RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 LRRC30A6NM36 301 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 C21orf140B9A014 251 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 SLC33A1O00400 549 aaPredicted RBP10.91□□□□□ -0.66
PTPRF-205ENST00000414879 TIMM8AO60220 97 aaPredicted RBP10.91□□□□□ -0.66
PTPRF-205ENST00000414879 DOK2O60496 412 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 CTSVO60911 334 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 OPN1LWP04000 364 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 WNT3P56703 355 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 UBE2IP63279 158 aaKnown RBP10.91□□□□□ -0.66
PTPRF-205ENST00000414879 EIF2S3LQ2VIR3 472 aaKnown RBP10.91□□□□□ -0.66
PTPRF-205ENST00000414879 GUSBP11Q6P575 273 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 DCXRQ7Z4W1 244 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 RBM45Q8IUH3 476 aaKnown RBP10.91□□□□□ -0.66
PTPRF-205ENST00000414879 ELMOD2Q8IZ81 293 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 OR1L3Q8NH93 324 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 SLCO4A1Q96BD0 722 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 CCDC120Q96HB5 630 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 EGLN1Q9GZT9 426 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 IKZF5Q9H5V7 419 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 SDK1Q7Z5N4 2213 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 TRIP12Q14669 1992 aaPredicted RBP10.91□□□□□ -0.66
PTPRF-205ENST00000414879 A0A0G2JMP0 313 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 ALG1L2C9J202 215 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 LSSP48449 732 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 RPL18Q07020 188 aaKnown RBP10.91□□□□□ -0.66
PTPRF-205ENST00000414879 ZNF141Q15928 474 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 ZNF793Q6ZN11 406 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 ZNF679Q8IYX0 411 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 LRRC18Q8N456 261 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 SIRT6Q8N6T7 355 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 OR4M2Q8NGB6 313 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 OR2V1Q8NHB1 315 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 RASD2Q96D21 266 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 RAB3CQ96E17 227 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 MBOAT4Q96T53 435 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 NUDT9Q9BW91 350 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 ZNF391Q9UJN7 358 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 PCDHB10Q9UN67 800 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 COA3Q9Y2R0 106 aaPredicted RBP10.91□□□□□ -0.66
PTPRF-205ENST00000414879 PLXNA1Q9UIW2 1896 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 SLC22A23A1A5C7 686 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 HPGDSO60760 199 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 SLC22A5O76082 557 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 FCER2P06734 321 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 CPEP16870 476 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 HMGA2P52926 109 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 RPS25P62851 125 aaKnown RBP10.91□□□□□ -0.66
PTPRF-205ENST00000414879 CXADRP78310 365 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 RBMS2Q15434 407 aaKnown RBP10.91□□□□□ -0.66
PTPRF-205ENST00000414879 PRICKLE4Q2TBC4 344 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 ZNF767PQ75MW2 155 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 FCRLAQ7L513 359 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 VN1R4Q7Z5H5 301 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 EXD3Q8N9H8 876 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 ASCC1Q8N9N2 400 aaKnown RBP10.91□□□□□ -0.66
PTPRF-205ENST00000414879 OR13C9Q8NGT0 318 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 FNDC9Q8TBE3 224 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 M1APQ8TC57 530 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 VN1R1Q9GZP7 353 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 ZNF768Q9H5H4 540 aaKnown RBP10.91□□□□□ -0.66
PTPRF-205ENST00000414879 RHBDD3Q9Y3P4 386 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 A0A1W2PQF6 199 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 TRIM64A6NGJ6 449 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 F5H5P2 479 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 CAPNS1P04632 268 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 ZNF93P35789 620 aaPredicted RBP10.91□□□□□ -0.66
PTPRF-205ENST00000414879 KIR2DL3P43628 341 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 CX3CR1P49238 355 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 SLC25A1P53007 311 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 SEMA6DQ8NFY4 1073 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 RAB33BQ9H082 229 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 GPATCH2Q9NW75 528 aa10.91□□□□□ -0.66
PTPRF-205ENST00000414879 ZNF346Q9UL40 294 aaKnown RBP10.91□□□□□ -0.66
PTPRF-205ENST00000414879 GPR55Q9Y2T6 319 aaPredicted RBP10.91□□□□□ -0.66
PTPRF-205ENST00000414879 A0A1B0GTL3 188 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 A0A1W2PQD3 144 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 ARPC3O15145 178 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 RGS11O94810 467 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 MT-CO2P00403 227 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 HTR2AP28223 471 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 NKPD1Q17RQ9 610 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 ADPRMQ3LIE5 342 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 MRM1Q6IN84 353 aaKnown RBP10.9□□□□□ -0.66
PTPRF-205ENST00000414879 PARP16Q8N5Y8 322 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 ZNF511Q8NB15 262 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 NPRL2Q8WTW4 380 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 C11orf40Q8WZ69 217 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 RGCCQ9H4X1 137 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 LIN7BQ9HAP6 207 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 POLDIP2Q9Y2S7 368 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 TRIP11Q15643 1979 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 LRRC37A2A6NM11 1700 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 IGHV5-51A0A0C4DH38 117 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 ALDOBP05062 364 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 DBHP09172 617 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 CTXN2P0C2S0 81 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 IL2RGP31785 369 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 STARD6P59095 220 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 SPCS2Q15005 226 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 ESPNLQ6ZVH7 1005 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms