RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 OR2M3Q8NG83 312 aa13.8□□□□□ -0.2
LRCH3-202ENST00000414675 LGALS14Q8TCE9 139 aa13.8□□□□□ -0.2
LRCH3-202ENST00000414675 PHYHIPQ92561 330 aa13.8□□□□□ -0.2
LRCH3-202ENST00000414675 NSMAFQ92636 917 aa13.8□□□□□ -0.2
LRCH3-202ENST00000414675 TRIM63Q969Q1 353 aa13.8□□□□□ -0.2
LRCH3-202ENST00000414675 MED29Q9NX70 200 aa13.8□□□□□ -0.2
LRCH3-202ENST00000414675 NXT1Q9UKK6 140 aaKnown RBP13.8□□□□□ -0.2
LRCH3-202ENST00000414675 HS3ST3B1Q9Y662 390 aa13.8□□□□□ -0.2
LRCH3-202ENST00000414675 TMEM14AQ9Y6G1 99 aa13.8□□□□□ -0.2
LRCH3-202ENST00000414675 TRBV5-5A0A0J9YX44 114 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 LIPT2A6NK58 231 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 MASP2O00187 686 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 LYRM1O43325 122 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 ITGA10O75578 1167 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 KLK3P07288 261 aaPredicted RBP13.79□□□□□ -0.2
LRCH3-202ENST00000414675 SYPP08247 313 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 CYC1P08574 325 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 SPARCP09486 303 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 COX6A1P12074 109 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 ZNF41P51814 821 aaPredicted RBP13.79□□□□□ -0.2
LRCH3-202ENST00000414675 CCDC92Q53HC0 331 aaPredicted RBP13.79□□□□□ -0.2
LRCH3-202ENST00000414675 SLC25A53Q5H9E4 307 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 STPG1Q5TH74 334 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 ZNF57Q68EA5 555 aaPredicted RBP13.79□□□□□ -0.2
LRCH3-202ENST00000414675 SLC7A5P1Q8MH63 180 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 DTWD2Q8NBA8 298 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 OR51A4Q8NGJ6 313 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 DDIT4LQ96D03 193 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 IMMP1LQ96LU5 166 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 OR8B4Q96RC9 309 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.79□□□□□ -0.29e-6■■□□□ 11.4
LRCH3-202ENST00000414675 TMEM185BQ9H7F4 350 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 ELOVL3Q9HB03 270 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 CHST11Q9NPF2 352 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 ABRACLQ9P1F3 81 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 NUFIP1Q9UHK0 495 aaKnown RBP13.79□□□□□ -0.2
LRCH3-202ENST00000414675 COA3Q9Y2R0 106 aaPredicted RBP13.79□□□□□ -0.2
LRCH3-202ENST00000414675 IGKV1D-43A0A0B4J1Z2 117 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 ADRB1P08588 477 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 MSX1P28360 303 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 POU3F1Q03052 451 aaPredicted RBP13.79□□□□□ -0.2
LRCH3-202ENST00000414675 TLE3Q04726 772 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 NDUFA5Q16718 116 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 Q499Y3 187 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 PRAMEF20Q5VT98 475 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 MDGA2Q7Z553 956 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 ZNF433Q8N7K0 673 aaPredicted RBP13.79□□□□□ -0.2
LRCH3-202ENST00000414675 WDSUB1Q8N9V3 476 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 SLC7A6Q92536 515 aa13.79□□□□□ -0.2
LRCH3-202ENST00000414675 RBFOX1Q9NWB1 397 aaKnown RBP13.79□□□□□ -0.2
LRCH3-202ENST00000414675 CHCHD2Q9Y6H1 151 aaPredicted RBP13.79□□□□□ -0.2
LRCH3-202ENST00000414675 FAM240BA0A1B0GVZ2 78 aa13.78□□□□□ -0.2
LRCH3-202ENST00000414675 SLC43A1O75387 559 aa13.78□□□□□ -0.2
LRCH3-202ENST00000414675 ADRA2CP18825 462 aa13.78□□□□□ -0.2
LRCH3-202ENST00000414675 ADAM8P78325 824 aa13.78□□□□□ -0.2
LRCH3-202ENST00000414675 MYBPHQ13203 477 aa13.78□□□□□ -0.2
LRCH3-202ENST00000414675 SLC17A1Q14916 467 aa13.78□□□□□ -0.2
LRCH3-202ENST00000414675 WDR38Q5JTN6 314 aa13.78□□□□□ -0.2
LRCH3-202ENST00000414675 PPP1R14AQ96A00 147 aa13.78□□□□□ -0.2
LRCH3-202ENST00000414675 MRGPRX4Q96LA9 322 aa13.78□□□□□ -0.2
LRCH3-202ENST00000414675 C4orf45Q96LM5 186 aa13.78□□□□□ -0.2
LRCH3-202ENST00000414675 THAP7Q9BT49 309 aaPredicted RBP13.78□□□□□ -0.2
LRCH3-202ENST00000414675 ZNF700Q9H0M5 742 aa13.78□□□□□ -0.2
LRCH3-202ENST00000414675 HDHD2Q9H0R4 259 aa13.78□□□□□ -0.2
LRCH3-202ENST00000414675 SLC39A1Q9NY26 324 aa13.78□□□□□ -0.2
LRCH3-202ENST00000414675 PCDHGA9Q9Y5G4 932 aaKnown RBP13.78□□□□□ -0.2
LRCH3-202ENST00000414675 NPIPA5E9PKD4 350 aa13.78□□□□□ -0.2
LRCH3-202ENST00000414675 PHYHO14832 338 aa13.78□□□□□ -0.2
LRCH3-202ENST00000414675 EEF1E1O43324 174 aaKnown RBP13.78□□□□□ -0.2
LRCH3-202ENST00000414675 LDOC1O95751 146 aaPredicted RBP13.78□□□□□ -0.2
LRCH3-202ENST00000414675 CLDN12P56749 244 aa13.78□□□□□ -0.2
LRCH3-202ENST00000414675 HSF1Q00613 529 aa13.78□□□□□ -0.2
LRCH3-202ENST00000414675 MRPL28Q13084 256 aaKnown RBP13.78□□□□□ -0.2
LRCH3-202ENST00000414675 MFSD13AQ14CX5 517 aa13.78□□□□□ -0.2
LRCH3-202ENST00000414675 SF3A2Q15428 464 aaKnown RBP13.78□□□□□ -0.2
LRCH3-202ENST00000414675 ASB18Q6ZVZ8 466 aa13.78□□□□□ -0.2
LRCH3-202ENST00000414675 ZNF248Q8NDW4 579 aa13.78□□□□□ -0.2
LRCH3-202ENST00000414675 ZNF671Q8TAW3 534 aa13.78□□□□□ -0.2
LRCH3-202ENST00000414675 HAVCR2Q8TDQ0 301 aa13.78□□□□□ -0.2
LRCH3-202ENST00000414675 ZC3HAV1LQ96H79 300 aaKnown RBP13.78□□□□□ -0.2
LRCH3-202ENST00000414675 KCNK17Q96T54 332 aa13.78□□□□□ -0.2
LRCH3-202ENST00000414675 POTEKPQ9BYX7 375 aa13.78□□□□□ -0.2
LRCH3-202ENST00000414675 NLKQ9UBE8 527 aa13.78□□□□□ -0.2
LRCH3-202ENST00000414675 FBXO4Q9UKT5 387 aa13.78□□□□□ -0.2
LRCH3-202ENST00000414675 SPATA2Q9UM82 520 aa13.78□□□□□ -0.2
LRCH3-202ENST00000414675 NPIPA1Q9UND3 350 aa13.78□□□□□ -0.2
LRCH3-202ENST00000414675 CNTRLQ7Z7A1 2325 aa13.77□□□□□ -0.2
LRCH3-202ENST00000414675 TRAV8-7A0A075B6U6 113 aa13.77□□□□□ -0.21
LRCH3-202ENST00000414675 PMS2P1A4D2B8 440 aa13.77□□□□□ -0.21
LRCH3-202ENST00000414675 IFITM5A6NNB3 132 aa13.77□□□□□ -0.21
LRCH3-202ENST00000414675 C9J4A7 227 aa13.77□□□□□ -0.21
LRCH3-202ENST00000414675 PNPP00491 289 aa13.77□□□□□ -0.21
LRCH3-202ENST00000414675 AGFG1P52594 562 aaKnown RBP13.77□□□□□ -0.21
LRCH3-202ENST00000414675 RNASE12Q5GAN4 147 aaKnown RBP13.77□□□□□ -0.21
LRCH3-202ENST00000414675 PYHIN1Q6K0P9 492 aa13.77□□□□□ -0.21
LRCH3-202ENST00000414675 SLC18B1Q6NT16 456 aa13.77□□□□□ -0.21
LRCH3-202ENST00000414675 STAC2Q6ZMT1 411 aa13.77□□□□□ -0.21
LRCH3-202ENST00000414675 IZUMO1Q8IYV9 350 aa13.77□□□□□ -0.21
LRCH3-202ENST00000414675 ZNF676Q8N7Q3 588 aa13.77□□□□□ -0.21
LRCH3-202ENST00000414675 RFT1Q96AA3 541 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms