RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 CDC14CA4D256 554 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 HMSDA8MTL9 139 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 PRSS3P35030 304 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 UBE2IP63279 158 aaKnown RBP13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 ITPRIPL2Q3MIP1 535 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 OR52W1Q6IF63 320 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 MARCH3Q86UD3 253 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 LINC00518Q8N0U6 118 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 GABRG1Q8N1C3 465 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 KDM8Q8N371 416 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 GVQW1Q8N7I0 195 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 OR1S2Q8NGQ3 325 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 CASTOR1Q8WTX7 329 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 FAM3DQ96BQ1 224 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 CTHRC1Q96CG8 243 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 TSPAN32Q96QS1 320 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 LPAR4Q99677 370 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 VRK1Q99986 396 aaPredicted RBP13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 C14orf105Q9NVL8 296 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 ASF1BQ9NVP2 202 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 LOC101059948A0A1B0GTJ6 334 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 TMEM235A6NFC5 223 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 LINC01387J3KSC0 135 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 MFGE8Q08431 387 aaPredicted RBP13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 SPOCK1Q08629 439 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 ZFP82Q8N141 532 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 OR6N1Q8NGY5 312 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 ELOVL3Q9HB03 270 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 HRASLS2Q9NWW9 162 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 PLCL2Q9UPR0 1127 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 MUC22E2RYF6 1773 aaPredicted RBP13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 ASCC3Q8N3C0 2202 aaKnown RBP13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 K7EQS6 105 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 FOXS1O43638 330 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 SULT1B1O43704 296 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 PRAMEF2O60811 474 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 AKAIN1P0CW23 69 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 MAOBP27338 520 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 EGR4Q05215 589 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 RPL18Q07020 188 aaKnown RBP13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 ILF3Q12906 894 aaKnown RBP eCLIP13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 RUNX3Q13761 415 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 ANKRD16Q6P6B7 361 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 TMPPEQ6ZT21 453 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 SLC16A9Q7RTY1 509 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 HSD17B13Q7Z5P4 300 aaPredicted RBP13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 C12orf45Q8N5I9 185 aaPredicted RBP13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 ACBD4Q8NC06 268 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 CAMKVQ8NCB2 501 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 PHOSPHO1Q8TCT1 267 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 FAM46BQ96A09 425 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 SLC25A36Q96CQ1 311 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 CCDC3Q9BQI4 270 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 UTP23Q9BRU9 249 aaKnown RBP13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 NOP16Q9Y3C1 178 aaKnown RBP13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 RTTNQ86VV8 2226 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 A0A087WV62 115 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 TMEM82A0PJX8 343 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 OR5H14A6NHG9 310 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 TUBAL3A6NHL2 446 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 RAB3DO95716 219 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 CT45A8P0DMV1 189 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 CT45A9P0DMV2 189 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 PBX2P40425 430 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 CAPZA1P52907 286 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 C1orf61Q13536 156 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 TOMM34Q15785 309 aaPredicted RBP13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 CT45A2Q5DJT8 189 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 C3orf33Q6P1S2 294 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 OR2W3Q7Z3T1 314 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 BCORP1Q8N888 145 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 CLEC1AQ8NC01 280 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 C2CD4CQ8TF44 421 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 NRSN2Q9GZP1 204 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 BARX1Q9HBU1 254 aaPredicted RBP13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 ZNF275Q9NSD4 429 aaPredicted RBP13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 B9D1Q9UPM9 204 aa13.19□□□□□ -0.3
SEMA3F-202ENST00000413852 TRBV5-5A0A0J9YX44 114 aa13.18□□□□□ -0.3
SEMA3F-202ENST00000413852 CPED1A4D0V7 1026 aa13.18□□□□□ -0.3
SEMA3F-202ENST00000413852 KCNJ13O60928 360 aa13.18□□□□□ -0.3
SEMA3F-202ENST00000413852 TIMP1P01033 207 aa13.18□□□□□ -0.3
SEMA3F-202ENST00000413852 COL9A1P20849 921 aa13.18□□□□□ -0.3
SEMA3F-202ENST00000413852 GRK6P43250 576 aa13.18□□□□□ -0.3
SEMA3F-202ENST00000413852 GLYATL3Q5SZD4 288 aa13.18□□□□□ -0.3
SEMA3F-202ENST00000413852 PDSS1Q5T2R2 415 aa13.18□□□□□ -0.3
SEMA3F-202ENST00000413852 CORO6Q6QEF8 472 aa13.18□□□□□ -0.3
SEMA3F-202ENST00000413852 KCTD9Q7L273 389 aa13.18□□□□□ -0.3
SEMA3F-202ENST00000413852 FAM122BQ7Z309 247 aa13.18□□□□□ -0.3
SEMA3F-202ENST00000413852 SAMD14Q8IZD0 417 aaPredicted RBP13.18□□□□□ -0.3
SEMA3F-202ENST00000413852 AVL9Q8NBF6 648 aa13.18□□□□□ -0.3
SEMA3F-202ENST00000413852 CLRN3Q8NCR9 226 aa13.18□□□□□ -0.3
SEMA3F-202ENST00000413852 C16orf52Q8NHV5 167 aa13.18□□□□□ -0.3
SEMA3F-202ENST00000413852 ROBO4Q8WZ75 1007 aa13.18□□□□□ -0.3
SEMA3F-202ENST00000413852 RBM18Q96H35 190 aaKnown RBP13.18□□□□□ -0.3
SEMA3F-202ENST00000413852 SLC6A7Q99884 636 aa13.18□□□□□ -0.3
SEMA3F-202ENST00000413852 NKX6-2Q9C056 277 aaPredicted RBP13.18□□□□□ -0.3
SEMA3F-202ENST00000413852 TAS2R4Q9NYW5 299 aa13.18□□□□□ -0.3
SEMA3F-202ENST00000413852 MRPS18BQ9Y676 258 aaKnown RBP13.18□□□□□ -0.3
SEMA3F-202ENST00000413852 OR6C76A6NM76 312 aa13.18□□□□□ -0.3
SEMA3F-202ENST00000413852 EEF1E1-BLOC1S5C9J1V9 151 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms