RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 TMEM53Q6P2H8 277 aa7.42□□□□□ -1.22
TRIM39-206ENST00000420746 CALHM3Q86XJ0 350 aa7.42□□□□□ -1.22
TRIM39-206ENST00000420746 ZNF440Q8IYI8 595 aa7.42□□□□□ -1.22
TRIM39-206ENST00000420746 SLC22A24Q8N4F4 322 aa7.42□□□□□ -1.22
TRIM39-206ENST00000420746 ADPRHL1Q8NDY3 354 aa7.42□□□□□ -1.22
TRIM39-206ENST00000420746 FGFBP3Q8TAT2 258 aa7.42□□□□□ -1.22
TRIM39-206ENST00000420746 KLF14Q8TD94 323 aaPredicted RBP7.42□□□□□ -1.22
TRIM39-206ENST00000420746 CDADC1Q9BWV3 514 aa7.42□□□□□ -1.22
TRIM39-206ENST00000420746 ZMAT5Q9UDW3 170 aaKnown RBP7.42□□□□□ -1.22
TRIM39-206ENST00000420746 IL19Q9UHD0 177 aa7.42□□□□□ -1.22
TRIM39-206ENST00000420746 TMED5Q9Y3A6 229 aa7.42□□□□□ -1.22
TRIM39-206ENST00000420746 STARD9Q9P2P6 4700 aa7.42□□□□□ -1.22
TRIM39-206ENST00000420746 IQCMA0A1B0GVH7 501 aa7.41□□□□□ -1.22
TRIM39-206ENST00000420746 NPHS1O60500 1241 aa7.41□□□□□ -1.22
TRIM39-206ENST00000420746 FARS2O95363 451 aaKnown RBP7.41□□□□□ -1.22
TRIM39-206ENST00000420746 PATE4P0C8F1 98 aa7.41□□□□□ -1.22
TRIM39-206ENST00000420746 VSIG10L2P0DP72 767 aa7.41□□□□□ -1.22
TRIM39-206ENST00000420746 CD28P10747 220 aa7.41□□□□□ -1.22
TRIM39-206ENST00000420746 TAC1P20366 129 aa7.41□□□□□ -1.22
TRIM39-206ENST00000420746 SLC6A2P23975 617 aa7.41□□□□□ -1.22
TRIM39-206ENST00000420746 ARRB2P32121 409 aa7.41□□□□□ -1.22
TRIM39-206ENST00000420746 RPL4P36578 427 aaKnown RBP7.41□□□□□ -1.22
TRIM39-206ENST00000420746 HPCAL1P37235 193 aa7.41□□□□□ -1.22
TRIM39-206ENST00000420746 RPS26P62854 115 aaKnown RBP7.41□□□□□ -1.22
TRIM39-206ENST00000420746 PLP2Q04941 152 aa7.41□□□□□ -1.22
TRIM39-206ENST00000420746 BNIP2Q12982 314 aa7.41□□□□□ -1.22
TRIM39-206ENST00000420746 HNRNPA0Q13151 305 aaKnown RBP7.41□□□□□ -1.22
TRIM39-206ENST00000420746 SLC36A2Q495M3 483 aa7.41□□□□□ -1.22
TRIM39-206ENST00000420746 MTX3Q5HYI7 312 aa7.41□□□□□ -1.22
TRIM39-206ENST00000420746 TEX35Q5T0J7 233 aa7.41□□□□□ -1.22
TRIM39-206ENST00000420746 WBP2NLQ6ICG8 309 aa7.41□□□□□ -1.22
TRIM39-206ENST00000420746 ZNF841Q6ZN19 808 aa7.41□□□□□ -1.22
TRIM39-206ENST00000420746 OLIG3Q7RTU3 272 aa7.41□□□□□ -1.22
TRIM39-206ENST00000420746 PNLDC1Q8NA58 520 aaKnown RBP7.41□□□□□ -1.22
TRIM39-206ENST00000420746 WIPF2Q8TF74 440 aaPredicted RBP7.41□□□□□ -1.22
TRIM39-206ENST00000420746 LHX4Q969G2 390 aa7.41□□□□□ -1.22
TRIM39-206ENST00000420746 L3HYPDHQ96EM0 354 aa7.41□□□□□ -1.22
TRIM39-206ENST00000420746 OSBPL9Q96SU4 736 aa7.41□□□□□ -1.22
TRIM39-206ENST00000420746 CITED2Q99967 270 aaPredicted RBP7.41□□□□□ -1.22
TRIM39-206ENST00000420746 TMEM246Q9BRR3 403 aa7.41□□□□□ -1.22
TRIM39-206ENST00000420746 PTDSS2Q9BVG9 487 aa7.41□□□□□ -1.22
TRIM39-206ENST00000420746 SIRPDQ9H106 197 aa7.41□□□□□ -1.22
TRIM39-206ENST00000420746 RNF121Q9H920 327 aa7.41□□□□□ -1.22
TRIM39-206ENST00000420746 MSL2Q9HCI7 577 aa7.41□□□□□ -1.22
TRIM39-206ENST00000420746 RAB18Q9NP72 206 aa7.41□□□□□ -1.22
TRIM39-206ENST00000420746 ATAD3AQ9NVI7 634 aa7.41□□□□□ -1.22
TRIM39-206ENST00000420746 HUWE1Q7Z6Z7 4374 aaKnown RBP7.41□□□□□ -1.22
TRIM39-206ENST00000420746 OR2T1O43869 369 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 ICMTO60725 284 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 C6orf47O95873 294 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 LHBP01229 141 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 OPN1SWP03999 348 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 IFNW1P05000 195 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 LAMP1P11279 417 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 AHCYP23526 432 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 APLNRP35414 380 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 ANXA11P50995 505 aaKnown RBP7.4□□□□□ -1.22
TRIM39-206ENST00000420746 FUT5Q11128 374 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 GNA13Q14344 377 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 ZNF181Q2M3W8 571 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 C11orf91Q3C1V1 193 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 ZBTB37Q5TC79 503 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 CARD17Q5XLA6 110 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 METAP1DQ6UB28 335 aaPredicted RBP7.4□□□□□ -1.22
TRIM39-206ENST00000420746 C5orf46Q6UWT4 87 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 DCDC5Q6ZRR9 648 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 RNF165Q6ZSG1 346 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 H1FNTQ75WM6 255 aaPredicted RBP7.4□□□□□ -1.22
TRIM39-206ENST00000420746 C6orf120Q7Z4R8 191 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 LSRQ86X29 649 aaPredicted RBP7.4□□□□□ -1.22
TRIM39-206ENST00000420746 VRK2Q86Y07 508 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 SLC22A9Q8IVM8 553 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 UEVLDQ8IX04 471 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 SDR9C7Q8NEX9 313 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 OR6N1Q8NGY5 312 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 OR5AK3PQ8NH89 298 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 CLHC1Q8NHS4 586 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 PPP1R35Q8TAP8 253 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 SLC25A40Q8TBP6 338 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 ROPN1LQ96C74 230 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 SLC25A36Q96CQ1 311 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 CLPTM1LQ96KA5 538 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 SLC35G5Q96KT7 338 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 TRIM31Q9BZY9 425 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 OR2J1Q9GZK6 312 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 GCM1Q9NP62 436 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 MID1IP1Q9NPA3 183 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 TMEM38BQ9NVV0 291 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 EIF3KQ9UBQ5 218 aaKnown RBP7.4□□□□□ -1.22
TRIM39-206ENST00000420746 MAB21L2Q9Y586 359 aa7.4□□□□□ -1.22
TRIM39-206ENST00000420746 M0R082 166 aa7.39□□□□□ -1.23
TRIM39-206ENST00000420746 SLC28A1O00337 649 aa7.39□□□□□ -1.23
TRIM39-206ENST00000420746 NEFHP12036 1026 aa7.39□□□□□ -1.23
TRIM39-206ENST00000420746 RPS4Y1P22090 263 aaKnown RBP7.39□□□□□ -1.23
TRIM39-206ENST00000420746 ATP5F1P24539 256 aaPredicted RBP7.39□□□□□ -1.23
TRIM39-206ENST00000420746 HOXD3P31249 432 aaPredicted RBP7.39□□□□□ -1.23
TRIM39-206ENST00000420746 CRATP43155 626 aa7.39□□□□□ -1.23
TRIM39-206ENST00000420746 RPS5P46782 204 aaKnown RBP7.39□□□□□ -1.23
TRIM39-206ENST00000420746 PRKAA2P54646 552 aa7.39□□□□□ -1.23
TRIM39-206ENST00000420746 NAA20P61599 178 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms