RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 SPAG17Q6Q759 2223 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 A0A0B4J2A0 478 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 G3V3Y1 287 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 SOCS6O14544 535 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 CELA2BP08218 269 aaPredicted RBP11.74□□□□□ -0.53
SCAF8-203ENST00000417268 ZNF16P17020 682 aaPredicted RBP11.74□□□□□ -0.53
SCAF8-203ENST00000417268 CCR9P51686 369 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 POU3F1Q03052 451 aaPredicted RBP11.74□□□□□ -0.53
SCAF8-203ENST00000417268 MEF2DQ14814 521 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 AANATQ16613 207 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 ARHGAP11BQ3KRB8 267 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 AWAT2Q6E213 333 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 NLRC3Q7RTR2 1065 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 ZNF679Q8IYX0 411 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 WDR34Q96EX3 536 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 OPALINQ96PE5 141 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 SHPKQ9UHJ6 478 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 ZNF223Q9UK11 482 aaPredicted RBP11.74□□□□□ -0.53
SCAF8-203ENST00000417268 TMED7-TICAM2A0A0A6YYA0 188 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 ADRB1P08588 477 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 CBR1P16152 277 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 GABRB1P18505 474 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 CLDN20P56880 219 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 IHHQ14623 411 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 BATFQ16520 125 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 SYT14P1Q58G82 188 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 ZNF322Q6U7Q0 402 aaPredicted RBP11.74□□□□□ -0.53
SCAF8-203ENST00000417268 ZSCAN4Q8NAM6 433 aaPredicted RBP11.74□□□□□ -0.53
SCAF8-203ENST00000417268 CSNK2A3Q8NEV1 391 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 OR6T1Q8NGN1 323 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 C2CD4CQ8TF44 421 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 MARC2Q969Z3 335 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 KATNB1Q9BVA0 655 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 MED17Q9NVC6 651 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 TMED7Q9Y3B3 224 aa11.74□□□□□ -0.53
SCAF8-203ENST00000417268 A0A0A6YYD5 115 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 IGHV5-51A0A0C4DH38 117 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 RAB19A4D1S5 217 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 WDPCPO95876 746 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 IGHG1P01857 330 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 THBS1P07996 1170 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 SLC2A5P22732 501 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 CDK2P24941 298 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 RPL22L1Q6P5R6 122 aaKnown RBP11.73□□□□□ -0.53
SCAF8-203ENST00000417268 MBOAT2Q6ZWT7 520 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 C8orf44Q96CB5 159 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 C12orf57Q99622 126 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 PRDM7Q9NQW5 492 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 ACER3Q9NUN7 267 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 LRFN1Q9P244 771 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 GPRIN2O60269 458 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 CTSVO60911 334 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 ATP1B1P05026 303 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 CAV2P51636 162 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 SLC35A1P78382 337 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 DMWDQ09019 674 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 LIX1LQ8IVB5 337 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 OR4D9Q8NGE8 314 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 CNRIP1Q96F85 164 aaPredicted RBP11.73□□□□□ -0.53
SCAF8-203ENST00000417268 SLC35A4Q96G79 324 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 TRAV36DV7A0A075B6V5 113 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 HMGN4O00479 90 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 TOX3O15405 576 aaPredicted RBP11.73□□□□□ -0.53
SCAF8-203ENST00000417268 TNFSF14O43557 240 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 IFNA10P01566 189 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 IFNA4P05014 189 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 AKR1C2P52895 323 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 AKR1C1Q04828 323 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 H3F3CQ6NXT2 135 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 MARCH3Q86UD3 253 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 TMEM200AQ86VY9 491 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 WDR5BQ86VZ2 330 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 SIRT6Q8N6T7 355 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 OR2I1PQ8NGU4 316 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 C16orf52Q8NHV5 167 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 SPTSSAQ969W0 71 aa11.73□□□□□ -0.53
SCAF8-203ENST00000417268 TMEM129A0AVI4 362 aa11.72□□□□□ -0.53
SCAF8-203ENST00000417268 P2RX6O15547 441 aa11.72□□□□□ -0.53
SCAF8-203ENST00000417268 SSX4O60224 188 aa11.72□□□□□ -0.53
SCAF8-203ENST00000417268 IFNA1P01562 189 aa11.72□□□□□ -0.53
SCAF8-203ENST00000417268 IGFBP1P08833 259 aaPredicted RBP11.72□□□□□ -0.53
SCAF8-203ENST00000417268 SDHBP21912 280 aa11.72□□□□□ -0.53
SCAF8-203ENST00000417268 SEC61A1P61619 476 aaKnown RBP11.72□□□□□ -0.53
SCAF8-203ENST00000417268 SQSTM1Q13501 440 aa11.72□□□□□ -0.53
SCAF8-203ENST00000417268 EIF2B1Q14232 305 aaKnown RBP11.72□□□□□ -0.53
SCAF8-203ENST00000417268 SSX9Q7RTT3 188 aa11.72□□□□□ -0.53
SCAF8-203ENST00000417268 ZNF709Q8N972 641 aa11.72□□□□□ -0.53
SCAF8-203ENST00000417268 SUMF2Q8NBJ7 301 aa11.72□□□□□ -0.53
SCAF8-203ENST00000417268 OR5T1Q8NG75 326 aa11.72□□□□□ -0.53
SCAF8-203ENST00000417268 OR2A5Q96R48 311 aa11.72□□□□□ -0.53
SCAF8-203ENST00000417268 SMOC1Q9H4F8 434 aa11.72□□□□□ -0.53
SCAF8-203ENST00000417268 ZNF768Q9H5H4 540 aaKnown RBP11.72□□□□□ -0.53
SCAF8-203ENST00000417268 CDH20Q9HBT6 801 aa11.72□□□□□ -0.53
SCAF8-203ENST00000417268 NRIP3Q9NQ35 241 aa11.72□□□□□ -0.53
SCAF8-203ENST00000417268 ZNF281Q9Y2X9 895 aa11.72□□□□□ -0.53
SCAF8-203ENST00000417268 PCDHGA5Q9Y5G8 931 aa11.72□□□□□ -0.53
SCAF8-203ENST00000417268 KCNE1BA0A087WTH5 132 aa11.72□□□□□ -0.53
SCAF8-203ENST00000417268 RAD51DO75771 328 aa11.72□□□□□ -0.53
SCAF8-203ENST00000417268 IGHV4-34P06331 123 aa11.72□□□□□ -0.53
SCAF8-203ENST00000417268 NKG7Q16617 165 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms