RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 MT-ND2P03891 347 aa12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 CLUP10909 449 aa12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 CTLA4P16410 223 aa12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 CLDN17P56750 224 aa12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 SRYQ05066 204 aa12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 ACSM1Q08AH1 577 aa12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 NSUN5P2Q63ZY6 315 aa12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 KCTD8Q6ZWB6 473 aa12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 SLC16A9Q7RTY1 509 aa12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 FGD2Q7Z6J4 655 aa12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 WDFY1Q8IWB7 410 aa12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 NANOGP1Q8N7R0 232 aa12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 TEX19Q8NA77 164 aa12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 OR9Q1Q8NGQ5 310 aa12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 OR52N1Q8NH53 320 aa12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 FNDC9Q8TBE3 224 aa12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 ZNRF4Q8WWF5 429 aa12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 ROBO4Q8WZ75 1007 aa12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 GMPPAQ96IJ6 420 aaPredicted RBP12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 CNN2Q99439 309 aaKnown RBP12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 ISYNA1Q9NPH2 558 aa12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 GLTPQ9NZD2 209 aa12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 NDUFA13Q9P0J0 144 aa12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 KCNG2Q9UJ96 466 aa12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 ERGIC3Q9Y282 383 aa12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 LSM2Q9Y333 95 aaKnown RBP12.64□□□□□ -0.39
SHMT1P1-201ENST00000419974 RPL36A-HNRNPH2H7BZ11 118 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 SLC16A7O60669 478 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 SS18L1O75177 396 aaPredicted RBP12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 SLC43A1O75387 559 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 AQP8O94778 261 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 CNOT4O95628 575 aaKnown RBP12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 CRHP06850 196 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 ATP6V1B1P15313 513 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 MYL12AP19105 171 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 CLRN1P58418 232 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 GALEQ14376 348 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 EIF2S3LQ2VIR3 472 aaKnown RBP12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 OR2A2Q6IF42 318 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 LRFN4Q6PJG9 635 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 RHOUQ7L0Q8 258 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 GLB1L2Q8IW92 636 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 ZNF485Q8NCK3 441 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 OR51G2Q8NGK0 314 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 HAVCR2Q8TDQ0 301 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 ABHD3Q8WU67 409 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 MCHR2Q969V1 340 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 MUL1Q969V5 352 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 ZFP3Q96NJ6 502 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 TSSK2Q96PF2 358 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 WACQ9BTA9 647 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 EMC6Q9BV81 110 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 MND1Q9BWT6 205 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 SRA1Q9HD15 236 aaKnown RBP12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 ZNF71Q9NQZ8 489 aaPredicted RBP12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 CHCHD3Q9NX63 227 aaKnown RBP12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 CAMK2AQ9UQM7 478 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 ZNF835Q9Y2P0 537 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 CAB39Q9Y376 341 aaPredicted RBP12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 TMEM14AQ9Y6G1 99 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 COMMD3-BMI1R4GMX3 469 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 MYO18BQ8IUG5 2567 aa12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 FLNBO75369 2602 aaKnown RBP12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 ASH1LQ9NR48 2969 aaKnown RBP12.63□□□□□ -0.39
SHMT1P1-201ENST00000419974 A6NHS1 94 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 PHYHO14832 338 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 SERPINI2O75830 405 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 SEC14L2O76054 403 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 WISP2O76076 250 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 GYPBP06028 91 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 ADRA2AP08913 450 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 LIMS3P0CW19 117 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 LIMS4P0CW20 117 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 GAAP10253 952 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 NTF4P34130 210 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 ATP6V1E1P36543 226 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 CSNK1A1P48729 337 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 RPS7P62081 194 aaKnown RBP12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 BDH1Q02338 343 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 CAMK2DQ13557 499 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 ACSF3Q4G176 576 aaPredicted RBP12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 ZNF627Q7L945 461 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 ZNF367Q7RTV3 350 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 AAED1Q7RTV5 226 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 KCTD20Q7Z5Y7 419 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 CDC20BQ86Y33 519 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 SYS1Q8N2H4 156 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 ZNF454Q8N9F8 522 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 SLC26A10Q8NG04 563 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 RELTQ969Z4 430 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 OTULINQ96BN8 352 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 COG8Q96MW5 612 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 TM9SF2Q99805 663 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 ERVK13-1Q9NX77 482 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 UBR5O95071 2799 aaPredicted RBP12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 SMIM31A0A1B0GVY4 71 aa12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 MBD3L4A6NDZ8 208 aaPredicted RBP12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 MBD3L3A6NE82 208 aaPredicted RBP12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 MBD3L5A6NJ08 208 aaPredicted RBP12.62□□□□□ -0.39
SHMT1P1-201ENST00000419974 FIGNL2A6NMB9 653 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms