RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 PCDHGB1Q9Y5G3 927 aa10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ARFGEF3Q5TH69 2177 aa10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 PPIAL4EA0A075B759 164 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 PPIAL4CA0A0B4J2A2 164 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 A0A0B4J2E0 115 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 A0A1B0GX12 115 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 CENPBD1B2RD01 187 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 PPIAL4DF5H284 164 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 WNT9BO14905 357 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 POLR3GO15318 223 aaPredicted RBP10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 CLPTM1O96005 669 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 HPRP00739 348 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 IGHV3-13P01766 116 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 IGHV2-5P01817 119 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 NUDT7P0C024 238 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 PPIAL4FP0DN26 164 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ARAFP10398 606 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 MTNR1AP48039 350 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 GDI2P50395 445 aaKnown RBP10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 CDH12P55289 794 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 UBA52P62987 128 aaKnown RBP10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 IL13RA1P78552 427 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 NPTX1Q15818 432 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 GTDC1Q4AE62 458 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 PRR31Q5SQ13 230 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 WDR93Q6P2C0 686 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 MREGQ8N565 214 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 SPICQ8N5J4 248 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 OR4K5Q8NGD3 323 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 RASSF5Q8WWW0 418 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 MPP4Q96JB8 637 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 MAGEB18Q96M61 343 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 MS4A7Q9GZW8 240 aaPredicted RBP10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 PAIP1Q9H074 479 aaKnown RBP10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 NANOGQ9H9S0 305 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ELOVL3Q9HB03 270 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 NUP50Q9UKX7 468 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 PPIAL4AQ9Y536 164 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 AUP1Q9Y679 476 aa10.46□□□□□ -0.73
HLA-DQB3-203ENST00000425319 IGKV1D-42A0A075B6H8 117 aa10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 BLOC1S5-TXNDC5H3BN57 136 aa10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 SURF4O15260 269 aa10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 SPRY3O43610 288 aa10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 CHP2O43745 196 aa10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 NCR1O76036 304 aa10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 CH25HO95992 272 aa10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 CCL2P13500 99 aa10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 TNFRSF1AP19438 455 aa10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 PRTN3P24158 256 aa10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 HTR2AP28223 471 aa10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 IFNA8P32881 189 aa10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 DAP3P51398 398 aaKnown RBP10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 LCN2P80188 198 aa10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 BAMBIQ13145 260 aa10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 SLC2A7Q6PXP3 512 aa10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 NANOGNBQ7Z5D8 188 aa10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 SLC30A8Q8IWU4 369 aa10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 LRRC18Q8N456 261 aa10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 FNDC8Q8TC99 324 aa10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 MAELQ96JY0 434 aaKnown RBP10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 MOGAT1Q96PD6 335 aa10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 RBP7Q96R05 134 aa10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 RABEP2Q9H5N1 569 aa10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 TMEM38AQ9H6F2 299 aa10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 SIAEQ9HAT2 523 aa10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 SLCO1B3Q9NPD5 702 aa10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 TCF7L2Q9NQB0 619 aa10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 ZNF229Q9UJW7 825 aa10.45□□□□□ -0.74
HLA-DQB3-203ENST00000425319 TMPRSS2O15393 492 aa10.44□□□□□ -0.74
HLA-DQB3-203ENST00000425319 TPST1O60507 370 aa10.44□□□□□ -0.74
HLA-DQB3-203ENST00000425319 CRYBA1P05813 215 aa10.44□□□□□ -0.74
HLA-DQB3-203ENST00000425319 SBK2P0C263 348 aa10.44□□□□□ -0.74
HLA-DQB3-203ENST00000425319 CD247P20963 164 aa10.44□□□□□ -0.74
HLA-DQB3-203ENST00000425319 TUBG1P23258 451 aa10.44□□□□□ -0.74
HLA-DQB3-203ENST00000425319 STOMP27105 288 aa10.44□□□□□ -0.74
HLA-DQB3-203ENST00000425319 PCBD1P61457 104 aa10.44□□□□□ -0.74
HLA-DQB3-203ENST00000425319 SGCAQ16586 387 aa10.44□□□□□ -0.74
HLA-DQB3-203ENST00000425319 MSMPQ1L6U9 139 aa10.44□□□□□ -0.74
HLA-DQB3-203ENST00000425319 INTS11Q5TA45 600 aaKnown RBP10.44□□□□□ -0.74
HLA-DQB3-203ENST00000425319 LRFN4Q6PJG9 635 aa10.44□□□□□ -0.74
HLA-DQB3-203ENST00000425319 WDFY1Q8IWB7 410 aa10.44□□□□□ -0.74
HLA-DQB3-203ENST00000425319 C11orf65Q8NCR3 313 aa10.44□□□□□ -0.74
HLA-DQB3-203ENST00000425319 MCHR2Q969V1 340 aa10.44□□□□□ -0.74
HLA-DQB3-203ENST00000425319 SPDL1Q96EA4 605 aa10.44□□□□□ -0.74
HLA-DQB3-203ENST00000425319 TUBG2Q9NRH3 451 aa10.44□□□□□ -0.74
HLA-DQB3-203ENST00000425319 PLEK2Q9NYT0 353 aa10.44□□□□□ -0.74
HLA-DQB3-203ENST00000425319 ZNF224Q9NZL3 707 aa10.44□□□□□ -0.74
HLA-DQB3-203ENST00000425319 TMEM120BA0PK00 339 aa10.43□□□□□ -0.74
HLA-DQB3-203ENST00000425319 TRAPPC13A5PLN9 417 aa10.43□□□□□ -0.74
HLA-DQB3-203ENST00000425319 SNNO75324 88 aaPredicted RBP10.43□□□□□ -0.74
HLA-DQB3-203ENST00000425319 TGDSO95455 350 aa10.43□□□□□ -0.74
HLA-DQB3-203ENST00000425319 AVPP01185 164 aa10.43□□□□□ -0.74
HLA-DQB3-203ENST00000425319 GPX2P18283 190 aa10.43□□□□□ -0.74
HLA-DQB3-203ENST00000425319 GSTM3P21266 225 aa10.43□□□□□ -0.74
HLA-DQB3-203ENST00000425319 CPT2P23786 658 aa10.43□□□□□ -0.74
HLA-DQB3-203ENST00000425319 AQP1P29972 269 aa10.43□□□□□ -0.74
HLA-DQB3-203ENST00000425319 ZNF74Q16587 644 aa10.43□□□□□ -0.74
HLA-DQB3-203ENST00000425319 CYP51A1Q16850 503 aa10.43□□□□□ -0.74
HLA-DQB3-203ENST00000425319 ENTPD8Q5MY95 495 aa10.43□□□□□ -0.74
HLA-DQB3-203ENST00000425319 THEM4Q5T1C6 240 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms