0.39
RPL28-202ENST00000426763 CCDC163A0A0D9SF12 145 aa12.62□□□□□ -0.39
RPL28-202ENST00000426763 PRSS37A4D1T9 235 aa12.62□□□□□ -0.39
RPL28-202ENST00000426763 ZAR1LA6NP61 321 aa12.62□□□□□ -0.39
RPL28-202ENST00000426763 SHC1P29353 583 aa12.62□□□□□ -0.39
RPL28-202ENST00000426763 UBE2IP63279 158 aaKnown RBP12.62□□□□□ -0.39
RPL28-202ENST00000426763 CLN3Q13286 438 aa12.62□□□□□ -0.39
RPL28-202ENST00000426763 GALEQ14376 348 aa12.62□□□□□ -0.39
RPL28-202ENST00000426763 AGERQ15109 404 aa12.62□□□□□ -0.39
RPL28-202ENST00000426763 SULF2Q8IWU5 870 aa12.62□□□□□ -0.39
RPL28-202ENST00000426763 SLAMF6Q96DU3 332 aa12.62□□□□□ -0.39
RPL28-202ENST00000426763 USB1Q9BQ65 265 aaKnown RBP12.62□□□□□ -0.39
RPL28-202ENST00000426763 ZNF768Q9H5H4 540 aaKnown RBP12.62□□□□□ -0.39
RPL28-202ENST00000426763 SLC25A19Q9HC21 320 aa12.62□□□□□ -0.39
RPL28-202ENST00000426763 TREM1Q9NP99 234 aa12.62□□□□□ -0.39
RPL28-202ENST00000426763 RDH8Q9NYR8 311 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms