RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 LMF1Q96S06 567 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 RCC2Q9P258 522 aaKnown RBP13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 ZNF223Q9UK11 482 aaPredicted RBP13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 ADAM18Q9Y3Q7 739 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 PCDHGA1Q9Y5H4 931 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 TRAV8-7A0A075B6U6 113 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 TSPAN11A1L157 253 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 ZNF729A6NN14 1252 aaPredicted RBP13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 LINC01565O15544 149 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 ALOX12BO75342 701 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 CD8AP01732 235 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 ZNF28P17035 718 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 EIF2S3P41091 472 aaKnown RBP13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 ZNF136P52737 540 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 C10orf91Q5T1B1 145 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 OR10K2Q6IF99 312 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 UNQ9370/PRO34162Q6UXP9 181 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 SSX9Q7RTT3 188 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 CD163Q86VB7 1156 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 ZNF227Q86WZ6 799 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 BAP18Q8IXM2 172 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 SYS1Q8N2H4 156 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 ZNF561Q8N587 486 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 POTEKPQ9BYX7 375 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 ULBP3Q9BZM4 244 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 ATG5Q9H1Y0 275 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 TMEM27Q9HBJ8 222 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 MMP26Q9NRE1 261 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 IER3IP1Q9Y5U9 82 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 MDC1Q14676 2089 aaKnown RBP13.38□□□□□ -0.27
NCKIPSD-204ENST00000416649 GPR37O15354 613 aa13.38□□□□□ -0.27
NCKIPSD-204ENST00000416649 GPRIN2O60269 458 aa13.38□□□□□ -0.27
NCKIPSD-204ENST00000416649 CERS1P27544 350 aa13.38□□□□□ -0.27
NCKIPSD-204ENST00000416649 RPL4P36578 427 aaKnown RBP13.38□□□□□ -0.27
NCKIPSD-204ENST00000416649 ARHGAP40Q5TG30 622 aa13.38□□□□□ -0.27
NCKIPSD-204ENST00000416649 MRPL38Q96DV4 380 aaKnown RBP13.38□□□□□ -0.27
NCKIPSD-204ENST00000416649 LGR4Q9BXB1 951 aa13.38□□□□□ -0.27
NCKIPSD-204ENST00000416649 ZNF350Q9GZX5 532 aa13.38□□□□□ -0.27
NCKIPSD-204ENST00000416649 OR8U8P0C7N1 319 aa13.38□□□□□ -0.27
NCKIPSD-204ENST00000416649 NME2P22392 152 aa13.38□□□□□ -0.27
NCKIPSD-204ENST00000416649 ACTR1AP61163 376 aa13.38□□□□□ -0.27
NCKIPSD-204ENST00000416649 SNRPNP63162 240 aaKnown RBP13.38□□□□□ -0.27
NCKIPSD-204ENST00000416649 MLC1Q15049 377 aa13.38□□□□□ -0.27
NCKIPSD-204ENST00000416649 ATPAF1Q5TC12 328 aaPredicted RBP13.38□□□□□ -0.27
NCKIPSD-204ENST00000416649 PARGQ86W56 976 aa13.38□□□□□ -0.27
NCKIPSD-204ENST00000416649 PIK3IP1Q96FE7 263 aa13.38□□□□□ -0.27
NCKIPSD-204ENST00000416649 AKR1E2Q96JD6 320 aa13.38□□□□□ -0.27
NCKIPSD-204ENST00000416649 NMNAT3Q96T66 252 aa13.38□□□□□ -0.27
NCKIPSD-204ENST00000416649 MFRPQ9BY79 579 aa13.38□□□□□ -0.27
NCKIPSD-204ENST00000416649 ZDHHC5Q9C0B5 715 aa13.38□□□□□ -0.27
NCKIPSD-204ENST00000416649 SEMA6CQ9H3T2 930 aa13.38□□□□□ -0.27
NCKIPSD-204ENST00000416649 ACKR4Q9NPB9 350 aa13.38□□□□□ -0.27
NCKIPSD-204ENST00000416649 PRSS16Q9NQE7 514 aa13.38□□□□□ -0.27
NCKIPSD-204ENST00000416649 UFSP2Q9NUQ7 469 aa13.38□□□□□ -0.27
NCKIPSD-204ENST00000416649 MTCL1Q9Y4B5 1905 aaKnown RBP13.38□□□□□ -0.27
NCKIPSD-204ENST00000416649 A0A1W2PPH5 198 aa13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 TBC1D3BA6NDS4 549 aa13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 M0R036 132 aa13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 FGF16O43320 207 aa13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 CTAG2O75638 210 aa13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 AIFM1O95831 613 aa13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 MRPL2Q5T653 305 aaKnown RBP13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 NKAIN2Q5VXU1 208 aa13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 FAM111BQ6SJ93 734 aa13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 TMEM41AQ96HV5 264 aa13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 GGACTQ9BVM4 153 aa13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 NKX2-4Q9H2Z4 354 aa13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 RHBGQ9H310 441 aa13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 METTL1Q9UBP6 276 aaKnown RBP13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 MAFFQ9ULX9 164 aa13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 CSAG2Q9Y5P2 127 aa13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 TBC1D3EA0A087X179 549 aa13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 RHPN2P1A8MT19 583 aa13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 ITGB2P05107 769 aa13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 POU3F4P49335 361 aa13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 TMEM64Q6YI46 380 aa13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 STX12Q86Y82 276 aa13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 OR2L13Q8N349 312 aa13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 OR4K17Q8NGC6 315 aa13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 OR10AC1Q8NH08 325 aa13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 TFGQ92734 400 aaPredicted RBP13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 NECAB3Q96P71 396 aaPredicted RBP13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 ACTRT3Q9BYD9 372 aa13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 MTIF3Q9H2K0 278 aaKnown RBP13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 IKZF2Q9UKS7 526 aa13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 ETV7Q9Y603 341 aa13.37□□□□□ -0.27
NCKIPSD-204ENST00000416649 A0A0A6YYD5 115 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 RNASEK-C17orf49H0YIS7 233 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 PEX12O00623 359 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 SLC25A4P12235 298 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 ALKBH1Q13686 389 aaKnown RBP13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 VWA2Q5GFL6 755 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 TANGO2Q6ICL3 276 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 CDPF1Q6NVV7 123 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 TMEM205Q6UW68 189 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 BPIFB2Q8N4F0 458 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 C15orf54Q8N8G6 183 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 ZNF511Q8NB15 262 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 CLEC1AQ8NC01 280 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 OR5AK2Q8NH90 309 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms