RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 CLDN23Q96B33 292 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 NXPE2Q96DL1 559 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 CITED4Q96RK1 184 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 GAREM1Q9H706 876 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 MRPL22Q9NWU5 206 aaKnown RBP10.41□□□□□ -0.74
UBR4-207ENST00000425413 MYEF2Q9P2K5 600 aaKnown RBP10.41□□□□□ -0.74
UBR4-207ENST00000425413 OR5V1Q9UGF6 321 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 FLVCR2Q9UPI3 526 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 LY6G6EA0A0G2JKS1 128 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 TEX51A0A1B0GUA7 166 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 A0A1W2PQD3 144 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 MASP2O00187 686 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 TCRBP04435 133 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 HTR2BP41595 481 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 RRAS2P62070 204 aaPredicted RBP10.41□□□□□ -0.74
UBR4-207ENST00000425413 DCDP81605 110 aaKnown RBP10.41□□□□□ -0.74
UBR4-207ENST00000425413 POU3F1Q03052 451 aaPredicted RBP10.41□□□□□ -0.74
UBR4-207ENST00000425413 SNTB2Q13425 540 aaKnown RBP10.41□□□□□ -0.74
UBR4-207ENST00000425413 EIF2B1Q14232 305 aaKnown RBP10.41□□□□□ -0.74
UBR4-207ENST00000425413 EMC4Q5J8M3 183 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 UBE2NLQ5JXB2 153 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 KRT77Q7Z794 578 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 GLB1L2Q8IW92 636 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 OR10G3Q8NGC4 313 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 DEDD2Q8WXF8 326 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 COMMD4Q9H0A8 199 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 SLITRK2Q9H156 845 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 PRO3102Q9H379 93 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 ZNF222Q9UK12 451 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 U3KQA8 63 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 PDCD5O14737 125 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 CELA2AP08217 269 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 DPP4P27487 766 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 ACY1Q03154 408 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 MFGE8Q08431 387 aaPredicted RBP10.41□□□□□ -0.74
UBR4-207ENST00000425413 CCDC157Q569K6 752 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 TMEM255AQ5JRV8 349 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 PRAMEF20Q5VT98 475 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 KMT5CQ86Y97 462 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 AKAP1Q92667 903 aaKnown RBP eCLIP10.41□□□□□ -0.74
UBR4-207ENST00000425413 CREB3L1Q96BA8 519 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 SEMA4CQ9C0C4 833 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 DPAGT1Q9H3H5 408 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 SLA2Q9H6Q3 261 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 FBXL3Q9UKT7 428 aa10.41□□□□□ -0.74
UBR4-207ENST00000425413 SLC22A23A1A5C7 686 aa10.4□□□□□ -0.74
UBR4-207ENST00000425413 MEIS3P1A6NDR6 274 aa10.4□□□□□ -0.74
UBR4-207ENST00000425413 GMDSO60547 372 aa10.4□□□□□ -0.74
UBR4-207ENST00000425413 NPIPB7O75200 414 aa10.4□□□□□ -0.74
UBR4-207ENST00000425413 CDK2P24941 298 aa10.4□□□□□ -0.74
UBR4-207ENST00000425413 ERP29P30040 261 aaKnown RBP10.4□□□□□ -0.74
UBR4-207ENST00000425413 GZMKP49863 264 aa10.4□□□□□ -0.74
UBR4-207ENST00000425413 GALK2Q01415 458 aa10.4□□□□□ -0.74
UBR4-207ENST00000425413 TMEM69Q5SWH9 247 aa10.4□□□□□ -0.74
UBR4-207ENST00000425413 NFAM1Q8NET5 270 aaPredicted RBP10.4□□□□□ -0.74
UBR4-207ENST00000425413 MS4A3Q96HJ5 214 aa10.4□□□□□ -0.74
UBR4-207ENST00000425413 MED28Q9H204 178 aa10.4□□□□□ -0.74
UBR4-207ENST00000425413 TXNIPQ9H3M7 391 aa10.4□□□□□ -0.74
UBR4-207ENST00000425413 CENPMQ9NSP4 180 aa10.4□□□□□ -0.74
UBR4-207ENST00000425413 SEMA5BQ9P283 1151 aa10.4□□□□□ -0.74
UBR4-207ENST00000425413 CAMK2AQ9UQM7 478 aa10.4□□□□□ -0.74
UBR4-207ENST00000425413 TMA7Q9Y2S6 64 aaKnown RBP10.4□□□□□ -0.74
UBR4-207ENST00000425413 KIF26BQ2KJY2 2108 aa10.4□□□□□ -0.74
UBR4-207ENST00000425413 IGKV1D-43A0A0B4J1Z2 117 aa10.4□□□□□ -0.75
UBR4-207ENST00000425413 OR6C76A6NM76 312 aa10.4□□□□□ -0.75
UBR4-207ENST00000425413 ADAM10O14672 748 aa10.4□□□□□ -0.75
UBR4-207ENST00000425413 KHDRBS3O75525 346 aaKnown RBP10.4□□□□□ -0.75
UBR4-207ENST00000425413 MT-ATP6P00846 226 aa10.4□□□□□ -0.75
UBR4-207ENST00000425413 MMP15P51511 669 aa10.4□□□□□ -0.75
UBR4-207ENST00000425413 PITPNAQ00169 270 aa10.4□□□□□ -0.75
UBR4-207ENST00000425413 TLE3Q04726 772 aa10.4□□□□□ -0.75
UBR4-207ENST00000425413 PUDPQ08623 228 aa10.4□□□□□ -0.75
UBR4-207ENST00000425413 MAB21L1Q13394 359 aa10.4□□□□□ -0.75
UBR4-207ENST00000425413 YOD1Q5VVQ6 348 aaPredicted RBP10.4□□□□□ -0.75
UBR4-207ENST00000425413 LYPD8Q6UX82 237 aa10.4□□□□□ -0.75
UBR4-207ENST00000425413 KCTD20Q7Z5Y7 419 aa10.4□□□□□ -0.75
UBR4-207ENST00000425413 CARFQ8N187 725 aa10.4□□□□□ -0.75
UBR4-207ENST00000425413 PLPP7Q8NBV4 271 aa10.4□□□□□ -0.75
UBR4-207ENST00000425413 ZNF248Q8NDW4 579 aa10.4□□□□□ -0.75
UBR4-207ENST00000425413 OR51D1Q8NGF3 324 aa10.4□□□□□ -0.75
UBR4-207ENST00000425413 ZNF519Q8TB69 540 aa10.4□□□□□ -0.75
UBR4-207ENST00000425413 GPR148Q8TDV2 347 aa10.4□□□□□ -0.75
UBR4-207ENST00000425413 SAP25Q8TEE9 199 aa10.4□□□□□ -0.75
UBR4-207ENST00000425413 SNAPC3Q92966 411 aa10.4□□□□□ -0.75
UBR4-207ENST00000425413 C4orf45Q96LM5 186 aa10.4□□□□□ -0.75
UBR4-207ENST00000425413 ABHD6Q9BV23 337 aa10.4□□□□□ -0.75
UBR4-207ENST00000425413 SMOC1Q9H4F8 434 aa10.4□□□□□ -0.75
UBR4-207ENST00000425413 METTL7AQ9H8H3 244 aa10.4□□□□□ -0.75
UBR4-207ENST00000425413 IGLV1-36A0A0B4J1U3 117 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 A0A1W2PNR3 127 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 TMEM200CA6NKL6 621 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 CENPBD1B2RD01 187 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 NPIPA5E9PKD4 350 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 G3V3Y1 287 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 DXOO77932 396 aaKnown RBP10.39□□□□□ -0.75
UBR4-207ENST00000425413 EFNB2P52799 333 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 LRFN4Q6PJG9 635 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 RABEPKQ7Z6M1 372 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 GPAT4Q86UL3 456 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 PPP1R3BQ86XI6 285 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms