RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 LANCL2Q9NS86 450 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 OCIAD1Q9NX40 245 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 SLCO1C1Q9NYB5 712 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 COPZ2Q9P299 210 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 KLK11Q9UBX7 282 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 GTF2A1LQ9UNN4 478 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 OTOGLQ3ZCN5 2332 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 KNTC1P50748 2209 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 RAD1O60671 282 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 AKR7A3O95154 331 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 ASAH2BP0C7U1 165 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 NR0B1P51843 470 aaKnown RBP9.65□□□□□ -0.86
CUX1-205ENST00000425244 SLC25A1P53007 311 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 RPS15P62841 145 aaKnown RBP9.65□□□□□ -0.86
CUX1-205ENST00000425244 ZNF117Q03924 483 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 ALKBH1Q13686 389 aaKnown RBP9.65□□□□□ -0.86
CUX1-205ENST00000425244 GSG1Q2KHT4 349 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 IGSF11Q5DX21 431 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 TMEM255AQ5JRV8 349 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 HLA-DQA1Q5Y7H0 255 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 PM20D2Q8IYS1 436 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 OR2T4Q8NH00 348 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 OR10AC1Q8NH08 325 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 NSMAFQ92636 917 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 RNF166Q96A37 237 aaPredicted RBP9.65□□□□□ -0.86
CUX1-205ENST00000425244 ZNF501Q96CX3 271 aaPredicted RBP9.65□□□□□ -0.86
CUX1-205ENST00000425244 LCORQ96JN0 433 aaPredicted RBP9.65□□□□□ -0.86
CUX1-205ENST00000425244 C20orf85Q9H1P6 137 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 FRRS1LQ9P0K9 344 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 PCP4L1A6NKN8 68 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 H0YIG0 161 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 UPK3AO75631 287 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 TOXO94900 526 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 RENP00797 406 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 CD1AP06126 327 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 PNLIPP16233 465 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 CXCR1P25024 350 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 DPP4P27487 766 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 Q499Y3 187 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 ZNF684Q5T5D7 378 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 ARHGAP40Q5TG30 622 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 SLC6A19Q695T7 634 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 FIP1L1Q6UN15 594 aaKnown RBP9.64□□□□□ -0.87
CUX1-205ENST00000425244 STAC2Q6ZMT1 411 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 CREB3L2Q70SY1 520 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 BTN2A1Q7KYR7 527 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 PRSS42Q7Z5A4 293 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 OR11H4Q8NGC9 324 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 PHYHIPQ92561 330 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 OMA1Q96E52 524 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 S100A16Q96FQ6 103 aaKnown RBP9.64□□□□□ -0.87
CUX1-205ENST00000425244 SLC46A1Q96NT5 459 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 EMC7Q9NPA0 242 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 OR5V1Q9UGF6 321 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 DCHS1Q96JQ0 3298 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 ZNF292O60281 2723 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 KMT2EQ8IZD2 1858 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 LOC400499M0QZD8 3231 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 ANXA2P2A6NMY6 339 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 SHOXO15266 292 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 GSTZ1O43708 216 aaPredicted RBP9.64□□□□□ -0.87
CUX1-205ENST00000425244 KRT33AO76009 404 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 WISP1O95388 367 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 ANXA2P07355 339 aaKnown RBP9.64□□□□□ -0.87
CUX1-205ENST00000425244 ICAM2P13598 275 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 UQCRC1P31930 480 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 DUSP3P51452 185 aaPredicted RBP9.64□□□□□ -0.87
CUX1-205ENST00000425244 CCR9P51686 369 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 SHEQ5VZ18 495 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 CD276Q5ZPR3 534 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 SLC35D2Q76EJ3 337 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 SLC38A9Q8NBW4 561 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 OR51A4Q8NGJ6 313 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 OR56B4Q8NH76 319 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 ZNF285Q96NJ3 590 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 EDEM2Q9BV94 578 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 NUDT9Q9BW91 350 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 NARFLQ9H6Q4 476 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 HRASLSQ9HDD0 168 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 ZFP64Q9NPA5 681 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 KLHL9Q9P2J3 617 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 MOKQ9UQ07 419 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 SLC6A5Q9Y345 797 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 PCDHGA5Q9Y5G8 931 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 FER1L5A0AVI2 2057 aa9.64□□□□□ -0.87
CUX1-205ENST00000425244 D6RAR5 112 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 H3BMH7 237 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 XKRYO14609 159 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 GPR171O14626 319 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 CDX4O14627 284 aaPredicted RBP9.63□□□□□ -0.87
CUX1-205ENST00000425244 HPXP02790 462 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 FCER2P06734 321 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 TMIGD3P0DMS9 266 aaPredicted RBP9.63□□□□□ -0.87
CUX1-205ENST00000425244 ADRA2CP18825 462 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 CDK2P24941 298 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 VEGFCP49767 419 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 PLCXD2Q0VAA5 305 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 BIKQ13323 160 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 NSDHLQ15738 373 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 PLA2G2CQ5R387 149 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms