RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 APOBEC3AP31941 199 aaPredicted RBP12.81□□□□□ -0.36
CHD1-202ENST00000414220 TTKP33981 857 aa12.81□□□□□ -0.36
CHD1-202ENST00000414220 ZNF133P52736 654 aaPredicted RBP12.81□□□□□ -0.36
CHD1-202ENST00000414220 GALK2Q01415 458 aa12.81□□□□□ -0.36
CHD1-202ENST00000414220 NAAAQ02083 359 aa12.81□□□□□ -0.36
CHD1-202ENST00000414220 RUNX1T1Q06455 604 aa12.81□□□□□ -0.36
CHD1-202ENST00000414220 PIGFQ07326 219 aa12.81□□□□□ -0.36
CHD1-202ENST00000414220 TSPAN31Q12999 210 aa12.81□□□□□ -0.36
CHD1-202ENST00000414220 RFX4Q33E94 735 aa12.81□□□□□ -0.36
CHD1-202ENST00000414220 C1orf94Q6P1W5 598 aa12.81□□□□□ -0.36
CHD1-202ENST00000414220 PGM2L1Q6PCE3 622 aa12.81□□□□□ -0.36
CHD1-202ENST00000414220 ZER1Q7Z7L7 766 aa12.81□□□□□ -0.36
CHD1-202ENST00000414220 ADCK1Q86TW2 530 aa12.81□□□□□ -0.36
CHD1-202ENST00000414220 MUC15Q8N387 334 aa12.81□□□□□ -0.36
CHD1-202ENST00000414220 OR52L1Q8NGH7 329 aa12.81□□□□□ -0.36
CHD1-202ENST00000414220 FANK1Q8TC84 345 aa12.81□□□□□ -0.36
CHD1-202ENST00000414220 NSMAFQ92636 917 aa12.81□□□□□ -0.36
CHD1-202ENST00000414220 NEUROG1Q92886 237 aa12.81□□□□□ -0.36
CHD1-202ENST00000414220 GPX7Q96SL4 187 aaPredicted RBP12.81□□□□□ -0.36
CHD1-202ENST00000414220 FUZQ9BT04 418 aa12.81□□□□□ -0.36
CHD1-202ENST00000414220 CHID1Q9BWS9 393 aa12.81□□□□□ -0.36
CHD1-202ENST00000414220 GRIP2Q9C0E4 1043 aa12.81□□□□□ -0.36
CHD1-202ENST00000414220 LRMDAQ9H2I8 198 aa12.81□□□□□ -0.36
CHD1-202ENST00000414220 C1orf198Q9H425 327 aa12.81□□□□□ -0.36
CHD1-202ENST00000414220 SIAEQ9HAT2 523 aa12.81□□□□□ -0.36
CHD1-202ENST00000414220 CCNB1IP1Q9NPC3 277 aa12.81□□□□□ -0.36
CHD1-202ENST00000414220 NRIP3Q9NQ35 241 aa12.81□□□□□ -0.36
CHD1-202ENST00000414220 FBXO9Q9UK97 447 aaPredicted RBP12.81□□□□□ -0.36
CHD1-202ENST00000414220 LYVE1Q9Y5Y7 322 aa12.81□□□□□ -0.36
CHD1-202ENST00000414220 TEX15Q9BXT5 2789 aa12.81□□□□□ -0.36
CHD1-202ENST00000414220 SPG11Q96JI7 2443 aa12.8□□□□□ -0.36
CHD1-202ENST00000414220 IQCMA0A1B0GVH7 501 aa12.8□□□□□ -0.36
CHD1-202ENST00000414220 E7EQL1 145 aa12.8□□□□□ -0.36
CHD1-202ENST00000414220 ATP6V1G2-DDX39BF2Z307 99 aa12.8□□□□□ -0.36
CHD1-202ENST00000414220 IMPA2O14732 288 aa12.8□□□□□ -0.36
CHD1-202ENST00000414220 CECR9P0C854 216 aa12.8□□□□□ -0.36
CHD1-202ENST00000414220 DANCRP0C864 163 aa12.8□□□□□ -0.36
CHD1-202ENST00000414220 APEHP13798 732 aaKnown RBP12.8□□□□□ -0.36
CHD1-202ENST00000414220 GSTM3P21266 225 aa12.8□□□□□ -0.36
CHD1-202ENST00000414220 NOS3P29474 1203 aa12.8□□□□□ -0.36
CHD1-202ENST00000414220 GIPRP48546 466 aa12.8□□□□□ -0.36
CHD1-202ENST00000414220 ARHGDIAP52565 204 aa12.8□□□□□ -0.36
CHD1-202ENST00000414220 MRPS34P82930 218 aaKnown RBP12.8□□□□□ -0.36
CHD1-202ENST00000414220 TESK1Q15569 626 aa12.8□□□□□ -0.36
CHD1-202ENST00000414220 SGCAQ16586 387 aa12.8□□□□□ -0.36
CHD1-202ENST00000414220 DNM1P34Q6PK57 102 aa12.8□□□□□ -0.36
CHD1-202ENST00000414220 WDFY1Q8IWB7 410 aa12.8□□□□□ -0.36
CHD1-202ENST00000414220 SKA3Q8IX90 412 aa12.8□□□□□ -0.36
CHD1-202ENST00000414220 OR1J2Q8NGS2 313 aa12.8□□□□□ -0.36
CHD1-202ENST00000414220 ZNF519Q8TB69 540 aa12.8□□□□□ -0.36
CHD1-202ENST00000414220 GSX2Q9BZM3 304 aa12.8□□□□□ -0.36
CHD1-202ENST00000414220 SEC61A2Q9H9S3 476 aa12.8□□□□□ -0.36
CHD1-202ENST00000414220 CBLN4Q9NTU7 201 aa12.8□□□□□ -0.36
CHD1-202ENST00000414220 B3GNT2Q9NY97 397 aa12.8□□□□□ -0.36
CHD1-202ENST00000414220 POMPQ9Y244 141 aa12.8□□□□□ -0.36
CHD1-202ENST00000414220 IER3IP1Q9Y5U9 82 aa12.8□□□□□ -0.36
CHD1-202ENST00000414220 PMF1-BGLAPU3KQ54 211 aa12.8□□□□□ -0.36
CHD1-202ENST00000414220 ANKRD17O75179 2603 aaKnown RBP12.79□□□□□ -0.36
CHD1-202ENST00000414220 PRSS37A4D1T9 235 aa12.79□□□□□ -0.36
CHD1-202ENST00000414220 IDH3BO43837 385 aa12.79□□□□□ -0.36
CHD1-202ENST00000414220 SLC2A10O95528 541 aa12.79□□□□□ -0.36
CHD1-202ENST00000414220 RENP00797 406 aa12.79□□□□□ -0.36
CHD1-202ENST00000414220 PCBD1P61457 104 aa12.79□□□□□ -0.36
CHD1-202ENST00000414220 SPOCK1Q08629 439 aa12.79□□□□□ -0.36
CHD1-202ENST00000414220 KRR1Q13601 381 aaKnown RBP12.79□□□□□ -0.36
CHD1-202ENST00000414220 FHL1Q13642 323 aa12.79□□□□□ -0.36
CHD1-202ENST00000414220 MICAQ29983 383 aa12.79□□□□□ -0.36
CHD1-202ENST00000414220 SLC25A47Q6Q0C1 308 aa12.79□□□□□ -0.36
CHD1-202ENST00000414220 PRSS57Q6UWY2 283 aa12.79□□□□□ -0.36
CHD1-202ENST00000414220 CCDC121Q6ZUS5 278 aa12.79□□□□□ -0.36
CHD1-202ENST00000414220 JAZF1Q86VZ6 243 aa12.79□□□□□ -0.36
CHD1-202ENST00000414220 ALDH16A1Q8IZ83 802 aa12.79□□□□□ -0.36
CHD1-202ENST00000414220 LRRC18Q8N456 261 aa12.79□□□□□ -0.36
CHD1-202ENST00000414220 CANT1Q8WVQ1 401 aa12.79□□□□□ -0.36
CHD1-202ENST00000414220 PERPQ96FX8 193 aa12.79□□□□□ -0.36
CHD1-202ENST00000414220 Q96M85 177 aa12.79□□□□□ -0.36
CHD1-202ENST00000414220 ERMAPQ96PL5 475 aaPredicted RBP12.79□□□□□ -0.36
CHD1-202ENST00000414220 SH3GL3Q99963 347 aa12.79□□□□□ -0.36
CHD1-202ENST00000414220 WACQ9BTA9 647 aa12.79□□□□□ -0.36
CHD1-202ENST00000414220 IFT27Q9BW83 186 aa12.79□□□□□ -0.36
CHD1-202ENST00000414220 CADM1Q9BY67 442 aaKnown RBP12.79□□□□□ -0.36
CHD1-202ENST00000414220 OR52D1Q9H346 318 aa12.79□□□□□ -0.36
CHD1-202ENST00000414220 ADAM18Q9Y3Q7 739 aa12.79□□□□□ -0.36
CHD1-202ENST00000414220 U3KQV3 271 aa12.79□□□□□ -0.36
CHD1-202ENST00000414220 TEX13CA0A0J9YWL9 993 aa12.78□□□□□ -0.36
CHD1-202ENST00000414220 A0A1W2PPL8 197 aa12.78□□□□□ -0.36
CHD1-202ENST00000414220 SLC22A23A1A5C7 686 aa12.78□□□□□ -0.36
CHD1-202ENST00000414220 E2F6O75461 281 aa12.78□□□□□ -0.36
CHD1-202ENST00000414220 KHDRBS3O75525 346 aaKnown RBP12.78□□□□□ -0.36
CHD1-202ENST00000414220 CIB2O75838 187 aa12.78□□□□□ -0.36
CHD1-202ENST00000414220 SERPINA5P05154 406 aa12.78□□□□□ -0.36
CHD1-202ENST00000414220 SOD3P08294 240 aa12.78□□□□□ -0.36
CHD1-202ENST00000414220 PAX1P15863 534 aa12.78□□□□□ -0.36
CHD1-202ENST00000414220 CRABP1P29762 137 aa12.78□□□□□ -0.36
CHD1-202ENST00000414220 GSSP48637 474 aa12.78□□□□□ -0.36
CHD1-202ENST00000414220 PTH2RP49190 550 aa12.78□□□□□ -0.36
CHD1-202ENST00000414220 ATP5J2P56134 94 aa12.78□□□□□ -0.36
CHD1-202ENST00000414220 RPS23P62266 143 aaKnown RBP12.78□□□□□ -0.36
CHD1-202ENST00000414220 HSF2Q03933 536 aa12.78□□□□□ -0.36
CHD1-202ENST00000414220 FMODQ06828 376 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms