RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 PFN4Q8NHR9 129 aa8.12□□□□□ -1.11
NUP50-205ENST00000419387 MCHR2Q969V1 340 aa8.12□□□□□ -1.11
NUP50-205ENST00000419387 SH3GL3Q99963 347 aa8.12□□□□□ -1.11
NUP50-205ENST00000419387 REPIN1Q9BWE0 567 aaKnown RBP8.12□□□□□ -1.11
NUP50-205ENST00000419387 TPK1Q9H3S4 243 aa8.12□□□□□ -1.11
NUP50-205ENST00000419387 MS4A5Q9H3V2 200 aa8.12□□□□□ -1.11
NUP50-205ENST00000419387 CHODLQ9H9P2 273 aa8.12□□□□□ -1.11
NUP50-205ENST00000419387 TMEM38BQ9NVV0 291 aa8.12□□□□□ -1.11
NUP50-205ENST00000419387 CMTM6Q9NX76 183 aa8.12□□□□□ -1.11
NUP50-205ENST00000419387 REV1Q9UBZ9 1251 aa8.12□□□□□ -1.11
NUP50-205ENST00000419387 RIMS3Q9UJD0 308 aa8.12□□□□□ -1.11
NUP50-205ENST00000419387 COL6A5A8TX70 2615 aa8.12□□□□□ -1.11
NUP50-205ENST00000419387 ATRQ13535 2644 aa8.12□□□□□ -1.11
NUP50-205ENST00000419387 A0A1W2PRG6 482 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 SLC22A23A1A5C7 686 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 CENPBD1B2RD01 187 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 MCIDASD6RGH6 385 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 LYNX1G3V0Z9 82 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 M0R233 179 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 PHF1O43189 567 aaPredicted RBP8.11□□□□□ -1.11
NUP50-205ENST00000419387 OR7A10O76100 309 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 OR5F1O95221 314 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 F13BP05160 661 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 LYNX1P0DP58 116 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 SRD5A1P18405 259 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 TNFRSF1BP20333 461 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 PRDX6P30041 224 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 THBS2P35442 1172 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 UGT2B15P54855 530 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 CLRN1P58418 232 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 RUNX1T1Q06455 604 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 RPL18Q07020 188 aaKnown RBP8.11□□□□□ -1.11
NUP50-205ENST00000419387 PIN1Q13526 163 aaPredicted RBP8.11□□□□□ -1.11
NUP50-205ENST00000419387 MAPRE2Q15555 327 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 HIST3H3Q16695 136 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 NRN1LQ496H8 165 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 TMEM53Q6P2H8 277 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 HACD2Q6Y1H2 254 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 DEF8Q6ZN54 512 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 SLC16A14Q7RTX9 510 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 DPPA2Q7Z7J5 298 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 LRP11Q86VZ4 500 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 PHC2Q8IXK0 858 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 OR4K5Q8NGD3 323 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 BCAS4Q8TDM0 211 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 TMEM255BQ8WV15 326 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 TMEM239Q8WW34 195 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 LIPHQ8WWY8 451 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 HPS1Q92902 700 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 SGTBQ96EQ0 304 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 LRRC37BQ96QE4 947 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 ZNF347Q96SE7 839 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 SYT3Q9BQG1 590 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 SOX7Q9BT81 388 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 MRPL13Q9BYD1 178 aaKnown RBP8.11□□□□□ -1.11
NUP50-205ENST00000419387 RNF121Q9H920 327 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 INIPQ9NRY2 104 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 GID8Q9NWU2 228 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 SLC7A8Q9UHI5 535 aa8.11□□□□□ -1.11
NUP50-205ENST00000419387 MALRD1Q5VYJ5 2156 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 NME4O00746 187 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 MGRN1O60291 552 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 TRMUO75648 421 aaKnown RBP8.1□□□□□ -1.11
NUP50-205ENST00000419387 PTHP01270 115 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 TSPAN19P0C672 248 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 THRBP10828 461 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 ACADSP16219 412 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 TCN1P20061 433 aaPredicted RBP8.1□□□□□ -1.11
NUP50-205ENST00000419387 HNF1AP20823 631 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 COL8A2P25067 703 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 APEX1P27695 318 aaKnown RBP8.1□□□□□ -1.11
NUP50-205ENST00000419387 IL2RGP31785 369 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 KDELR2P33947 212 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 AQP2P41181 271 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 ALDH3B1P43353 468 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 OR1E2P47887 323 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 DAP3P51398 398 aaKnown RBP8.1□□□□□ -1.11
NUP50-205ENST00000419387 MMP16P51512 607 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 ZNF84P51523 738 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 MYBPC1Q00872 1141 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 KRT72Q14CN4 511 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 SLC36A2Q495M3 483 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 ELFN2Q5R3F8 820 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 UGT2A3Q6UWM9 527 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 IL17RELQ6ZVW7 336 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 HDDC2Q7Z4H3 204 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 LINC01356Q8N9X3 169 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 SYT14Q8NB59 555 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 PCYOX1LQ8NBM8 494 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 SLC30A7Q8NEW0 376 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 NOXO1Q8NFA2 376 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 ASB10Q8WXI3 467 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 RDH5Q92781 318 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 SEPHS2Q99611 448 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 C1orf198Q9H425 327 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 EFCAB1Q9HAE3 211 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 CDH20Q9HBT6 801 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 C20orf141Q9NUB4 165 aa8.1□□□□□ -1.11
NUP50-205ENST00000419387 MYEF2Q9P2K5 600 aaKnown RBP8.1□□□□□ -1.11
NUP50-205ENST00000419387 STX18Q9P2W9 335 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms