RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 NCALDP61601 193 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 DEFA6Q01524 100 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 FADDQ13158 208 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 SCARB2Q14108 478 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 ZNF74Q16587 644 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 KLF17Q5JT82 389 aaPredicted RBP10.91□□□□□ -0.66
LINC00339-203ENST00000420503 REP15Q6BDI9 236 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 REEP3Q6NUK4 255 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 MSANTD1Q6ZTZ1 278 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 PIWIL3Q7Z3Z3 882 aaKnown RBP10.91□□□□□ -0.66
LINC00339-203ENST00000420503 DEFB108BQ8NET1 73 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 OR6T1Q8NGN1 323 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 OR6S1Q8NH40 331 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 OR6X1Q8NH79 312 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 NANPQ8TBE9 248 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 IPCEF1Q8WWN9 437 aaPredicted RBP10.91□□□□□ -0.66
LINC00339-203ENST00000420503 CCL17Q92583 94 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 LRRC58Q96CX6 371 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 EPYCQ99645 322 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 GAL3ST1Q99999 423 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 RNF121Q9H920 327 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 SAP30LQ9HAJ7 183 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 TMEM27Q9HBJ8 222 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 NPHS2Q9NP85 383 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 TCF7L2Q9NQB0 619 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 THUMPD1Q9NXG2 353 aaKnown RBP10.91□□□□□ -0.66
LINC00339-203ENST00000420503 ZNF69Q9UC07 566 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 LEF1Q9UJU2 399 aaPredicted RBP10.91□□□□□ -0.66
LINC00339-203ENST00000420503 PRDM4Q9UKN5 801 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 IGHV3OR16-10A0A075B7F0 116 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 ISPDA4D126 451 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 CLDN25C9JDP6 229 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 MFN2O95140 757 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 SLC2A10O95528 541 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 BCL10O95999 233 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 HKR1P10072 659 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 CCNOP22674 350 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 LSP1P33241 339 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 LIMS1P48059 325 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 UCP2P55851 309 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 FMODQ06828 376 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 SELPLGQ14242 412 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 DUSP7Q16829 419 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 TUSC1Q2TAM9 212 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 PDLIM3Q53GG5 364 aaPredicted RBP10.9□□□□□ -0.66
LINC00339-203ENST00000420503 THEM4Q5T1C6 240 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 LRIF1Q5T3J3 769 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 LINC00114Q6XXX2 140 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 RFPL4BQ6ZWI9 263 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 GOLGA6L1Q8N7Z2 621 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 SYT14Q8NB59 555 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 OR1J1Q8NGS3 322 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 AKR7LQ8NHP1 331 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 VANGL1Q8TAA9 524 aaPredicted RBP10.9□□□□□ -0.66
LINC00339-203ENST00000420503 ZNF519Q8TB69 540 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 SNX33Q8WV41 574 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 ZNF566Q969W8 418 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 RAB39BQ96DA2 213 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 JMJD8Q96S16 334 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 MCHR1Q99705 422 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 ARHGDIGQ99819 225 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 TMEM43Q9BTV4 400 aa10.9□□□□□ -0.66
LINC00339-203ENST00000420503 LOC100509620A0A075B734 347 aa10.89□□□□□ -0.67
LINC00339-203ENST00000420503 TRAPPC2LH3BP13 241 aa10.89□□□□□ -0.67
LINC00339-203ENST00000420503 RNF13O43567 381 aa10.89□□□□□ -0.67
LINC00339-203ENST00000420503 UBOX5O94941 541 aa10.89□□□□□ -0.67
LINC00339-203ENST00000420503 F13BP05160 661 aa10.89□□□□□ -0.67
LINC00339-203ENST00000420503 ZNF81P51508 661 aa10.89□□□□□ -0.67
LINC00339-203ENST00000420503 MMP15P51511 669 aa10.89□□□□□ -0.67
LINC00339-203ENST00000420503 SRSF4Q08170 494 aaKnown RBP10.89□□□□□ -0.67
LINC00339-203ENST00000420503 TBC1D28Q2M2D7 210 aa10.89□□□□□ -0.67
LINC00339-203ENST00000420503 PABPC1L2AQ5JQF8 200 aa10.89□□□□□ -0.67
LINC00339-203ENST00000420503 SLC16A14Q7RTX9 510 aa10.89□□□□□ -0.67
LINC00339-203ENST00000420503 PTOV1Q86YD1 416 aa10.89□□□□□ -0.67
LINC00339-203ENST00000420503 ARMC8Q8IUR7 673 aa10.89□□□□□ -0.67
LINC00339-203ENST00000420503 KIRREL3Q8IZU9 778 aa10.89□□□□□ -0.67
LINC00339-203ENST00000420503 CLDN22Q8N7P3 220 aa10.89□□□□□ -0.67
LINC00339-203ENST00000420503 RBM15BQ8NDT2 890 aaKnown RBP10.89□□□□□ -0.67
LINC00339-203ENST00000420503 C11orf40Q8WZ69 217 aa10.89□□□□□ -0.67
LINC00339-203ENST00000420503 MCHR2Q969V1 340 aa10.89□□□□□ -0.67
LINC00339-203ENST00000420503 EBF4Q9BQW3 602 aa10.89□□□□□ -0.67
LINC00339-203ENST00000420503 CPPED1Q9BRF8 314 aaPredicted RBP10.89□□□□□ -0.67
LINC00339-203ENST00000420503 POFUT1Q9H488 388 aa10.89□□□□□ -0.67
LINC00339-203ENST00000420503 RAD21L1Q9H4I0 556 aa10.89□□□□□ -0.67
LINC00339-203ENST00000420503 DENND2DQ9H6A0 471 aaPredicted RBP10.89□□□□□ -0.67
LINC00339-203ENST00000420503 UNKLQ9H9P5 680 aaKnown RBP10.89□□□□□ -0.67
LINC00339-203ENST00000420503 DECR2Q9NUI1 292 aa10.89□□□□□ -0.67
LINC00339-203ENST00000420503 NKIRAS2Q9NYR9 191 aa10.89□□□□□ -0.67
LINC00339-203ENST00000420503 NKIRAS1Q9NYS0 192 aa10.89□□□□□ -0.67
LINC00339-203ENST00000420503 SELENONQ9NZV5 590 aa10.89□□□□□ -0.67
LINC00339-203ENST00000420503 TRIM33Q9UPN9 1127 aa10.89□□□□□ -0.67
LINC00339-203ENST00000420503 UGT2A1Q9Y4X1 527 aa10.89□□□□□ -0.67
LINC00339-203ENST00000420503 MDFIC2A0A1B0GVS7 189 aa10.88□□□□□ -0.67
LINC00339-203ENST00000420503 J3QLI3 93 aa10.88□□□□□ -0.67
LINC00339-203ENST00000420503 MGRN1O60291 552 aa10.88□□□□□ -0.67
LINC00339-203ENST00000420503 SNAP29O95721 258 aa10.88□□□□□ -0.67
LINC00339-203ENST00000420503 MT-ATP6P00846 226 aa10.88□□□□□ -0.67
LINC00339-203ENST00000420503 NGFP01138 241 aa10.88□□□□□ -0.67
LINC00339-203ENST00000420503 IGHV3-13P01766 116 aa10.88□□□□□ -0.67
LINC00339-203ENST00000420503 ANPEPP15144 967 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms