RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 PTDSS2Q9BVG9 487 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 NUP210LQ5VU65 1888 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 TEX51A0A1B0GUA7 166 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 UCHL1P09936 223 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 GSTT2BP0CG30 244 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 ACHEP22303 614 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 SCAND1P57086 179 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 MRPS10P82664 201 aaKnown RBP7.54□□□□□ -1.2
USP54-203ENST00000418501 ZNF239Q16600 458 aaKnown RBP7.54□□□□□ -1.2
USP54-203ENST00000418501 AAED1Q7RTV5 226 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 DPY19L4Q7Z388 723 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 MDGA2Q7Z553 956 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 LRRC28Q86X40 367 aaPredicted RBP7.54□□□□□ -1.2
USP54-203ENST00000418501 ZFP41Q8N8Y5 198 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 ZNF511Q8NB15 262 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 OR52N5Q8NH56 324 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 ZNF519Q8TB69 540 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 ABTB1Q969K4 478 aaPredicted RBP7.54□□□□□ -1.2
USP54-203ENST00000418501 ABCB10Q9NRK6 738 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 FOXJ2Q9P0K8 574 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 UGT2A1Q9Y4X1 527 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 OR2M5A3KFT3 312 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 ARGFXA6NJG6 315 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 MTRF1O75570 445 aaKnown RBP7.53□□□□□ -1.2
USP54-203ENST00000418501 NTN1O95631 604 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 DCTDP32321 178 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 FXYD6P3P58550 94 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 IL18Q14116 193 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 SLC17A1Q14916 467 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 BCL2A1Q16548 175 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 SGCAQ16586 387 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 GXYLT1Q4G148 440 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 ZMAT1Q5H9K5 638 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 DMKNQ6E0U4 476 aaPredicted RBP7.53□□□□□ -1.2
USP54-203ENST00000418501 CD200R1LQ6Q8B3 271 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 RHOUQ7L0Q8 258 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 TIPARPQ7Z3E1 657 aaKnown RBP7.53□□□□□ -1.2
USP54-203ENST00000418501 POC5Q8NA72 575 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 GJC3Q8NFK1 279 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 C17orf50Q8WW18 174 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 HDHD2Q9H0R4 259 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 MARCH7Q9H992 704 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 PLEKHA1Q9HB21 404 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 DIABLOQ9NR28 239 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 COMMD3Q9UBI1 195 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 COA3Q9Y2R0 106 aaPredicted RBP7.53□□□□□ -1.2
USP54-203ENST00000418501 ADAM11O75078 769 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 MSR1P21757 451 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 NR4A2P43354 598 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 ZNF85Q03923 595 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 MELKQ14680 651 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 FGF11Q92914 225 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 NKD1Q969G9 470 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 WDFY2Q96P53 400 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 S100A13Q99584 98 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 ETV7Q9Y603 341 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 NINQ8N4C6 2090 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 ZC3H12DA2A288 527 aaKnown RBP7.53□□□□□ -1.2
USP54-203ENST00000418501 ZNF878C9JN71 531 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 FTCDNL1E5RQL4 147 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 ALOX5APP20292 161 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 FAUP35544 74 aaKnown RBP7.53□□□□□ -1.2
USP54-203ENST00000418501 EIF1AXP47813 144 aaKnown RBP7.53□□□□□ -1.2
USP54-203ENST00000418501 LSM6P62312 80 aaKnown RBP7.53□□□□□ -1.2
USP54-203ENST00000418501 RNPS1Q15287 305 aaKnown RBP7.53□□□□□ -1.2
USP54-203ENST00000418501 ZNF433Q8N7K0 673 aaPredicted RBP7.53□□□□□ -1.2
USP54-203ENST00000418501 ENKURQ8TC29 256 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 MFRPQ9BY79 579 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 SLIRPQ9GZT3 109 aaKnown RBP7.53□□□□□ -1.2
USP54-203ENST00000418501 NXF2Q9GZY0 626 aaKnown RBP7.53□□□□□ -1.2
USP54-203ENST00000418501 PCDHB16Q9NRJ7 776 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 FBXL2Q9UKC9 423 aa7.53□□□□□ -1.2
USP54-203ENST00000418501 SPAARA0A1B0GVQ0 90 aa7.52□□□□□ -1.2
USP54-203ENST00000418501 FAM171A2A8MVW0 826 aa7.52□□□□□ -1.2
USP54-203ENST00000418501 TPPPO94811 219 aa7.52□□□□□ -1.2
USP54-203ENST00000418501 AGFG1P52594 562 aaKnown RBP7.52□□□□□ -1.2
USP54-203ENST00000418501 PLAURQ03405 335 aa7.52□□□□□ -1.2
USP54-203ENST00000418501 LIPNQ5VXI9 398 aa7.52□□□□□ -1.2
USP54-203ENST00000418501 LINC00696Q6ZRV3 163 aa7.52□□□□□ -1.2
USP54-203ENST00000418501 ZNF283Q8N7M2 679 aa7.52□□□□□ -1.2
USP54-203ENST00000418501 WDSUB1Q8N9V3 476 aa7.52□□□□□ -1.2
USP54-203ENST00000418501 OR2M7Q8NG81 312 aa7.52□□□□□ -1.2
USP54-203ENST00000418501 S100A16Q96FQ6 103 aaKnown RBP7.52□□□□□ -1.2
USP54-203ENST00000418501 GLRX2Q9NS18 164 aa7.52□□□□□ -1.2
USP54-203ENST00000418501 UPB1Q9UBR1 384 aa7.52□□□□□ -1.2
USP54-203ENST00000418501 R4GMQ9 66 aa7.52□□□□□ -1.2
USP54-203ENST00000418501 TMEM200CA6NKL6 621 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 H7C1C5 153 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 TFECO14948 347 aaPredicted RBP7.52□□□□□ -1.21
USP54-203ENST00000418501 MRPL33O75394 65 aaKnown RBP7.52□□□□□ -1.21
USP54-203ENST00000418501 PTTG1O95997 202 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 OR8G3PP0DMU2 310 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 LCN6P62502 163 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 LTBQ06643 244 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 MEP1BQ16820 701 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 ZNF362Q5T0B9 420 aaPredicted RBP7.52□□□□□ -1.21
USP54-203ENST00000418501 CARD17Q5XLA6 110 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 BICRALQ6AI39 1079 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 ASB18Q6ZVZ8 466 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 OR6V1Q8N148 313 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms